RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 RAB37Q96AX2 223 aa5.25□□□□□ -1.57
HNRNPC-228ENST00000557033 A0A0B4J2C4 111 aa5.24□□□□□ -1.57
HNRNPC-228ENST00000557033 SPATA45Q537H7 98 aa5.24□□□□□ -1.57
HNRNPC-228ENST00000557033 VAMP8Q9BV40 100 aa5.23□□□□□ -1.57
HNRNPC-228ENST00000557033 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
HNRNPC-228ENST00000557033 A0A1B0GX51 115 aa5.21□□□□□ -1.58
HNRNPC-228ENST00000557033 Q6Q795 121 aa5.21□□□□□ -1.58
HNRNPC-228ENST00000557033 C2orf91Q6ZV80 131 aa5.21□□□□□ -1.58
HNRNPC-228ENST00000557033 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
HNRNPC-228ENST00000557033 LST1O00453 97 aa5.2□□□□□ -1.58
HNRNPC-228ENST00000557033 ANAPC13Q9BS18 74 aa5.2□□□□□ -1.58
HNRNPC-228ENST00000557033 H3BUT2 72 aa5.19□□□□□ -1.58
HNRNPC-228ENST00000557033 TEN1Q86WV5 123 aa5.19□□□□□ -1.58
HNRNPC-228ENST00000557033 SS18L2Q9UHA2 77 aa5.19□□□□□ -1.58
HNRNPC-228ENST00000557033 MT1HP80294 61 aa5.18□□□□□ -1.58
HNRNPC-228ENST00000557033 SCGB1C2P0DMR2 95 aa5.17□□□□□ -1.58
HNRNPC-228ENST00000557033 DEFB116Q30KQ4 102 aa5.17□□□□□ -1.58
HNRNPC-228ENST00000557033 H3BMG7 143 aa5.16□□□□□ -1.58
HNRNPC-228ENST00000557033 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
HNRNPC-228ENST00000557033 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
HNRNPC-228ENST00000557033 OBSCN-AS1Q96MR7 158 aa5.16□□□□□ -1.58
HNRNPC-228ENST00000557033 H3BQ85 93 aa5.15□□□□□ -1.59
HNRNPC-228ENST00000557033 FABP2P12104 132 aa5.15□□□□□ -1.59
HNRNPC-228ENST00000557033 FXYD2P54710 66 aa5.15□□□□□ -1.59
HNRNPC-228ENST00000557033 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
HNRNPC-228ENST00000557033 MP68P56378 58 aa5.13□□□□□ -1.59
HNRNPC-228ENST00000557033 HSD52Q0P140 79 aa5.13□□□□□ -1.59
HNRNPC-228ENST00000557033 Q96NJ1 140 aa5.13□□□□□ -1.59
HNRNPC-228ENST00000557033 A0A087WSZ3 146 aa5.12□□□□□ -1.59
HNRNPC-228ENST00000557033 DNAL4O96015 105 aa5.12□□□□□ -1.59
HNRNPC-228ENST00000557033 COX6CP09669 75 aa5.12□□□□□ -1.59
HNRNPC-228ENST00000557033 PYY3Q5JQD4 70 aa5.12□□□□□ -1.59
HNRNPC-228ENST00000557033 COX6B2Q6YFQ2 88 aa5.12□□□□□ -1.59
HNRNPC-228ENST00000557033 TMEM256-PLSCR3K7ERE1 68 aa5.11□□□□□ -1.59
HNRNPC-228ENST00000557033 ORMDL1Q9P0S3 153 aa5.11□□□□□ -1.59
HNRNPC-228ENST00000557033 TRBV7-4A0A0J9YYF1 115 aa5.1□□□□□ -1.59
HNRNPC-228ENST00000557033 A0A1W2PNM2 257 aa5.1□□□□□ -1.59
HNRNPC-228ENST00000557033 Q5W150 140 aa5.1□□□□□ -1.59
HNRNPC-228ENST00000557033 ANKRD29Q8N6D5 301 aa5.1□□□□□ -1.59
HNRNPC-228ENST00000557033 C20orf166-AS1Q96NR2 134 aa5.1□□□□□ -1.59
HNRNPC-228ENST00000557033 A8MUU9 505 aa5.09□□□□□ -1.59
HNRNPC-228ENST00000557033 M0R2T5 61 aa5.09□□□□□ -1.59
HNRNPC-228ENST00000557033 UQCR10Q9UDW1 63 aa5.09□□□□□ -1.59
HNRNPC-228ENST00000557033 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
HNRNPC-228ENST00000557033 K7ERJ3 54 aa5.07□□□□□ -1.6
HNRNPC-228ENST00000557033 LCE1FQ5T754 118 aa5.06□□□□□ -1.6
HNRNPC-228ENST00000557033 TRACP01848 142 aa5.05□□□□□ -1.6
HNRNPC-228ENST00000557033 IGKV4-1P06312 121 aa5.05□□□□□ -1.6
HNRNPC-228ENST00000557033 LINC00313P59037 77 aa5.05□□□□□ -1.6
HNRNPC-228ENST00000557033 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
HNRNPC-228ENST00000557033 CCKP06307 115 aa5.04□□□□□ -1.6
HNRNPC-228ENST00000557033 SIGMAR1Q99720 223 aa5.04□□□□□ -1.6
HNRNPC-228ENST00000557033 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
HNRNPC-228ENST00000557033 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
HNRNPC-228ENST00000557033 TRBV20-1A0A075B6N2 111 aa5.03□□□□□ -1.6
HNRNPC-228ENST00000557033 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
HNRNPC-228ENST00000557033 LINC00472Q9H8W2 130 aa5.03□□□□□ -1.6
HNRNPC-228ENST00000557033 RBM3P98179 157 aaKnown RBP5.02□□□□□ -1.61
HNRNPC-228ENST00000557033 A0A1B0GV72 72 aa5.01□□□□□ -1.61
HNRNPC-228ENST00000557033 DSCR8Q96T75 97 aa5.01□□□□□ -1.61
HNRNPC-228ENST00000557033 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
HNRNPC-228ENST00000557033 BAALC-AS2P0C853 105 aa4.99□□□□□ -1.61
HNRNPC-228ENST00000557033 C9JAW5 83 aa4.98□□□□□ -1.61
HNRNPC-228ENST00000557033 VPS25Q9BRG1 176 aa4.97□□□□□ -1.61
HNRNPC-228ENST00000557033 J3KT08 172 aa4.96□□□□□ -1.62
HNRNPC-228ENST00000557033 M0R143 59 aa4.96□□□□□ -1.62
HNRNPC-228ENST00000557033 A0A1B0GW54 56 aa4.95□□□□□ -1.62
HNRNPC-228ENST00000557033 JMJD7-PLA2G4BH0Y9G9 81 aa4.95□□□□□ -1.62
HNRNPC-228ENST00000557033 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
HNRNPC-228ENST00000557033 BATFQ16520 125 aa4.94□□□□□ -1.62
HNRNPC-228ENST00000557033 Q6ZQT0 140 aa4.94□□□□□ -1.62
HNRNPC-228ENST00000557033 NDUFB1O75438 58 aa4.92□□□□□ -1.62
HNRNPC-228ENST00000557033 PDE6GP18545 87 aa4.92□□□□□ -1.62
HNRNPC-228ENST00000557033 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
HNRNPC-228ENST00000557033 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
HNRNPC-228ENST00000557033 K7ERS5 55 aa4.91□□□□□ -1.62
HNRNPC-228ENST00000557033 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
HNRNPC-228ENST00000557033 HRES1P13985 223 aa4.9□□□□□ -1.63
HNRNPC-228ENST00000557033 SMIM6P0DI80 62 aa4.89□□□□□ -1.63
HNRNPC-228ENST00000557033 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
HNRNPC-228ENST00000557033 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
HNRNPC-228ENST00000557033 LYRM7Q5U5X0 104 aa4.88□□□□□ -1.63
HNRNPC-228ENST00000557033 NAA38Q9BRA0 125 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-228ENST00000557033 A8MWP4 228 aa4.87□□□□□ -1.63
HNRNPC-228ENST00000557033 SPINK7P58062 85 aa4.86□□□□□ -1.63
HNRNPC-228ENST00000557033 Q8N9L7 120 aa4.86□□□□□ -1.63
HNRNPC-228ENST00000557033 TSTD3H0UI37 97 aa4.85□□□□□ -1.63
HNRNPC-228ENST00000557033 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
HNRNPC-228ENST00000557033 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.63
HNRNPC-228ENST00000557033 NREPQ16612 68 aa4.84□□□□□ -1.63
HNRNPC-228ENST00000557033 C14orf132Q9NPU4 83 aa4.84□□□□□ -1.63
HNRNPC-228ENST00000557033 USH2AO75445 5202 aa4.82□□□□□ -1.64
HNRNPC-228ENST00000557033 MT2AP02795 61 aa4.82□□□□□ -1.64
HNRNPC-228ENST00000557033 PRR15Q8IV56 129 aa4.82□□□□□ -1.64
HNRNPC-228ENST00000557033 H3BT86 120 aa4.8□□□□□ -1.64
HNRNPC-228ENST00000557033 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
HNRNPC-228ENST00000557033 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
HNRNPC-228ENST00000557033 A8MU10 97 aa4.78□□□□□ -1.64
HNRNPC-228ENST00000557033 TMEM254Q8TBM7 123 aa4.78□□□□□ -1.64
HNRNPC-228ENST00000557033 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms