RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 PMCHL1Q16048 86 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 SPATA45Q537H7 98 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 Q5BKY6 102 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 BVES-AS1Q5T3Y7 98 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 Q5VV11 94 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 C20orf197Q8N268 126 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 TOMM5Q8N4H5 51 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 HIGD1BQ9P298 99 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 V9GYH0 126 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 RPL37AP61513 92 aaKnown RBP2.08□□□□□ -2.08
LRRC28-205ENST00000558248 TMEM170BQ5T4T1 132 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 FAM74A4Q5TZK3 123 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 Q86TA4 180 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 SMIM4Q8WVI0 70 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 S100ZQ8WXG8 99 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 CDC42SE2Q9NRR3 84 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 LENEPQ9Y5L5 61 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 SNURFQ9Y675 71 aa2.08□□□□□ -2.08
LRRC28-205ENST00000558248 TRBV25-1A0A075B6N4 114 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 TRBV6-7A0A0A0MS04 114 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 TRBV6-5A0A0K0K1A5 114 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 DNAL4O96015 105 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 CFDP00746 253 aaPredicted RBP2.07□□□□□ -2.08
LRRC28-205ENST00000558248 PSMG4Q5JS54 123 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 LINC00643Q86TS7 51 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 COX7B2Q8TF08 81 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 FXYD6Q9H0Q3 95 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 CYSTM1Q9H1C7 97 aa2.07□□□□□ -2.08
LRRC28-205ENST00000558248 TNXBP22105 4242 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 LOC101927531A0A1B0GV80 90 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 F2Z2F3 143 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 PPP1R17O96001 155 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 DEFB1P60022 68 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 SPAG11BQ08648 103 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 GDF5OSQ5U4N7 250 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 SPAG11AQ6PDA7 123 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 C18orf32Q8TCD1 76 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 NDUFA4L2Q9NRX3 87 aa2.06□□□□□ -2.08
LRRC28-205ENST00000558248 A0A096LPF7 62 aa2.05□□□□□ -2.08
LRRC28-205ENST00000558248 ZNF815PA8K554 130 aa2.05□□□□□ -2.08
LRRC28-205ENST00000558248 H3BUT2 72 aa2.05□□□□□ -2.08
LRRC28-205ENST00000558248 K7EIM0 57 aa2.05□□□□□ -2.08
LRRC28-205ENST00000558248 TMEM167AQ8TBQ9 72 aa2.05□□□□□ -2.08
LRRC28-205ENST00000558248 AMELXQ99217 191 aa2.05□□□□□ -2.08
LRRC28-205ENST00000558248 LPAP08519 4548 aa2.05□□□□□ -2.08
LRRC28-205ENST00000558248 LOC110117498A0A087WWA1 95 aa2.04□□□□□ -2.08
LRRC28-205ENST00000558248 H3BNG1 76 aa2.04□□□□□ -2.08
LRRC28-205ENST00000558248 WT1-ASQ06250 92 aa2.04□□□□□ -2.08
LRRC28-205ENST00000558248 SPINK9Q5DT21 86 aa2.04□□□□□ -2.08
LRRC28-205ENST00000558248 SFTA2Q6UW10 78 aa2.04□□□□□ -2.08
LRRC28-205ENST00000558248 IGKV2-40A0A087WW87 121 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-205ENST00000558248 IGKV3D-7A0A0C4DH55 119 aa2.03□□□□□ -2.08
LRRC28-205ENST00000558248 IGKV3OR2-268A0A0C4DH90 116 aa2.03□□□□□ -2.08
LRRC28-205ENST00000558248 CEBPZOSA8MTT3 80 aa2.03□□□□□ -2.08
LRRC28-205ENST00000558248 IGKV2D-40P01614 121 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-205ENST00000558248 IAPPP10997 89 aa2.03□□□□□ -2.08
LRRC28-205ENST00000558248 V9GYV3 84 aa2.03□□□□□ -2.08
LRRC28-205ENST00000558248 I3L2K1 104 aa2.02□□□□□ -2.09
LRRC28-205ENST00000558248 CFAP126Q5VTH2 177 aa2.02□□□□□ -2.09
LRRC28-205ENST00000558248 WFDC10BQ8IUB3 73 aa2.02□□□□□ -2.09
LRRC28-205ENST00000558248 NOP10Q9NPE3 64 aaKnown RBP2.02□□□□□ -2.09
LRRC28-205ENST00000558248 TIMM8BQ9Y5J9 83 aaPredicted RBP2.02□□□□□ -2.09
LRRC28-205ENST00000558248 ARL2-SNX15V9GYD0 113 aa2.02□□□□□ -2.09
LRRC28-205ENST00000558248 TRGV2A0A075B6R0 118 aa2.01□□□□□ -2.09
LRRC28-205ENST00000558248 SNRPGP15A8MWD9 76 aa2.01□□□□□ -2.09
LRRC28-205ENST00000558248 F8VRH5 84 aa2.01□□□□□ -2.09
LRRC28-205ENST00000558248 SMIM13P0DJ93 91 aa2.01□□□□□ -2.09
LRRC28-205ENST00000558248 HTN1P15515 57 aa2.01□□□□□ -2.09
LRRC28-205ENST00000558248 ZNF625Q96I27 306 aaPredicted RBP2.01□□□□□ -2.09
LRRC28-205ENST00000558248 PSENENQ9NZ42 101 aa2.01□□□□□ -2.09
LRRC28-205ENST00000558248 DNAH8Q96JB1 4490 aa2□□□□□ -2.09
LRRC28-205ENST00000558248 KRTAP5-8O75690 187 aa2□□□□□ -2.09
LRRC28-205ENST00000558248 IGKV1-17P01599 117 aa2□□□□□ -2.09
LRRC28-205ENST00000558248 PRCDQ00LT1 54 aa2□□□□□ -2.09
LRRC28-205ENST00000558248 SPINK13Q1W4C9 94 aa2□□□□□ -2.09
LRRC28-205ENST00000558248 FXYD6-FXYD2A0A087WZ82 144 aa1.99□□□□□ -2.09
LRRC28-205ENST00000558248 IGKV2-29A2NJV5 120 aaPredicted RBP1.99□□□□□ -2.09
LRRC28-205ENST00000558248 NMES1Q9C002 83 aa1.99□□□□□ -2.09
LRRC28-205ENST00000558248 LINC01558Q9Y6Z2 57 aa1.99□□□□□ -2.09
LRRC28-205ENST00000558248 A8MTW9 85 aa1.98□□□□□ -2.09
LRRC28-205ENST00000558248 F8WEM9 126 aa1.98□□□□□ -2.09
LRRC28-205ENST00000558248 BAGE3Q86Y29 109 aa1.98□□□□□ -2.09
LRRC28-205ENST00000558248 BAGE2Q86Y30 109 aa1.98□□□□□ -2.09
LRRC28-205ENST00000558248 LINC00208Q96KT6 92 aa1.98□□□□□ -2.09
LRRC28-205ENST00000558248 MYMXA0A1B0GTQ4 84 aa1.97□□□□□ -2.09
LRRC28-205ENST00000558248 C7orf77A4D0Y5 90 aa1.97□□□□□ -2.09
LRRC28-205ENST00000558248 UMAD1C9J7I0 102 aa1.97□□□□□ -2.09
LRRC28-205ENST00000558248 UQCR11O14957 56 aa1.97□□□□□ -2.09
LRRC28-205ENST00000558248 TMEM263Q8WUH6 116 aaKnown RBP1.97□□□□□ -2.09
LRRC28-205ENST00000558248 LEPROTL1O95214 131 aa1.96□□□□□ -2.1
LRRC28-205ENST00000558248 ARMS2P0C7Q2 107 aa1.96□□□□□ -2.1
LRRC28-205ENST00000558248 LINC01556Q5JQF7 62 aa1.96□□□□□ -2.1
LRRC28-205ENST00000558248 PRO0255Q9UI72 69 aa1.96□□□□□ -2.1
LRRC28-205ENST00000558248 TRGV1A0A0A0MS02 117 aa1.95□□□□□ -2.1
LRRC28-205ENST00000558248 CTXND1A0A1B0GTU2 59 aa1.95□□□□□ -2.1
LRRC28-205ENST00000558248 D6R8Y8 96 aa1.95□□□□□ -2.1
LRRC28-205ENST00000558248 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
LRRC28-205ENST00000558248 C10orf113Q5VZT2 155 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms