RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 TJP1Q07157 1748 aa-1.17□□□□□ -2.6
LINC00871-203ENST00000556869 TOGARAM1Q9Y4F4 1720 aa-1.17□□□□□ -2.6
LINC00871-203ENST00000556869 DNAH8Q96JB1 4490 aa-1.17□□□□□ -2.6
LINC00871-203ENST00000556869 NIPBLQ6KC79 2804 aaeCLIP-1.17□□□□□ -2.6
LINC00871-203ENST00000556869 TRIOO75962 3097 aa-1.17□□□□□ -2.6
LINC00871-203ENST00000556869 TEX15Q9BXT5 2789 aa-1.17□□□□□ -2.6
LINC00871-203ENST00000556869 UACAQ9BZF9 1416 aa-1.17□□□□□ -2.6
LINC00871-203ENST00000556869 ITSN2Q9NZM3 1697 aa-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 SMIM13P0DJ93 91 aa-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 HMGA1P17096 107 aaKnown RBP-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 WT1-ASQ06250 92 aa-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 TDRG1Q3Y452 100 aa-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 CLPSL2Q6UWE3 100 aa-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 UBL5Q9BZL1 73 aa-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 ARHGAP35Q9NRY4 1499 aa-1.18□□□□□ -2.6
LINC00871-203ENST00000556869 KDM5DQ9BY66 1539 aa-1.19□□□□□ -2.6
LINC00871-203ENST00000556869 RELNP78509 3460 aa-1.19□□□□□ -2.6
LINC00871-203ENST00000556869 NRAPQ86VF7 1730 aa-1.19□□□□□ -2.6
LINC00871-203ENST00000556869 RANBP2P49792 3224 aaKnown RBP-1.19□□□□□ -2.6
LINC00871-203ENST00000556869 CMYA5Q8N3K9 4069 aa-1.2□□□□□ -2.6
LINC00871-203ENST00000556869 MMP24-AS1A0A0U1RRL7 71 aa-1.2□□□□□ -2.6
LINC00871-203ENST00000556869 TNP1P09430 55 aa-1.2□□□□□ -2.6
LINC00871-203ENST00000556869 RALGAPBQ86X10 1494 aa-1.2□□□□□ -2.6
LINC00871-203ENST00000556869 KIF1AQ12756 1690 aa-1.2□□□□□ -2.6
LINC00871-203ENST00000556869 RNF17Q9BXT8 1623 aaKnown RBP-1.21□□□□□ -2.6
LINC00871-203ENST00000556869 CRIP1P50238 77 aa-1.21□□□□□ -2.6
LINC00871-203ENST00000556869 DEFB121Q5J5C9 76 aa-1.21□□□□□ -2.6
LINC00871-203ENST00000556869 KCNQ1DNQ9H478 68 aa-1.21□□□□□ -2.6
LINC00871-203ENST00000556869 IGLV5-48A0A075B6I7 105 aa-1.22□□□□□ -2.6
LINC00871-203ENST00000556869 ADIRFQ15847 76 aa-1.22□□□□□ -2.6
LINC00871-203ENST00000556869 MINOS1Q5TGZ0 78 aa-1.22□□□□□ -2.6
LINC00871-203ENST00000556869 ST20Q9HBF5 79 aa-1.22□□□□□ -2.6
LINC00871-203ENST00000556869 USP9XQ93008 2570 aaPredicted RBP-1.23□□□□□ -2.61
LINC00871-203ENST00000556869 BVES-AS1Q5T3Y7 98 aa-1.23□□□□□ -2.61
LINC00871-203ENST00000556869 H3BUT2 72 aa-1.24□□□□□ -2.61
LINC00871-203ENST00000556869 SMR3BP02814 79 aaPredicted RBP-1.24□□□□□ -2.61
LINC00871-203ENST00000556869 RPS27P42677 84 aaKnown RBP-1.24□□□□□ -2.61
LINC00871-203ENST00000556869 RPS27LQ71UM5 84 aaKnown RBP-1.24□□□□□ -2.61
LINC00871-203ENST00000556869 INO80Q9ULG1 1556 aaPredicted RBP-1.25□□□□□ -2.61
LINC00871-203ENST00000556869 LY75O60449 1722 aa-1.25□□□□□ -2.61
LINC00871-203ENST00000556869 CDC42BPAQ5VT25 1732 aa-1.25□□□□□ -2.61
LINC00871-203ENST00000556869 MT1XP80297 61 aa-1.25□□□□□ -2.61
LINC00871-203ENST00000556869 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.26□□□□□ -2.61
LINC00871-203ENST00000556869 S100A13Q99584 98 aa-1.26□□□□□ -2.61
LINC00871-203ENST00000556869 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.26□□□□□ -2.61
LINC00871-203ENST00000556869 LRRIQ1Q96JM4 1722 aa-1.26□□□□□ -2.61
LINC00871-203ENST00000556869 H3BUA1 57 aa-1.27□□□□□ -2.61
LINC00871-203ENST00000556869 ENHOQ6UWT2 76 aa-1.27□□□□□ -2.61
LINC00871-203ENST00000556869 ABCC1P33527 1531 aa-1.27□□□□□ -2.61
LINC00871-203ENST00000556869 NHSQ6T4R5 1651 aa-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 DCAF1Q9Y4B6 1507 aa-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 DNAH7Q8WXX0 4024 aa-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 ETDCA0A1B0GVM5 59 aa-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 FCER1GP30273 86 aa-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 NOP10Q9NPE3 64 aaKnown RBP-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 C6orf48Q9UBA6 75 aa-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 C5orf42Q9H799 3197 aa-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 DYNC1H1Q14204 4646 aaKnown RBP-1.28□□□□□ -2.61
LINC00871-203ENST00000556869 LMTK2Q8IWU2 1503 aa-1.29□□□□□ -2.62
LINC00871-203ENST00000556869 KRTAP8-1Q8IUC2 63 aa-1.29□□□□□ -2.62
LINC00871-203ENST00000556869 COL12A1Q99715 3063 aa-1.3□□□□□ -2.62
LINC00871-203ENST00000556869 SPTAN1Q13813 2472 aaKnown RBP-1.3□□□□□ -2.62
LINC00871-203ENST00000556869 SFTA3P0C7M3 94 aa-1.3□□□□□ -2.62
LINC00871-203ENST00000556869 NCBP2-AS2Q69YL0 99 aa-1.3□□□□□ -2.62
LINC00871-203ENST00000556869 CD163L1Q9NR16 1453 aa-1.31□□□□□ -2.62
LINC00871-203ENST00000556869 H3BVH4 76 aa-1.31□□□□□ -2.62
LINC00871-203ENST00000556869 FRYQ5TBA9 3013 aa-1.31□□□□□ -2.62
LINC00871-203ENST00000556869 MYO5CQ9NQX4 1742 aa-1.32□□□□□ -2.62
LINC00871-203ENST00000556869 CFAP74Q9C0B2 1584 aa-1.32□□□□□ -2.62
LINC00871-203ENST00000556869 ABCA13Q86UQ4 5058 aa-1.32□□□□□ -2.62
LINC00871-203ENST00000556869 MYO9AB2RTY4 2548 aa-1.32□□□□□ -2.62
LINC00871-203ENST00000556869 MT1EP04732 61 aa-1.33□□□□□ -2.62
LINC00871-203ENST00000556869 GNG2P59768 71 aa-1.33□□□□□ -2.62
LINC00871-203ENST00000556869 ERVK-7P63135 1459 aa-1.33□□□□□ -2.62
LINC00871-203ENST00000556869 ANKARQ7Z5J8 1434 aa-1.34□□□□□ -2.62
LINC00871-203ENST00000556869 MAST1Q9Y2H9 1570 aa-1.34□□□□□ -2.62
LINC00871-203ENST00000556869 SPENQ96T58 3664 aaKnown RBP-1.35□□□□□ -2.63
LINC00871-203ENST00000556869 SRCAPQ6ZRS2 3230 aa-1.36□□□□□ -2.63
LINC00871-203ENST00000556869 MED14O60244 1454 aa-1.36□□□□□ -2.63
LINC00871-203ENST00000556869 C18orf32Q8TCD1 76 aa-1.36□□□□□ -2.63
LINC00871-203ENST00000556869 BPTFQ12830 3046 aa-1.36□□□□□ -2.63
LINC00871-203ENST00000556869 ABCC6O95255 1503 aa-1.36□□□□□ -2.63
LINC00871-203ENST00000556869 SPTBN5Q9NRC6 3674 aaKnown RBP-1.36□□□□□ -2.63
LINC00871-203ENST00000556869 DNAH17Q9UFH2 4485 aa-1.36□□□□□ -2.63
LINC00871-203ENST00000556869 MROH1Q8NDA8 1641 aa-1.37□□□□□ -2.63
LINC00871-203ENST00000556869 CCDC18Q5T9S5 1454 aa-1.37□□□□□ -2.63
LINC00871-203ENST00000556869 RB1CC1Q8TDY2 1594 aa-1.37□□□□□ -2.63
LINC00871-203ENST00000556869 MT1HL1P0DM35 61 aa-1.37□□□□□ -2.63
LINC00871-203ENST00000556869 DEFB114Q30KQ6 69 aa-1.37□□□□□ -2.63
LINC00871-203ENST00000556869 MT1LQ93083 61 aa-1.37□□□□□ -2.63
LINC00871-203ENST00000556869 C3P01024 1663 aa-1.37□□□□□ -2.63
LINC00871-203ENST00000556869 M0QY20 66 aa-1.38□□□□□ -2.63
LINC00871-203ENST00000556869 DIP2AQ14689 1571 aa-1.38□□□□□ -2.63
LINC00871-203ENST00000556869 DNMBPQ6XZF7 1577 aa-1.38□□□□□ -2.63
LINC00871-203ENST00000556869 ITPR1Q14643 2758 aa-1.39□□□□□ -2.63
LINC00871-203ENST00000556869 CELSR3Q9NYQ7 3312 aa-1.39□□□□□ -2.63
LINC00871-203ENST00000556869 ASXL1Q8IXJ9 1541 aa-1.4□□□□□ -2.63
LINC00871-203ENST00000556869 COL6A5A8TX70 2615 aa-1.4□□□□□ -2.63
LINC00871-203ENST00000556869 A0A1B0GUL6 1792 aa-1.4□□□□□ -2.63
LINC00871-203ENST00000556869 M0QZ58 72 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms