RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 HRES1P13985 223 aa1.74□□□□□ -2.13
SLIRP-208ENST00000556956 SPINK7P58062 85 aa1.74□□□□□ -2.13
SLIRP-208ENST00000556956 CASC10Q5T4H9 136 aa1.74□□□□□ -2.13
SLIRP-208ENST00000556956 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
SLIRP-208ENST00000556956 GCN1Q92616 2671 aaKnown RBP1.74□□□□□ -2.13
SLIRP-208ENST00000556956 ABCA12Q86UK0 2595 aa1.74□□□□□ -2.13
SLIRP-208ENST00000556956 SVEP1Q4LDE5 3571 aa1.74□□□□□ -2.13
SLIRP-208ENST00000556956 SORL1Q92673 2214 aa1.74□□□□□ -2.13
SLIRP-208ENST00000556956 SPG11Q96JI7 2443 aa1.74□□□□□ -2.13
SLIRP-208ENST00000556956 CSPG4Q6UVK1 2322 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 CELSR1Q9NYQ6 3014 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 CENPEQ02224 2701 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 A0A096LNI7 61 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 A0A1B0GVX0 72 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 C8orf87E5RJ46 101 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 ZNF706Q9Y5V0 76 aaPredicted RBP1.73□□□□□ -2.13
SLIRP-208ENST00000556956 HELZ2Q9BYK8 2649 aaKnown RBP1.73□□□□□ -2.13
SLIRP-208ENST00000556956 ZANQ9Y493 2812 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 POLQO75417 2590 aa1.73□□□□□ -2.13
SLIRP-208ENST00000556956 TEX15Q9BXT5 2789 aa1.72□□□□□ -2.13
SLIRP-208ENST00000556956 IGHV6-1A0A0B4J1U7 121 aa1.72□□□□□ -2.13
SLIRP-208ENST00000556956 LINC00313P59037 77 aa1.72□□□□□ -2.13
SLIRP-208ENST00000556956 SPATA8Q6RVD6 105 aa1.72□□□□□ -2.13
SLIRP-208ENST00000556956 Q96NJ1 140 aa1.72□□□□□ -2.13
SLIRP-208ENST00000556956 UNC79Q9P2D8 2635 aa1.72□□□□□ -2.13
SLIRP-208ENST00000556956 CUBNO60494 3623 aa1.72□□□□□ -2.13
SLIRP-208ENST00000556956 A0A1B0GU69 56 aa1.71□□□□□ -2.14
SLIRP-208ENST00000556956 LINC01554Q52M75 96 aa1.71□□□□□ -2.14
SLIRP-208ENST00000556956 LINC00483Q53H64 154 aa1.71□□□□□ -2.14
SLIRP-208ENST00000556956 ITPR2Q14571 2701 aa1.71□□□□□ -2.14
SLIRP-208ENST00000556956 MYO9AB2RTY4 2548 aa1.71□□□□□ -2.14
SLIRP-208ENST00000556956 NSD1Q96L73 2696 aaPredicted RBP1.71□□□□□ -2.14
SLIRP-208ENST00000556956 MXRA5Q9NR99 2828 aa1.71□□□□□ -2.14
SLIRP-208ENST00000556956 ANK3Q12955 4377 aaKnown RBP1.7□□□□□ -2.14
SLIRP-208ENST00000556956 WNK1Q9H4A3 2382 aa1.7□□□□□ -2.14
SLIRP-208ENST00000556956 UQCR11O14957 56 aa1.7□□□□□ -2.14
SLIRP-208ENST00000556956 KRTAP12-2P59991 146 aa1.7□□□□□ -2.14
SLIRP-208ENST00000556956 MIR22HGQ0VDD5 57 aa1.7□□□□□ -2.14
SLIRP-208ENST00000556956 SMR3AQ99954 134 aa1.7□□□□□ -2.14
SLIRP-208ENST00000556956 RETNLBQ9BQ08 111 aa1.7□□□□□ -2.14
SLIRP-208ENST00000556956 FASNP49327 2511 aaKnown RBP1.7□□□□□ -2.14
SLIRP-208ENST00000556956 TLN2Q9Y4G6 2542 aa1.7□□□□□ -2.14
SLIRP-208ENST00000556956 CCDC168Q8NDH2 2452 aa1.69□□□□□ -2.14
SLIRP-208ENST00000556956 RTL8CO15255 209 aa1.69□□□□□ -2.14
SLIRP-208ENST00000556956 KRTAP13-1Q8IUC0 172 aa1.69□□□□□ -2.14
SLIRP-208ENST00000556956 KRTAP11-1Q8IUC1 163 aa1.69□□□□□ -2.14
SLIRP-208ENST00000556956 UBE2DNLQ8IWF7 75 aa1.69□□□□□ -2.14
SLIRP-208ENST00000556956 DMAC1Q96GE9 116 aa1.69□□□□□ -2.14
SLIRP-208ENST00000556956 SONP18583 2426 aaKnown RBP1.69□□□□□ -2.14
SLIRP-208ENST00000556956 MAP1AP78559 2803 aaPredicted RBP1.68□□□□□ -2.14
SLIRP-208ENST00000556956 CHTF8P0CG12 524 aa1.68□□□□□ -2.14
SLIRP-208ENST00000556956 SETXQ7Z333 2677 aaKnown RBP1.68□□□□□ -2.14
SLIRP-208ENST00000556956 ACANP16112 2415 aa1.68□□□□□ -2.14
SLIRP-208ENST00000556956 OTOGQ6ZRI0 2925 aa1.67□□□□□ -2.14
SLIRP-208ENST00000556956 HIVEP2P31629 2446 aa1.67□□□□□ -2.14
SLIRP-208ENST00000556956 HECTD1Q9ULT8 2610 aa1.67□□□□□ -2.14
SLIRP-208ENST00000556956 Q5W150 140 aa1.67□□□□□ -2.14
SLIRP-208ENST00000556956 SSBP3-AS1Q7Z2R9 100 aa1.67□□□□□ -2.14
SLIRP-208ENST00000556956 MTORP42345 2549 aa1.66□□□□□ -2.14
SLIRP-208ENST00000556956 K7EIL1 84 aa1.66□□□□□ -2.14
SLIRP-208ENST00000556956 ZNF861PO60384 105 aa1.66□□□□□ -2.14
SLIRP-208ENST00000556956 SPINK6Q6UWN8 80 aa1.66□□□□□ -2.14
SLIRP-208ENST00000556956 ADM2Q7Z4H4 148 aa1.66□□□□□ -2.14
SLIRP-208ENST00000556956 SPACA4Q8TDM5 124 aa1.66□□□□□ -2.14
SLIRP-208ENST00000556956 APLNQ9ULZ1 77 aa1.66□□□□□ -2.14
SLIRP-208ENST00000556956 FN1P02751 2386 aaKnown RBP1.66□□□□□ -2.14
SLIRP-208ENST00000556956 C2CD3Q4AC94 2353 aa1.65□□□□□ -2.14
SLIRP-208ENST00000556956 NBDYA0A0U1RRE5 68 aa1.65□□□□□ -2.15
SLIRP-208ENST00000556956 CSAG1Q6PB30 78 aa1.65□□□□□ -2.15
SLIRP-208ENST00000556956 CIRBP-AS1Q8TBR5 109 aa1.65□□□□□ -2.15
SLIRP-208ENST00000556956 F8P00451 2351 aa1.65□□□□□ -2.15
SLIRP-208ENST00000556956 NF1P21359 2839 aa1.65□□□□□ -2.15
SLIRP-208ENST00000556956 HIVEP1P15822 2718 aa1.65□□□□□ -2.15
SLIRP-208ENST00000556956 BAHCC1Q9P281 2608 aa1.65□□□□□ -2.15
SLIRP-208ENST00000556956 IGLV7-43P04211 117 aa1.64□□□□□ -2.15
SLIRP-208ENST00000556956 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
SLIRP-208ENST00000556956 PSORS1C2Q9UIG4 136 aa1.64□□□□□ -2.15
SLIRP-208ENST00000556956 TEP1Q99973 2627 aaKnown RBP1.64□□□□□ -2.15
SLIRP-208ENST00000556956 CMYA5Q8N3K9 4069 aa1.63□□□□□ -2.15
SLIRP-208ENST00000556956 PANO1I0J062 215 aa1.63□□□□□ -2.15
SLIRP-208ENST00000556956 ANAPC11Q9NYG5 84 aa1.63□□□□□ -2.15
SLIRP-208ENST00000556956 DNAH3Q8TD57 4116 aa1.63□□□□□ -2.15
SLIRP-208ENST00000556956 DNAH1Q9P2D7 4330 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 JMJD1CQ15652 2540 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 A0A087WTM6 91 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 NUPR2A6NF83 97 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 K7ERS5 55 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 LY6G6CO95867 125 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 KRTAP25-1Q3LHN0 102 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
SLIRP-208ENST00000556956 ANK2Q01484 3957 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 TENM1Q9UKZ4 2725 aa1.62□□□□□ -2.15
SLIRP-208ENST00000556956 SETD2Q9BYW2 2564 aaPredicted RBP1.61□□□□□ -2.15
SLIRP-208ENST00000556956 KRTAP1-4P0C5Y4 121 aa1.61□□□□□ -2.15
SLIRP-208ENST00000556956 C1orf134Q5TEV5 83 aa1.61□□□□□ -2.15
SLIRP-208ENST00000556956 ATRQ13535 2644 aa1.61□□□□□ -2.15
SLIRP-208ENST00000556956 ALMS1Q8TCU4 4167 aa1.61□□□□□ -2.15
SLIRP-208ENST00000556956 VWFP04275 2813 aa1.6□□□□□ -2.15
SLIRP-208ENST00000556956 A8MUU9 505 aa1.6□□□□□ -2.15
SLIRP-208ENST00000556956 MAST4O15021 2626 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms