RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 NCR2O95944 276 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 DNAL4O96015 105 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 Q0VG73 95 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 CLLU1Q5K131 121 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 SPANXN1Q5VSR9 72 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 ENHOQ6UWT2 76 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 TSKUQ8WUA8 353 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 DPH3Q96FX2 82 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 V9GYV3 84 aa1.98□□□□□ -2.09
MTHFD1-216ENST00000557539 IGKV3D-7A0A0C4DH55 119 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 IGKV3OR2-268A0A0C4DH90 116 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 FAM236AA0A1B0GUQ0 79 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 FAM236BA0A1B0GV22 79 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 SMIM27A0A1W2PRY6 76 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 POLR2KP53803 58 aaKnown RBP1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 FAM74A4Q5TZK3 123 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 UNQ6190/PRO20217Q6UXQ8 127 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 SMIM7Q9BQ49 75 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 TMEM191AQ9H0A3 160 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 ERG28Q9UKR5 140 aa1.97□□□□□ -2.09
MTHFD1-216ENST00000557539 TRBV25-1A0A075B6N4 114 aa1.96□□□□□ -2.1
MTHFD1-216ENST00000557539 A0A1B0GUT8 65 aa1.96□□□□□ -2.1
MTHFD1-216ENST00000557539 A6NN06 94 aa1.96□□□□□ -2.1
MTHFD1-216ENST00000557539 HIGD1CA8MV81 97 aa1.96□□□□□ -2.1
MTHFD1-216ENST00000557539 NUPR1O60356 82 aa1.96□□□□□ -2.1
MTHFD1-216ENST00000557539 ZNF25P17030 456 aaPredicted RBP1.96□□□□□ -2.1
MTHFD1-216ENST00000557539 ZNF56Q15929 161 aa1.96□□□□□ -2.1
MTHFD1-216ENST00000557539 CCL25O15444 150 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 PPP1R17O96001 155 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 IGHV3-30P01768 117 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 IGHV3-33P01772 117 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 IGHV3-30-5P0DP03 117 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 PEA15Q15121 130 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 C20orf78Q9BR46 151 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 CYSTM1Q9H1C7 97 aa1.95□□□□□ -2.1
MTHFD1-216ENST00000557539 LOC110117498A0A087WWA1 95 aa1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 GVQW2A0A096LPI5 108 aaPredicted RBP1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 I3L3M4 83 aa1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 K7EMI3 77 aa1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 INE1O15225 51 aa1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 RPL39LQ96EH5 51 aaKnown RBP1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 TMEM242Q9NWH2 141 aa1.94□□□□□ -2.1
MTHFD1-216ENST00000557539 LINC01546A6NGU7 62 aa1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 ANGP03950 147 aaKnown RBP1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 S100A8P05109 93 aa1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 MGPP08493 103 aa1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 ADCYAP1P18509 176 aa1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 UBE2D1P51668 147 aa1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 ST20Q9HBF5 79 aa1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 UBE2D4Q9Y2X8 147 aa1.93□□□□□ -2.1
MTHFD1-216ENST00000557539 LINC00959A0A1B0GUT2 108 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 TMEM218A2RU14 115 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 C7orf77A4D0Y5 90 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 TMEM262E9PQX1 116 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 ADIRFQ15847 76 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 SMIM2Q9BVW6 85 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 SEC11CQ9BY50 192 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 PLAC8Q9NZF1 115 aa1.92□□□□□ -2.1
MTHFD1-216ENST00000557539 IGIPA6NJ69 53 aa1.91□□□□□ -2.1
MTHFD1-216ENST00000557539 D6R8Y8 96 aa1.91□□□□□ -2.1
MTHFD1-216ENST00000557539 OBSCN-AS1Q96MR7 158 aa1.91□□□□□ -2.1
MTHFD1-216ENST00000557539 AMELXQ99217 191 aa1.91□□□□□ -2.1
MTHFD1-216ENST00000557539 TRBV20-1A0A075B6N2 111 aa1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 JMJD7-PLA2G4BH0Y9G9 81 aa1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 Q8N8P6 123 aa1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 LIMD2Q9BT23 127 aa1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 MRPL35Q9NZE8 188 aaKnown RBP1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
MTHFD1-216ENST00000557539 LINC01549A6NIU2 74 aa1.89□□□□□ -2.11
MTHFD1-216ENST00000557539 FCER1GP30273 86 aa1.89□□□□□ -2.11
MTHFD1-216ENST00000557539 MRPL54Q6P161 138 aaKnown RBP1.89□□□□□ -2.11
MTHFD1-216ENST00000557539 CLPSL2Q6UWE3 100 aa1.89□□□□□ -2.11
MTHFD1-216ENST00000557539 Q6ZUT4 128 aa1.89□□□□□ -2.11
MTHFD1-216ENST00000557539 NXT2Q9NPJ8 142 aaKnown RBP1.89□□□□□ -2.11
MTHFD1-216ENST00000557539 TRAV23DV6A0A075B6W5 121 aa1.88□□□□□ -2.11
MTHFD1-216ENST00000557539 A0A096LNI7 61 aa1.88□□□□□ -2.11
MTHFD1-216ENST00000557539 IFI27P40305 119 aaPredicted RBP1.88□□□□□ -2.11
MTHFD1-216ENST00000557539 RPL39P62891 51 aaKnown RBP1.88□□□□□ -2.11
MTHFD1-216ENST00000557539 COX6A2Q02221 97 aa1.88□□□□□ -2.11
MTHFD1-216ENST00000557539 TMEM141Q96I45 108 aa1.88□□□□□ -2.11
MTHFD1-216ENST00000557539 TRBV30A0A0K0K1B3 111 aa1.87□□□□□ -2.11
MTHFD1-216ENST00000557539 A0A1B0GV90 55 aa1.87□□□□□ -2.11
MTHFD1-216ENST00000557539 SEC11AP67812 179 aa1.87□□□□□ -2.11
MTHFD1-216ENST00000557539 Q8IZM0 81 aa1.87□□□□□ -2.11
MTHFD1-216ENST00000557539 SPAG11BQ08648 103 aa1.86□□□□□ -2.11
MTHFD1-216ENST00000557539 CSAG1Q6PB30 78 aa1.86□□□□□ -2.11
MTHFD1-216ENST00000557539 ATP11AUNQ6ZP68 121 aa1.86□□□□□ -2.11
MTHFD1-216ENST00000557539 ATOH7Q8N100 152 aa1.86□□□□□ -2.11
MTHFD1-216ENST00000557539 SVBPQ8N300 66 aa1.86□□□□□ -2.11
MTHFD1-216ENST00000557539 C2orf88Q9BSF0 95 aa1.86□□□□□ -2.11
MTHFD1-216ENST00000557539 C6orf48Q9UBA6 75 aa1.86□□□□□ -2.11
MTHFD1-216ENST00000557539 NDUFA1O15239 70 aa1.85□□□□□ -2.11
MTHFD1-216ENST00000557539 IGKCP01834 107 aa1.85□□□□□ -2.11
MTHFD1-216ENST00000557539 IGLC3P0DOY3 106 aa1.85□□□□□ -2.11
MTHFD1-216ENST00000557539 S100PP25815 95 aa1.85□□□□□ -2.11
MTHFD1-216ENST00000557539 C5orf38Q86SI9 138 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms