RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 PDE6GP18545 87 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 KRTAP10-1P60331 282 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 HAMPP81172 84 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 PRCDQ00LT1 54 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 HIGD2AQ9BW72 106 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 HERC2O95714 4834 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 LOC110117498A0A087WWA1 95 aa2.27□□□□□ -2.05
PRPF39-212ENST00000557477 IGHV3-21A0A0B4J1V1 117 aa2.27□□□□□ -2.05
PRPF39-212ENST00000557477 ROMO1P60602 79 aa2.27□□□□□ -2.05
PRPF39-212ENST00000557477 LINC00308Q8TCZ7 52 aa2.27□□□□□ -2.05
PRPF39-212ENST00000557477 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
PRPF39-212ENST00000557477 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
PRPF39-212ENST00000557477 APLNQ9ULZ1 77 aa2.27□□□□□ -2.05
PRPF39-212ENST00000557477 HECTD4Q9Y4D8 3996 aa2.26□□□□□ -2.05
PRPF39-212ENST00000557477 TNCP24821 2201 aa2.26□□□□□ -2.05
PRPF39-212ENST00000557477 NDUFA1O15239 70 aa2.26□□□□□ -2.05
PRPF39-212ENST00000557477 P0C880 135 aa2.26□□□□□ -2.05
PRPF39-212ENST00000557477 DEFB131AP59861 70 aa2.26□□□□□ -2.05
PRPF39-212ENST00000557477 ERHP84090 104 aaKnown RBP2.26□□□□□ -2.05
PRPF39-212ENST00000557477 KRTAP25-1Q3LHN0 102 aa2.26□□□□□ -2.05
PRPF39-212ENST00000557477 ZFAND2AQ8N6M9 145 aa2.26□□□□□ -2.05
PRPF39-212ENST00000557477 IGHV3-64A0A075B6Q5 118 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 IGKV1D-37A0A075B6S9 117 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 IGHV3-73A0A0B4J1V6 119 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 A8MWP4 228 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 K7ERS5 55 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 LECT2O14960 151 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 KLK9Q2XQG4 91 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 Q6ZQT0 140 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 RHPN1-AS1Q9BWJ2 59 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 KLK9Q9UKQ9 250 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 LINC01558Q9Y6Z2 57 aa2.25□□□□□ -2.05
PRPF39-212ENST00000557477 IGKV2-29A2NJV5 120 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-212ENST00000557477 NDUFA4O00483 81 aa2.24□□□□□ -2.05
PRPF39-212ENST00000557477 IGLV6-57P01721 117 aa2.24□□□□□ -2.05
PRPF39-212ENST00000557477 SPART-AS1P0CW21 52 aa2.24□□□□□ -2.05
PRPF39-212ENST00000557477 Q8NAQ8 132 aa2.24□□□□□ -2.05
PRPF39-212ENST00000557477 PLAC8Q9NZF1 115 aa2.24□□□□□ -2.05
PRPF39-212ENST00000557477 LENEPQ9Y5L5 61 aa2.24□□□□□ -2.05
PRPF39-212ENST00000557477 A0A1W2PNM2 257 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 H3BRN7 92 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 IGHV3-53P01767 116 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 CCL18P55774 89 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 SPAG11BQ08648 103 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 Q5VSD8 79 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 CSAG1Q6PB30 78 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 SPAG11AQ6PDA7 123 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 Q8NDZ9 215 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 COX7B2Q8TF08 81 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 KIAA1109Q2LD37 5005 aa2.23□□□□□ -2.05
PRPF39-212ENST00000557477 PLECQ15149 4684 aaKnown RBP2.22□□□□□ -2.05
PRPF39-212ENST00000557477 RYR1P21817 5038 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 NBDYA0A0U1RRE5 68 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 MGPP08493 103 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 DEFB130BP0DP73 79 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 DEFB130AP0DP74 79 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 POLR2KP53803 58 aaKnown RBP2.22□□□□□ -2.05
PRPF39-212ENST00000557477 CNBPP62633 177 aaKnown RBP2.22□□□□□ -2.05
PRPF39-212ENST00000557477 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 TMEM167AQ8TBQ9 72 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 SMIM11BQ8TCY0 68 aa2.22□□□□□ -2.05
PRPF39-212ENST00000557477 RPL39LQ96EH5 51 aaKnown RBP2.22□□□□□ -2.05
PRPF39-212ENST00000557477 IGKV2-40A0A087WW87 121 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-212ENST00000557477 ETDCA0A1B0GVM5 59 aa2.21□□□□□ -2.06
PRPF39-212ENST00000557477 H3BPC8 53 aa2.21□□□□□ -2.06
PRPF39-212ENST00000557477 IGKV2D-40P01614 121 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-212ENST00000557477 HTN1P15515 57 aa2.21□□□□□ -2.06
PRPF39-212ENST00000557477 RPL39P62891 51 aaKnown RBP2.21□□□□□ -2.06
PRPF39-212ENST00000557477 KMT2AQ03164 3969 aa2.21□□□□□ -2.06
PRPF39-212ENST00000557477 Q6ZTI0 123 aa2.21□□□□□ -2.06
PRPF39-212ENST00000557477 TRGV2A0A075B6R0 118 aa2.2□□□□□ -2.06
PRPF39-212ENST00000557477 H0Y9P7 68 aa2.2□□□□□ -2.06
PRPF39-212ENST00000557477 SMR3BP02814 79 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-212ENST00000557477 SPINK7P58062 85 aa2.2□□□□□ -2.06
PRPF39-212ENST00000557477 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
PRPF39-212ENST00000557477 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
PRPF39-212ENST00000557477 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-212ENST00000557477 MUC4Q99102 2169 aa2.19□□□□□ -2.06
PRPF39-212ENST00000557477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-212ENST00000557477 K7EIM0 57 aa2.19□□□□□ -2.06
PRPF39-212ENST00000557477 WT1-ASQ06250 92 aa2.19□□□□□ -2.06
PRPF39-212ENST00000557477 COA5Q86WW8 74 aa2.19□□□□□ -2.06
PRPF39-212ENST00000557477 Q8TAT8 98 aa2.19□□□□□ -2.06
PRPF39-212ENST00000557477 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
PRPF39-212ENST00000557477 A0A087WSZ3 146 aa2.18□□□□□ -2.06
PRPF39-212ENST00000557477 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.18□□□□□ -2.06
PRPF39-212ENST00000557477 KCNQ1DNQ9H478 68 aa2.18□□□□□ -2.06
PRPF39-212ENST00000557477 I3L2K1 104 aa2.17□□□□□ -2.06
PRPF39-212ENST00000557477 DEFB1P60022 68 aa2.17□□□□□ -2.06
PRPF39-212ENST00000557477 SPINK13Q1W4C9 94 aa2.17□□□□□ -2.06
PRPF39-212ENST00000557477 A0A096LPF7 62 aa2.16□□□□□ -2.06
PRPF39-212ENST00000557477 TRGV4A0A0C4DH28 118 aa2.16□□□□□ -2.06
PRPF39-212ENST00000557477 COX7BP24311 80 aa2.16□□□□□ -2.06
PRPF39-212ENST00000557477 SPATA8Q6RVD6 105 aa2.16□□□□□ -2.06
PRPF39-212ENST00000557477 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
PRPF39-212ENST00000557477 NOP10Q9NPE3 64 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms