RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 KRTAP10-8P60410 259 aa3.07□□□□□ -1.92
ATXN3-244ENST00000556898 Q8NBF4 154 aa3.07□□□□□ -1.92
ATXN3-244ENST00000556898 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
ATXN3-244ENST00000556898 OBSCN-AS1Q96MR7 158 aa3.07□□□□□ -1.92
ATXN3-244ENST00000556898 IGLV8-61A0A075B6I0 122 aa3.06□□□□□ -1.92
ATXN3-244ENST00000556898 F8WEM9 126 aa3.06□□□□□ -1.92
ATXN3-244ENST00000556898 RBM3P98179 157 aaKnown RBP3.06□□□□□ -1.92
ATXN3-244ENST00000556898 TEN1Q86WV5 123 aa3.06□□□□□ -1.92
ATXN3-244ENST00000556898 VPS25Q9BRG1 176 aa3.06□□□□□ -1.92
ATXN3-244ENST00000556898 TRBV7-4A0A0J9YYF1 115 aa3.05□□□□□ -1.92
ATXN3-244ENST00000556898 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
ATXN3-244ENST00000556898 H3BQ85 93 aa3.05□□□□□ -1.92
ATXN3-244ENST00000556898 Q6ZQT0 140 aa3.05□□□□□ -1.92
ATXN3-244ENST00000556898 SSBP3-AS1Q7Z2R9 100 aa3.05□□□□□ -1.92
ATXN3-244ENST00000556898 JMJD7-PLA2G4BH0Y9G9 81 aa3.04□□□□□ -1.92
ATXN3-244ENST00000556898 Q75L30 129 aa3.04□□□□□ -1.92
ATXN3-244ENST00000556898 DSCR8Q96T75 97 aa3.04□□□□□ -1.92
ATXN3-244ENST00000556898 LOC110117498A0A087WWA1 95 aa3.03□□□□□ -1.92
ATXN3-244ENST00000556898 CCKP06307 115 aa3.03□□□□□ -1.92
ATXN3-244ENST00000556898 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
ATXN3-244ENST00000556898 Q6JHZ5 121 aa3.03□□□□□ -1.92
ATXN3-244ENST00000556898 LINC00304Q8N9R0 145 aa3.03□□□□□ -1.92
ATXN3-244ENST00000556898 A0A087WSZ3 146 aa3.02□□□□□ -1.93
ATXN3-244ENST00000556898 TRBV7-7A0A0K0K1E9 115 aa3.02□□□□□ -1.93
ATXN3-244ENST00000556898 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
ATXN3-244ENST00000556898 DEFB116Q30KQ4 102 aa3.01□□□□□ -1.93
ATXN3-244ENST00000556898 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
ATXN3-244ENST00000556898 RETNLBQ9BQ08 111 aa3.01□□□□□ -1.93
ATXN3-244ENST00000556898 Q6Q795 121 aa3□□□□□ -1.93
ATXN3-244ENST00000556898 LINC00846Q9NV44 126 aa3□□□□□ -1.93
ATXN3-244ENST00000556898 LPAP08519 4548 aa3□□□□□ -1.93
ATXN3-244ENST00000556898 CD164Q04900 197 aa2.99□□□□□ -1.93
ATXN3-244ENST00000556898 Q96NJ1 140 aa2.99□□□□□ -1.93
ATXN3-244ENST00000556898 SPINK1P00995 79 aa2.98□□□□□ -1.93
ATXN3-244ENST00000556898 PDE6GP18545 87 aa2.98□□□□□ -1.93
ATXN3-244ENST00000556898 SPAG11AQ6PDA7 123 aa2.98□□□□□ -1.93
ATXN3-244ENST00000556898 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
ATXN3-244ENST00000556898 MUC2Q02817 5179 aa2.98□□□□□ -1.93
ATXN3-244ENST00000556898 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
ATXN3-244ENST00000556898 C1orf195Q5TG92 126 aa2.97□□□□□ -1.93
ATXN3-244ENST00000556898 Q6ZVQ6 151 aa2.97□□□□□ -1.93
ATXN3-244ENST00000556898 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
ATXN3-244ENST00000556898 NREPQ16612 68 aa2.96□□□□□ -1.94
ATXN3-244ENST00000556898 LIMD2Q9BT23 127 aa2.96□□□□□ -1.94
ATXN3-244ENST00000556898 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.94
ATXN3-244ENST00000556898 IGKV3D-7A0A0C4DH55 119 aa2.95□□□□□ -1.94
ATXN3-244ENST00000556898 IGKV4-1P06312 121 aa2.95□□□□□ -1.94
ATXN3-244ENST00000556898 RPS29P62273 56 aaKnown RBP2.95□□□□□ -1.94
ATXN3-244ENST00000556898 Q5XG85 94 aa2.95□□□□□ -1.94
ATXN3-244ENST00000556898 Q8N9L7 120 aa2.95□□□□□ -1.94
ATXN3-244ENST00000556898 DSCR10P59022 87 aa2.94□□□□□ -1.94
ATXN3-244ENST00000556898 PRR4Q16378 134 aa2.94□□□□□ -1.94
ATXN3-244ENST00000556898 ASB16-AS1Q495Z4 193 aa2.94□□□□□ -1.94
ATXN3-244ENST00000556898 SIGMAR1Q99720 223 aa2.94□□□□□ -1.94
ATXN3-244ENST00000556898 SS18L2Q9UHA2 77 aa2.94□□□□□ -1.94
ATXN3-244ENST00000556898 MUC17Q685J3 4493 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 FAM240AA0A1B0GVK7 77 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 A0A1B0GW54 56 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 J3QR89 54 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 K7ERU9 68 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 BPY2O14599 106 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 ACYP1P07311 99 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 NOTCH2NLQ7Z3S9 236 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 UBL5Q9BZL1 73 aa2.93□□□□□ -1.94
ATXN3-244ENST00000556898 IGLV7-46A0A075B6I9 117 aa2.92□□□□□ -1.94
ATXN3-244ENST00000556898 C9orf92A6NGG3 77 aa2.92□□□□□ -1.94
ATXN3-244ENST00000556898 K7EQZ3 153 aa2.92□□□□□ -1.94
ATXN3-244ENST00000556898 CRCT1Q9UGL9 99 aa2.92□□□□□ -1.94
ATXN3-244ENST00000556898 IGHV6-1A0A0B4J1U7 121 aa2.91□□□□□ -1.94
ATXN3-244ENST00000556898 MT-ATP8P03928 68 aa2.91□□□□□ -1.94
ATXN3-244ENST00000556898 A0A1B0GVX0 72 aa2.9□□□□□ -1.95
ATXN3-244ENST00000556898 A8MWP4 228 aa2.9□□□□□ -1.95
ATXN3-244ENST00000556898 LINC00643Q86TS7 51 aa2.9□□□□□ -1.95
ATXN3-244ENST00000556898 A0A087WVE0 104 aa2.89□□□□□ -1.95
ATXN3-244ENST00000556898 MMP24-AS1A0A0U1RRL7 71 aa2.89□□□□□ -1.95
ATXN3-244ENST00000556898 J3KT08 172 aa2.89□□□□□ -1.95
ATXN3-244ENST00000556898 KRTAP13-3Q3SY46 172 aa2.89□□□□□ -1.95
ATXN3-244ENST00000556898 PRR15Q8IV56 129 aa2.89□□□□□ -1.95
ATXN3-244ENST00000556898 KRTAP16-1A8MUX0 517 aa2.88□□□□□ -1.95
ATXN3-244ENST00000556898 HIST1H4AP62805 103 aaKnown RBP2.88□□□□□ -1.95
ATXN3-244ENST00000556898 FP248Q71RG6 208 aaPredicted RBP2.88□□□□□ -1.95
ATXN3-244ENST00000556898 WFDC13Q8IUB5 93 aa2.88□□□□□ -1.95
ATXN3-244ENST00000556898 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
ATXN3-244ENST00000556898 NDUFB1O75438 58 aa2.87□□□□□ -1.95
ATXN3-244ENST00000556898 LINC00313P59037 77 aa2.87□□□□□ -1.95
ATXN3-244ENST00000556898 CXCL6P80162 114 aa2.87□□□□□ -1.95
ATXN3-244ENST00000556898 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
ATXN3-244ENST00000556898 ATP5EP2Q5VTU8 51 aa2.86□□□□□ -1.95
ATXN3-244ENST00000556898 C8orf87E5RJ46 101 aa2.85□□□□□ -1.95
ATXN3-244ENST00000556898 HCG22E2RYF7 251 aa2.84□□□□□ -1.95
ATXN3-244ENST00000556898 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-244ENST00000556898 TPRXLQ17RH7 258 aa2.84□□□□□ -1.95
ATXN3-244ENST00000556898 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
ATXN3-244ENST00000556898 CASC2Q6XLA1 102 aa2.84□□□□□ -1.95
ATXN3-244ENST00000556898 hDV103S1A0JD37 113 aa2.83□□□□□ -1.96
ATXN3-244ENST00000556898 TMEM254Q8TBM7 123 aa2.83□□□□□ -1.96
ATXN3-244ENST00000556898 MRPL34Q9BQ48 92 aaKnown RBP2.83□□□□□ -1.96
ATXN3-244ENST00000556898 A8MUU9 505 aa2.82□□□□□ -1.96
ATXN3-244ENST00000556898 NDUFS5O43920 106 aa2.82□□□□□ -1.96
ATXN3-244ENST00000556898 RPL37P61927 97 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms