RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 FXYD2P54710 66 aa3.73□□□□□ -1.81
PCNX1-213ENST00000556846 DSCR10P59022 87 aa3.73□□□□□ -1.81
PCNX1-213ENST00000556846 ANKRD29Q8N6D5 301 aa3.73□□□□□ -1.81
PCNX1-213ENST00000556846 SIGMAR1Q99720 223 aa3.73□□□□□ -1.81
PCNX1-213ENST00000556846 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
PCNX1-213ENST00000556846 ORMDL1Q9P0S3 153 aa3.72□□□□□ -1.81
PCNX1-213ENST00000556846 A0A1W2PNM2 257 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 A8MUU9 505 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 H3BQ85 93 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 TMEM256-PLSCR3K7ERE1 68 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 IGKV4-1P06312 121 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 LINC00313P59037 77 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 C20orf166-AS1Q96NR2 134 aa3.71□□□□□ -1.82
PCNX1-213ENST00000556846 TRBV7-4A0A0J9YYF1 115 aa3.7□□□□□ -1.82
PCNX1-213ENST00000556846 K7ERJ3 54 aa3.7□□□□□ -1.82
PCNX1-213ENST00000556846 HSD52Q0P140 79 aa3.7□□□□□ -1.82
PCNX1-213ENST00000556846 LOC105371267A0A1B0GV96 52 aa3.69□□□□□ -1.82
PCNX1-213ENST00000556846 TRACP01848 142 aa3.69□□□□□ -1.82
PCNX1-213ENST00000556846 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
PCNX1-213ENST00000556846 DEFB116Q30KQ4 102 aa3.69□□□□□ -1.82
PCNX1-213ENST00000556846 FAM236DA0A1B0GTK5 79 aa3.68□□□□□ -1.82
PCNX1-213ENST00000556846 CCKP06307 115 aa3.68□□□□□ -1.82
PCNX1-213ENST00000556846 FAM236CP0DP71 79 aa3.68□□□□□ -1.82
PCNX1-213ENST00000556846 VPS25Q9BRG1 176 aa3.68□□□□□ -1.82
PCNX1-213ENST00000556846 TMA7Q9Y2S6 64 aaKnown RBP3.68□□□□□ -1.82
PCNX1-213ENST00000556846 IGHV6-1A0A0B4J1U7 121 aa3.67□□□□□ -1.82
PCNX1-213ENST00000556846 PYY3Q5JQD4 70 aa3.67□□□□□ -1.82
PCNX1-213ENST00000556846 UBE2V1Q13404 147 aa3.66□□□□□ -1.82
PCNX1-213ENST00000556846 DSCR8Q96T75 97 aa3.66□□□□□ -1.82
PCNX1-213ENST00000556846 UQCR10Q9UDW1 63 aa3.66□□□□□ -1.82
PCNX1-213ENST00000556846 RBM3P98179 157 aaKnown RBP3.65□□□□□ -1.83
PCNX1-213ENST00000556846 LINC00472Q9H8W2 130 aa3.65□□□□□ -1.83
PCNX1-213ENST00000556846 RBM12B-AS1Q9P1G2 102 aa3.65□□□□□ -1.83
PCNX1-213ENST00000556846 NOTCH2NLQ7Z3S9 236 aa3.64□□□□□ -1.83
PCNX1-213ENST00000556846 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
PCNX1-213ENST00000556846 C9JAW5 83 aa3.63□□□□□ -1.83
PCNX1-213ENST00000556846 BAALC-AS2P0C853 105 aa3.63□□□□□ -1.83
PCNX1-213ENST00000556846 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
PCNX1-213ENST00000556846 C8orf87E5RJ46 101 aa3.62□□□□□ -1.83
PCNX1-213ENST00000556846 C21orf62-AS1Q17RA5 79 aa3.62□□□□□ -1.83
PCNX1-213ENST00000556846 A0A1B0GVX0 72 aa3.61□□□□□ -1.83
PCNX1-213ENST00000556846 NDUFB1O75438 58 aa3.61□□□□□ -1.83
PCNX1-213ENST00000556846 LYRM7Q5U5X0 104 aa3.61□□□□□ -1.83
PCNX1-213ENST00000556846 MTURNQ8N3F0 131 aa3.61□□□□□ -1.83
PCNX1-213ENST00000556846 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
PCNX1-213ENST00000556846 J3KT08 172 aa3.6□□□□□ -1.83
PCNX1-213ENST00000556846 HRES1P13985 223 aa3.59□□□□□ -1.83
PCNX1-213ENST00000556846 ATXN8Q156A1 80 aa3.59□□□□□ -1.83
PCNX1-213ENST00000556846 JMJD7-PLA2G4BH0Y9G9 81 aa3.58□□□□□ -1.84
PCNX1-213ENST00000556846 M0R143 59 aa3.58□□□□□ -1.84
PCNX1-213ENST00000556846 Q6ZQT0 140 aa3.58□□□□□ -1.84
PCNX1-213ENST00000556846 ZCCHC13Q8WW36 166 aaKnown RBP3.58□□□□□ -1.84
PCNX1-213ENST00000556846 SPINK7P58062 85 aa3.57□□□□□ -1.84
PCNX1-213ENST00000556846 MPLKIPQ8TAP9 179 aa3.57□□□□□ -1.84
PCNX1-213ENST00000556846 NAA38Q9BRA0 125 aaKnown RBP3.57□□□□□ -1.84
PCNX1-213ENST00000556846 PDE6GP18545 87 aa3.56□□□□□ -1.84
PCNX1-213ENST00000556846 KRTAP10-10P60014 251 aa3.56□□□□□ -1.84
PCNX1-213ENST00000556846 A0A1B0GW54 56 aa3.55□□□□□ -1.84
PCNX1-213ENST00000556846 MT2AP02795 61 aa3.55□□□□□ -1.84
PCNX1-213ENST00000556846 C8orf17Q9NRJ1 99 aa3.55□□□□□ -1.84
PCNX1-213ENST00000556846 LOC110117498A0A087WWA1 95 aa3.54□□□□□ -1.84
PCNX1-213ENST00000556846 A8MWP4 228 aa3.54□□□□□ -1.84
PCNX1-213ENST00000556846 NREPQ16612 68 aa3.54□□□□□ -1.84
PCNX1-213ENST00000556846 C14orf132Q9NPU4 83 aa3.54□□□□□ -1.84
PCNX1-213ENST00000556846 Q6ZVQ6 151 aa3.53□□□□□ -1.84
PCNX1-213ENST00000556846 IGKV3D-7A0A0C4DH55 119 aa3.52□□□□□ -1.85
PCNX1-213ENST00000556846 PCP4L1A6NKN8 68 aa3.52□□□□□ -1.85
PCNX1-213ENST00000556846 MT1FP04733 61 aa3.52□□□□□ -1.85
PCNX1-213ENST00000556846 BATFQ16520 125 aa3.52□□□□□ -1.85
PCNX1-213ENST00000556846 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
PCNX1-213ENST00000556846 NDUFS5O43920 106 aa3.51□□□□□ -1.85
PCNX1-213ENST00000556846 WFDC13Q8IUB5 93 aa3.51□□□□□ -1.85
PCNX1-213ENST00000556846 PRR15Q8IV56 129 aa3.51□□□□□ -1.85
PCNX1-213ENST00000556846 TSTD3H0UI37 97 aa3.49□□□□□ -1.85
PCNX1-213ENST00000556846 MRPL34Q9BQ48 92 aaKnown RBP3.49□□□□□ -1.85
PCNX1-213ENST00000556846 SMIM6P0DI80 62 aa3.48□□□□□ -1.85
PCNX1-213ENST00000556846 TMEM254Q8TBM7 123 aa3.48□□□□□ -1.85
PCNX1-213ENST00000556846 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
PCNX1-213ENST00000556846 MMP24-AS1A0A0U1RRL7 71 aa3.46□□□□□ -1.86
PCNX1-213ENST00000556846 K7EQZ3 153 aa3.46□□□□□ -1.86
PCNX1-213ENST00000556846 BPY2O14599 106 aa3.46□□□□□ -1.86
PCNX1-213ENST00000556846 LINC00846Q9NV44 126 aa3.46□□□□□ -1.86
PCNX1-213ENST00000556846 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
PCNX1-213ENST00000556846 H3BT86 120 aa3.45□□□□□ -1.86
PCNX1-213ENST00000556846 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
PCNX1-213ENST00000556846 H1FX-AS1Q4G0G2 97 aa3.45□□□□□ -1.86
PCNX1-213ENST00000556846 A0A1W2PPM0 123 aa3.44□□□□□ -1.86
PCNX1-213ENST00000556846 USH2AO75445 5202 aa3.43□□□□□ -1.86
PCNX1-213ENST00000556846 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
PCNX1-213ENST00000556846 TAX1BP3O14907 124 aa3.42□□□□□ -1.86
PCNX1-213ENST00000556846 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
PCNX1-213ENST00000556846 HCG22E2RYF7 251 aa3.41□□□□□ -1.86
PCNX1-213ENST00000556846 Q5W150 140 aa3.41□□□□□ -1.86
PCNX1-213ENST00000556846 C7orf65Q6ZTY9 151 aa3.41□□□□□ -1.86
PCNX1-213ENST00000556846 Q8N9L7 120 aa3.41□□□□□ -1.86
PCNX1-213ENST00000556846 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
PCNX1-213ENST00000556846 SPCS1Q9Y6A9 102 aa3.4□□□□□ -1.87
PCNX1-213ENST00000556846 CXCL6P80162 114 aa3.38□□□□□ -1.87
PCNX1-213ENST00000556846 C4orf26Q17RF5 130 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms