RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
TMEM55B-207ENST00000557041 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
TMEM55B-207ENST00000557041 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
TMEM55B-207ENST00000557041 LINC00483Q53H64 154 aa9.05□□□□□ -0.96
TMEM55B-207ENST00000557041 Q96NJ1 140 aa9.04□□□□□ -0.96
TMEM55B-207ENST00000557041 COA5Q86WW8 74 aa9.04□□□□□ -0.96
TMEM55B-207ENST00000557041 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
TMEM55B-207ENST00000557041 SSBP3-AS1Q7Z2R9 100 aa9.03□□□□□ -0.96
TMEM55B-207ENST00000557041 H3BPC8 53 aa9.01□□□□□ -0.97
TMEM55B-207ENST00000557041 A6NED7 52 aa9.01□□□□□ -0.97
TMEM55B-207ENST00000557041 CD164Q04900 197 aa9.01□□□□□ -0.97
TMEM55B-207ENST00000557041 PRO0628Q9UI54 55 aa8.99□□□□□ -0.97
TMEM55B-207ENST00000557041 LCE6AA0A183 80 aa8.99□□□□□ -0.97
TMEM55B-207ENST00000557041 FRAS1Q86XX4 4008 aa8.99□□□□□ -0.97
TMEM55B-207ENST00000557041 DNAH11Q96DT5 4516 aa8.99□□□□□ -0.97
TMEM55B-207ENST00000557041 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
TMEM55B-207ENST00000557041 PRR26Q8N8Z3 221 aa8.97□□□□□ -0.97
TMEM55B-207ENST00000557041 SPINK1P00995 79 aa8.96□□□□□ -0.97
TMEM55B-207ENST00000557041 Q5W150 140 aa8.96□□□□□ -0.98
TMEM55B-207ENST00000557041 CYP4F30PQ9H0H9 118 aa8.94□□□□□ -0.98
TMEM55B-207ENST00000557041 V9GYY9 64 aa8.93□□□□□ -0.98
TMEM55B-207ENST00000557041 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
TMEM55B-207ENST00000557041 LIMD2Q9BT23 127 aa8.92□□□□□ -0.98
TMEM55B-207ENST00000557041 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
TMEM55B-207ENST00000557041 VPS13DQ5THJ4 4388 aa8.92□□□□□ -0.98
TMEM55B-207ENST00000557041 C1orf195Q5TG92 126 aa8.91□□□□□ -0.98
TMEM55B-207ENST00000557041 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
TMEM55B-207ENST00000557041 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
TMEM55B-207ENST00000557041 LOC101927531A0A1B0GV80 90 aa8.89□□□□□ -0.99
TMEM55B-207ENST00000557041 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
TMEM55B-207ENST00000557041 C8orf87E5RJ46 101 aa8.86□□□□□ -0.99
TMEM55B-207ENST00000557041 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
TMEM55B-207ENST00000557041 LINC00304Q8N9R0 145 aa8.85□□□□□ -0.99
TMEM55B-207ENST00000557041 DNAH6Q9C0G6 4158 aa8.84□□□□□ -0.99
TMEM55B-207ENST00000557041 Q1T7F1 81 aa8.84□□□□□ -0.99
TMEM55B-207ENST00000557041 PMAIP1Q13794 54 aa8.84□□□□□ -1
TMEM55B-207ENST00000557041 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
TMEM55B-207ENST00000557041 A8MU10 97 aa8.83□□□□□ -1
TMEM55B-207ENST00000557041 HRES1P13985 223 aa8.82□□□□□ -1
TMEM55B-207ENST00000557041 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
TMEM55B-207ENST00000557041 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
TMEM55B-207ENST00000557041 ACYP2P14621 99 aa8.81□□□□□ -1
TMEM55B-207ENST00000557041 HECTD4Q9Y4D8 3996 aa8.79□□□□□ -1
TMEM55B-207ENST00000557041 Q8N1X5 172 aa8.79□□□□□ -1
TMEM55B-207ENST00000557041 LRP1BQ9NZR2 4599 aa8.78□□□□□ -1
TMEM55B-207ENST00000557041 Q5VV11 94 aa8.77□□□□□ -1.01
TMEM55B-207ENST00000557041 Q6ZSA8 131 aa8.74□□□□□ -1.01
TMEM55B-207ENST00000557041 KRTAP1-4P0C5Y4 121 aa8.73□□□□□ -1.01
TMEM55B-207ENST00000557041 HYDINQ4G0P3 5121 aa8.7□□□□□ -1.02
TMEM55B-207ENST00000557041 ASB16-AS1Q495Z4 193 aa8.7□□□□□ -1.02
TMEM55B-207ENST00000557041 A0A1B0GU69 56 aa8.69□□□□□ -1.02
TMEM55B-207ENST00000557041 DYNC2H1Q8NCM8 4307 aaKnown RBP8.68□□□□□ -1.02
TMEM55B-207ENST00000557041 FAT1Q14517 4588 aa8.65□□□□□ -1.02
TMEM55B-207ENST00000557041 SPINK7P58062 85 aa8.64□□□□□ -1.03
TMEM55B-207ENST00000557041 DNAH5Q8TE73 4624 aa8.63□□□□□ -1.03
TMEM55B-207ENST00000557041 SEC61GP60059 68 aa8.61□□□□□ -1.03
TMEM55B-207ENST00000557041 VPS13BQ7Z7G8 4022 aa8.58□□□□□ -1.04
TMEM55B-207ENST00000557041 PKHD1P08F94 4074 aa8.58□□□□□ -1.04
TMEM55B-207ENST00000557041 LINC01558Q9Y6Z2 57 aa8.57□□□□□ -1.04
TMEM55B-207ENST00000557041 LCA10Q71F78 164 aa8.56□□□□□ -1.04
TMEM55B-207ENST00000557041 Q75L30 129 aa8.55□□□□□ -1.04
TMEM55B-207ENST00000557041 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
TMEM55B-207ENST00000557041 ATP11AUNQ6ZP68 121 aa8.49□□□□□ -1.05
TMEM55B-207ENST00000557041 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
TMEM55B-207ENST00000557041 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
TMEM55B-207ENST00000557041 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
TMEM55B-207ENST00000557041 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
TMEM55B-207ENST00000557041 Q5VSD8 79 aa8.44□□□□□ -1.06
TMEM55B-207ENST00000557041 ALMS1Q8TCU4 4167 aa8.43□□□□□ -1.06
TMEM55B-207ENST00000557041 UQCR11O14957 56 aa8.41□□□□□ -1.06
TMEM55B-207ENST00000557041 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
TMEM55B-207ENST00000557041 KRTAP21-3Q3LHN1 58 aa8.4□□□□□ -1.06
TMEM55B-207ENST00000557041 FAT2Q9NYQ8 4349 aa8.38□□□□□ -1.07
TMEM55B-207ENST00000557041 SACSQ9NZJ4 4579 aa8.38□□□□□ -1.07
TMEM55B-207ENST00000557041 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
TMEM55B-207ENST00000557041 MYCBP2O75592 4640 aa8.33□□□□□ -1.08
TMEM55B-207ENST00000557041 KMT2CQ8NEZ4 4911 aaKnown RBP8.32□□□□□ -1.08
TMEM55B-207ENST00000557041 PKD1P98161 4303 aa8.3□□□□□ -1.08
TMEM55B-207ENST00000557041 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
TMEM55B-207ENST00000557041 KTN1-AS1Q86SY8 53 aa8.28□□□□□ -1.08
TMEM55B-207ENST00000557041 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
TMEM55B-207ENST00000557041 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
TMEM55B-207ENST00000557041 APOBP04114 4563 aaKnown RBP8.22□□□□□ -1.09
TMEM55B-207ENST00000557041 A8MUU9 505 aa8.22□□□□□ -1.09
TMEM55B-207ENST00000557041 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.09
TMEM55B-207ENST00000557041 A0A0D9SG42 100 aa8.19□□□□□ -1.1
TMEM55B-207ENST00000557041 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
TMEM55B-207ENST00000557041 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
TMEM55B-207ENST00000557041 A0A1B0GU33 70 aa8.18□□□□□ -1.1
TMEM55B-207ENST00000557041 A6NN06 94 aa8.17□□□□□ -1.1
TMEM55B-207ENST00000557041 KIAA1109Q2LD37 5005 aa8.15□□□□□ -1.1
TMEM55B-207ENST00000557041 KRTAP10-4P60372 401 aaPredicted RBP8.15□□□□□ -1.1
TMEM55B-207ENST00000557041 COX6B2Q6YFQ2 88 aa8.13□□□□□ -1.11
TMEM55B-207ENST00000557041 RBM12B-AS1Q9P1G2 102 aa8.13□□□□□ -1.11
TMEM55B-207ENST00000557041 FAT3Q8TDW7 4589 aa8.12□□□□□ -1.11
TMEM55B-207ENST00000557041 K7ERS5 55 aa8.12□□□□□ -1.11
TMEM55B-207ENST00000557041 CRIPTQ9P021 101 aa8.09□□□□□ -1.11
TMEM55B-207ENST00000557041 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
TMEM55B-207ENST00000557041 RYR2Q92736 4967 aa8.07□□□□□ -1.12
TMEM55B-207ENST00000557041 RYR3Q15413 4870 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms