RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 P0C880 135 aa1.6□□□□□ -2.15
VRK1-207ENST00000557352 PDE6GP18545 87 aa1.6□□□□□ -2.15
VRK1-207ENST00000557352 COX7BP24311 80 aa1.6□□□□□ -2.15
VRK1-207ENST00000557352 ETDBQ3ZM63 59 aa1.6□□□□□ -2.15
VRK1-207ENST00000557352 SACSQ9NZJ4 4579 aa1.6□□□□□ -2.15
VRK1-207ENST00000557352 HYDINQ4G0P3 5121 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 LOC110117498A0A087WWA1 95 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 ETDCA0A1B0GVM5 59 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 A0A1W2PNN7 141 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 BCE1O60756 84 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 ACYP1P07311 99 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 BAALC-AS2P0C853 105 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 SPRR1BP22528 89 aa1.59□□□□□ -2.15
VRK1-207ENST00000557352 FAM19A5Q7Z5A7 132 aaPredicted RBP1.59□□□□□ -2.15
VRK1-207ENST00000557352 VPS13BQ7Z7G8 4022 aa1.59□□□□□ -2.16
VRK1-207ENST00000557352 DNAH11Q96DT5 4516 aa1.58□□□□□ -2.16
VRK1-207ENST00000557352 TRBV7-4A0A0J9YYF1 115 aa1.58□□□□□ -2.16
VRK1-207ENST00000557352 RPL37AP61513 92 aaKnown RBP1.58□□□□□ -2.16
VRK1-207ENST00000557352 Q6ZQY7 126 aa1.58□□□□□ -2.16
VRK1-207ENST00000557352 SMCR5Q8TEV8 140 aa1.58□□□□□ -2.16
VRK1-207ENST00000557352 Q9BRP9 147 aa1.58□□□□□ -2.16
VRK1-207ENST00000557352 DNAH8Q96JB1 4490 aa1.58□□□□□ -2.16
VRK1-207ENST00000557352 DNAH5Q8TE73 4624 aa1.58□□□□□ -2.16
VRK1-207ENST00000557352 TEX49A0A1B0GTD5 131 aa1.57□□□□□ -2.16
VRK1-207ENST00000557352 OXTP01178 125 aa1.57□□□□□ -2.16
VRK1-207ENST00000557352 UBE2BP63146 152 aa1.57□□□□□ -2.16
VRK1-207ENST00000557352 RBM3P98179 157 aaKnown RBP1.57□□□□□ -2.16
VRK1-207ENST00000557352 Q6JHZ5 121 aa1.57□□□□□ -2.16
VRK1-207ENST00000557352 Q6Q795 121 aa1.57□□□□□ -2.16
VRK1-207ENST00000557352 PHF5AQ7RTV0 110 aaKnown RBP1.57□□□□□ -2.16
VRK1-207ENST00000557352 ZNF706Q9Y5V0 76 aaPredicted RBP1.57□□□□□ -2.16
VRK1-207ENST00000557352 KMT2CQ8NEZ4 4911 aaKnown RBP1.56□□□□□ -2.16
VRK1-207ENST00000557352 CCKP06307 115 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 ATP5EP2Q5VTU8 51 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 Q6ZQT0 140 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 SCXQ7RTU7 201 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 FAM19A1Q7Z5A9 133 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 SPRR4Q96PI1 79 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 DSCR8Q96T75 97 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 PSORS1C2Q9UIG4 136 aa1.56□□□□□ -2.16
VRK1-207ENST00000557352 RYR2Q92736 4967 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 IGHV6-1A0A0B4J1U7 121 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 TRBV7-7A0A0K0K1E9 115 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 ERC2-IT1O76042 136 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 PRLHP81277 87 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 FAM229BQ4G0N7 80 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 IMUPQ9GZP8 106 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 C14orf132Q9NPU4 83 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 LAMTOR3Q9UHA4 124 aa1.55□□□□□ -2.16
VRK1-207ENST00000557352 PKHD1L1Q86WI1 4243 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 FLG2Q5D862 2391 aaPredicted RBP1.54□□□□□ -2.16
VRK1-207ENST00000557352 F8WEM9 126 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 SCGB1A1P11684 91 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 CRYGAP11844 174 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 FUSP35637 526 aaKnown RBP eCLIP1.54□□□□□ -2.16
VRK1-207ENST00000557352 CD164Q04900 197 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 KRTAP13-4Q3LI77 160 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 C1orf137Q5JT78 98 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 SPINK6Q6UWN8 80 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 LINC00643Q86TS7 51 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 DPH3Q96FX2 82 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 HIGD2AQ9BW72 106 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 LRP1BQ9NZR2 4599 aa1.54□□□□□ -2.16
VRK1-207ENST00000557352 NDUFS5O43920 106 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 KRTAP10-4P60372 401 aaPredicted RBP1.53□□□□□ -2.16
VRK1-207ENST00000557352 RPS29P62273 56 aaKnown RBP1.53□□□□□ -2.16
VRK1-207ENST00000557352 ASB16-AS1Q495Z4 193 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 Q5XG85 94 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 SSBP3-AS1Q7Z2R9 100 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 ADM2Q7Z4H4 148 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 VPS25Q9BRG1 176 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 UBL5Q9BZL1 73 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 LINC00846Q9NV44 126 aa1.53□□□□□ -2.16
VRK1-207ENST00000557352 A0A1W2PNM2 257 aa1.52□□□□□ -2.17
VRK1-207ENST00000557352 C3orf22Q8N5N4 141 aa1.52□□□□□ -2.17
VRK1-207ENST00000557352 DEFB105AQ8NG35 78 aa1.52□□□□□ -2.17
VRK1-207ENST00000557352 SIGMAR1Q99720 223 aa1.52□□□□□ -2.17
VRK1-207ENST00000557352 SS18L2Q9UHA2 77 aa1.52□□□□□ -2.17
VRK1-207ENST00000557352 PRO0628Q9UI54 55 aa1.52□□□□□ -2.17
VRK1-207ENST00000557352 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
VRK1-207ENST00000557352 APOBP04114 4563 aaKnown RBP1.52□□□□□ -2.17
VRK1-207ENST00000557352 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
VRK1-207ENST00000557352 J3KT08 172 aa1.51□□□□□ -2.17
VRK1-207ENST00000557352 HRES1P13985 223 aa1.51□□□□□ -2.17
VRK1-207ENST00000557352 HIST1H4AP62805 103 aaKnown RBP1.51□□□□□ -2.17
VRK1-207ENST00000557352 HSPG2P98160 4391 aa1.5□□□□□ -2.17
VRK1-207ENST00000557352 MT-ATP8P03928 68 aa1.5□□□□□ -2.17
VRK1-207ENST00000557352 NREPQ16612 68 aa1.5□□□□□ -2.17
VRK1-207ENST00000557352 SPAG11AQ6PDA7 123 aa1.5□□□□□ -2.17
VRK1-207ENST00000557352 LINC00472Q9H8W2 130 aa1.5□□□□□ -2.17
VRK1-207ENST00000557352 A0A087WSZ3 146 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 SPINK1P00995 79 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 C9orf153Q5TBE3 101 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 SMIM20Q8N5G0 67 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 Q96NJ1 140 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 LIMD2Q9BT23 127 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 R4GN34 69 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 RYR3Q15413 4870 aa1.49□□□□□ -2.17
VRK1-207ENST00000557352 A0A1B0GV72 72 aa1.48□□□□□ -2.17
VRK1-207ENST00000557352 A8MWP4 228 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms