RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 XAGE1AQ9HD64 81 aa5.06□□□□□ -1.6
RTF1-205ENST00000558298 IGLV8-61A0A075B6I0 122 aa5.05□□□□□ -1.6
RTF1-205ENST00000558298 IGLV7-46A0A075B6I9 117 aa5.05□□□□□ -1.6
RTF1-205ENST00000558298 H0Y9P7 68 aa5.05□□□□□ -1.6
RTF1-205ENST00000558298 SPTSSBQ8NFR3 76 aa5.05□□□□□ -1.6
RTF1-205ENST00000558298 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
RTF1-205ENST00000558298 K7EQZ3 153 aa5.04□□□□□ -1.6
RTF1-205ENST00000558298 SPRR1AP35321 89 aa5.04□□□□□ -1.6
RTF1-205ENST00000558298 CASC2Q6XLA1 102 aa5.04□□□□□ -1.6
RTF1-205ENST00000558298 VPS13BQ7Z7G8 4022 aa5.03□□□□□ -1.6
RTF1-205ENST00000558298 DEFB105AQ8NG35 78 aa5.01□□□□□ -1.61
RTF1-205ENST00000558298 MYCBP2O75592 4640 aa5□□□□□ -1.61
RTF1-205ENST00000558298 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
RTF1-205ENST00000558298 COA5Q86WW8 74 aa5□□□□□ -1.61
RTF1-205ENST00000558298 ST20-AS1Q8NBB2 130 aa5□□□□□ -1.61
RTF1-205ENST00000558298 C7orf33Q8WU49 177 aa5□□□□□ -1.61
RTF1-205ENST00000558298 IGLV1-50A0A075B6I6 118 aa4.99□□□□□ -1.61
RTF1-205ENST00000558298 A8MWP4 228 aa4.99□□□□□ -1.61
RTF1-205ENST00000558298 KRTAP4-16G5E9R7 235 aaPredicted RBP4.99□□□□□ -1.61
RTF1-205ENST00000558298 SPACA4Q8TDM5 124 aa4.98□□□□□ -1.61
RTF1-205ENST00000558298 PLAC8Q9NZF1 115 aa4.98□□□□□ -1.61
RTF1-205ENST00000558298 HERC1Q15751 4861 aa4.98□□□□□ -1.61
RTF1-205ENST00000558298 SRRM2Q9UQ35 2752 aaKnown RBP4.97□□□□□ -1.61
RTF1-205ENST00000558298 MOBPQ13875 183 aa4.97□□□□□ -1.61
RTF1-205ENST00000558298 C4orf48Q5BLP8 95 aa4.97□□□□□ -1.61
RTF1-205ENST00000558298 Q5VSD8 79 aa4.96□□□□□ -1.62
RTF1-205ENST00000558298 CIRBP-AS1Q8TBR5 109 aa4.96□□□□□ -1.62
RTF1-205ENST00000558298 KRTAP10-4P60372 401 aaPredicted RBP4.95□□□□□ -1.62
RTF1-205ENST00000558298 RPL37AP61513 92 aaKnown RBP4.95□□□□□ -1.62
RTF1-205ENST00000558298 PRR4Q16378 134 aa4.95□□□□□ -1.62
RTF1-205ENST00000558298 REG3GQ6UW15 175 aa4.95□□□□□ -1.62
RTF1-205ENST00000558298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.95□□□□□ -1.62
RTF1-205ENST00000558298 H0Y9J4 135 aa4.94□□□□□ -1.62
RTF1-205ENST00000558298 WFDC13Q8IUB5 93 aa4.94□□□□□ -1.62
RTF1-205ENST00000558298 A0A096LNI7 61 aa4.93□□□□□ -1.62
RTF1-205ENST00000558298 PANO1I0J062 215 aa4.93□□□□□ -1.62
RTF1-205ENST00000558298 IGFL1Q6UW32 110 aa4.93□□□□□ -1.62
RTF1-205ENST00000558298 C8orf87E5RJ46 101 aa4.92□□□□□ -1.62
RTF1-205ENST00000558298 FAM229AH3BQW9 127 aa4.92□□□□□ -1.62
RTF1-205ENST00000558298 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
RTF1-205ENST00000558298 SPRR1BP22528 89 aa4.92□□□□□ -1.62
RTF1-205ENST00000558298 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
RTF1-205ENST00000558298 A0A087WSZ3 146 aa4.91□□□□□ -1.62
RTF1-205ENST00000558298 PLA2G1BP04054 148 aaKnown RBP4.91□□□□□ -1.62
RTF1-205ENST00000558298 FLG2Q5D862 2391 aaPredicted RBP4.9□□□□□ -1.62
RTF1-205ENST00000558298 CHTF8P0CG12 524 aa4.9□□□□□ -1.63
RTF1-205ENST00000558298 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.63
RTF1-205ENST00000558298 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
RTF1-205ENST00000558298 SERTAD4-AS1Q5TG53 156 aa4.89□□□□□ -1.63
RTF1-205ENST00000558298 LINC00472Q9H8W2 130 aa4.89□□□□□ -1.63
RTF1-205ENST00000558298 DMBT1Q9UGM3 2413 aaPredicted RBP4.89□□□□□ -1.63
RTF1-205ENST00000558298 IGKV2-24A0A0C4DH68 120 aa4.88□□□□□ -1.63
RTF1-205ENST00000558298 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
RTF1-205ENST00000558298 ACYP2P14621 99 aa4.87□□□□□ -1.63
RTF1-205ENST00000558298 SPAG11AQ6PDA7 123 aa4.87□□□□□ -1.63
RTF1-205ENST00000558298 RETNLBQ9BQ08 111 aa4.87□□□□□ -1.63
RTF1-205ENST00000558298 MMP24-AS1A0A0U1RRL7 71 aa4.86□□□□□ -1.63
RTF1-205ENST00000558298 A0A1W2PNN7 141 aa4.85□□□□□ -1.63
RTF1-205ENST00000558298 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.63
RTF1-205ENST00000558298 KRTAP7-1Q8IUC3 87 aa4.84□□□□□ -1.63
RTF1-205ENST00000558298 LINC00313P59037 77 aa4.83□□□□□ -1.64
RTF1-205ENST00000558298 A8MU10 97 aa4.81□□□□□ -1.64
RTF1-205ENST00000558298 UQCR11O14957 56 aa4.81□□□□□ -1.64
RTF1-205ENST00000558298 HRES1P13985 223 aa4.81□□□□□ -1.64
RTF1-205ENST00000558298 SPATA8Q6RVD6 105 aa4.81□□□□□ -1.64
RTF1-205ENST00000558298 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
RTF1-205ENST00000558298 SPINK7P58062 85 aa4.8□□□□□ -1.64
RTF1-205ENST00000558298 SPINK6Q6UWN8 80 aa4.8□□□□□ -1.64
RTF1-205ENST00000558298 C8orf17Q9NRJ1 99 aa4.8□□□□□ -1.64
RTF1-205ENST00000558298 ZNF706Q9Y5V0 76 aaPredicted RBP4.8□□□□□ -1.64
RTF1-205ENST00000558298 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
RTF1-205ENST00000558298 PSORS1C2Q9UIG4 136 aa4.79□□□□□ -1.64
RTF1-205ENST00000558298 TNXBP22105 4242 aa4.78□□□□□ -1.64
RTF1-205ENST00000558298 A0A1B0GU69 56 aa4.78□□□□□ -1.64
RTF1-205ENST00000558298 A0A1B0GVX0 72 aa4.78□□□□□ -1.64
RTF1-205ENST00000558298 DEFB116Q30KQ4 102 aa4.78□□□□□ -1.64
RTF1-205ENST00000558298 PCOTHQ58A44 107 aa4.78□□□□□ -1.64
RTF1-205ENST00000558298 IGLV7-43P04211 117 aa4.76□□□□□ -1.65
RTF1-205ENST00000558298 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
RTF1-205ENST00000558298 KRTAP11-1Q8IUC1 163 aa4.76□□□□□ -1.65
RTF1-205ENST00000558298 PRR26Q8N8Z3 221 aa4.76□□□□□ -1.65
RTF1-205ENST00000558298 H3BS24 57 aa4.75□□□□□ -1.65
RTF1-205ENST00000558298 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
RTF1-205ENST00000558298 DMAC1Q96GE9 116 aa4.75□□□□□ -1.65
RTF1-205ENST00000558298 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
RTF1-205ENST00000558298 IGHV6-1A0A0B4J1U7 121 aa4.73□□□□□ -1.65
RTF1-205ENST00000558298 J3QL48 77 aa4.73□□□□□ -1.65
RTF1-205ENST00000558298 ZNF861PO60384 105 aa4.73□□□□□ -1.65
RTF1-205ENST00000558298 PRLHP81277 87 aa4.72□□□□□ -1.65
RTF1-205ENST00000558298 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.65
RTF1-205ENST00000558298 KRTAP1-4P0C5Y4 121 aa4.71□□□□□ -1.66
RTF1-205ENST00000558298 LINC00483Q53H64 154 aa4.71□□□□□ -1.66
RTF1-205ENST00000558298 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
RTF1-205ENST00000558298 Q96NJ1 140 aa4.69□□□□□ -1.66
RTF1-205ENST00000558298 LRP2P98164 4655 aa4.65□□□□□ -1.67
RTF1-205ENST00000558298 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
RTF1-205ENST00000558298 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
RTF1-205ENST00000558298 NOTCH2NLQ7Z3S9 236 aa4.63□□□□□ -1.67
RTF1-205ENST00000558298 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
RTF1-205ENST00000558298 KRTAP3-2Q9BYR7 98 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms