RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 FXYD2P54710 66 aa3.92□□□□□ -1.78
SCFD1-222ENST00000556768 HSD52Q0P140 79 aa3.92□□□□□ -1.78
SCFD1-222ENST00000556768 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
SCFD1-222ENST00000556768 TMEM256-PLSCR3K7ERE1 68 aa3.91□□□□□ -1.78
SCFD1-222ENST00000556768 ORMDL1Q9P0S3 153 aa3.91□□□□□ -1.78
SCFD1-222ENST00000556768 A0A087WSZ3 146 aa3.91□□□□□ -1.78
SCFD1-222ENST00000556768 PYY3Q5JQD4 70 aa3.91□□□□□ -1.78
SCFD1-222ENST00000556768 ANKRD29Q8N6D5 301 aa3.9□□□□□ -1.79
SCFD1-222ENST00000556768 Q96NJ1 140 aa3.9□□□□□ -1.79
SCFD1-222ENST00000556768 UQCR10Q9UDW1 63 aa3.9□□□□□ -1.79
SCFD1-222ENST00000556768 M0R2T5 61 aa3.89□□□□□ -1.79
SCFD1-222ENST00000556768 SCGB1C2P0DMR2 95 aa3.89□□□□□ -1.79
SCFD1-222ENST00000556768 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
SCFD1-222ENST00000556768 K7ERJ3 54 aa3.86□□□□□ -1.79
SCFD1-222ENST00000556768 SIGMAR1Q99720 223 aa3.86□□□□□ -1.79
SCFD1-222ENST00000556768 A0A1B0GV72 72 aa3.86□□□□□ -1.79
SCFD1-222ENST00000556768 TRACP01848 142 aa3.86□□□□□ -1.79
SCFD1-222ENST00000556768 CCKP06307 115 aa3.86□□□□□ -1.79
SCFD1-222ENST00000556768 TRBV20-1A0A075B6N2 111 aa3.85□□□□□ -1.79
SCFD1-222ENST00000556768 IGKV4-1P06312 121 aa3.85□□□□□ -1.79
SCFD1-222ENST00000556768 MT1HP80294 61 aa3.85□□□□□ -1.79
SCFD1-222ENST00000556768 DSCR8Q96T75 97 aa3.85□□□□□ -1.79
SCFD1-222ENST00000556768 A0A1W2PNM2 257 aa3.84□□□□□ -1.79
SCFD1-222ENST00000556768 LINC00313P59037 77 aa3.84□□□□□ -1.79
SCFD1-222ENST00000556768 RBM3P98179 157 aaKnown RBP3.84□□□□□ -1.79
SCFD1-222ENST00000556768 KRTAP19-2Q3LHN2 52 aa3.84□□□□□ -1.79
SCFD1-222ENST00000556768 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.8
SCFD1-222ENST00000556768 VPS25Q9BRG1 176 aa3.84□□□□□ -1.8
SCFD1-222ENST00000556768 CXCL6P80162 114 aa3.83□□□□□ -1.8
SCFD1-222ENST00000556768 A8MUU9 505 aa3.82□□□□□ -1.8
SCFD1-222ENST00000556768 DSCR10P59022 87 aa3.82□□□□□ -1.8
SCFD1-222ENST00000556768 C9JAW5 83 aa3.81□□□□□ -1.8
SCFD1-222ENST00000556768 M0R143 59 aa3.81□□□□□ -1.8
SCFD1-222ENST00000556768 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
SCFD1-222ENST00000556768 BAALC-AS2P0C853 105 aa3.81□□□□□ -1.8
SCFD1-222ENST00000556768 DEFB116Q30KQ4 102 aa3.81□□□□□ -1.8
SCFD1-222ENST00000556768 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-222ENST00000556768 IGHV6-1A0A0B4J1U7 121 aa3.8□□□□□ -1.8
SCFD1-222ENST00000556768 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
SCFD1-222ENST00000556768 ATXN8Q156A1 80 aa3.79□□□□□ -1.8
SCFD1-222ENST00000556768 LINC00472Q9H8W2 130 aa3.79□□□□□ -1.8
SCFD1-222ENST00000556768 JMJD7-PLA2G4BH0Y9G9 81 aa3.79□□□□□ -1.8
SCFD1-222ENST00000556768 J3KT08 172 aa3.79□□□□□ -1.8
SCFD1-222ENST00000556768 NDUFB1O75438 58 aa3.79□□□□□ -1.8
SCFD1-222ENST00000556768 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-222ENST00000556768 LYRM7Q5U5X0 104 aa3.78□□□□□ -1.8
SCFD1-222ENST00000556768 A0A1B0GW54 56 aa3.77□□□□□ -1.81
SCFD1-222ENST00000556768 C8orf87E5RJ46 101 aa3.77□□□□□ -1.81
SCFD1-222ENST00000556768 PDE6GP18545 87 aa3.77□□□□□ -1.81
SCFD1-222ENST00000556768 FAM236DA0A1B0GTK5 79 aa3.77□□□□□ -1.81
SCFD1-222ENST00000556768 FAM236CP0DP71 79 aa3.77□□□□□ -1.81
SCFD1-222ENST00000556768 RBM12B-AS1Q9P1G2 102 aa3.77□□□□□ -1.81
SCFD1-222ENST00000556768 A0A1B0GVX0 72 aa3.76□□□□□ -1.81
SCFD1-222ENST00000556768 TSTD3H0UI37 97 aa3.76□□□□□ -1.81
SCFD1-222ENST00000556768 SMIM6P0DI80 62 aa3.75□□□□□ -1.81
SCFD1-222ENST00000556768 Q6ZQT0 140 aa3.75□□□□□ -1.81
SCFD1-222ENST00000556768 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
SCFD1-222ENST00000556768 KRTAP16-1A8MUX0 517 aa3.74□□□□□ -1.81
SCFD1-222ENST00000556768 NAA38Q9BRA0 125 aaKnown RBP3.74□□□□□ -1.81
SCFD1-222ENST00000556768 V9GYY9 64 aa3.74□□□□□ -1.81
SCFD1-222ENST00000556768 LOC110117498A0A087WWA1 95 aa3.73□□□□□ -1.81
SCFD1-222ENST00000556768 BATFQ16520 125 aa3.72□□□□□ -1.81
SCFD1-222ENST00000556768 NREPQ16612 68 aa3.72□□□□□ -1.81
SCFD1-222ENST00000556768 A8MWP4 228 aa3.71□□□□□ -1.82
SCFD1-222ENST00000556768 C14orf132Q9NPU4 83 aa3.71□□□□□ -1.82
SCFD1-222ENST00000556768 ZCCHC13Q8WW36 166 aaKnown RBP3.7□□□□□ -1.82
SCFD1-222ENST00000556768 SPINK7P58062 85 aa3.68□□□□□ -1.82
SCFD1-222ENST00000556768 C8orf17Q9NRJ1 99 aa3.68□□□□□ -1.82
SCFD1-222ENST00000556768 IGKV3D-7A0A0C4DH55 119 aa3.67□□□□□ -1.82
SCFD1-222ENST00000556768 H3BT86 120 aa3.67□□□□□ -1.82
SCFD1-222ENST00000556768 HRES1P13985 223 aa3.67□□□□□ -1.82
SCFD1-222ENST00000556768 PRR15Q8IV56 129 aa3.67□□□□□ -1.82
SCFD1-222ENST00000556768 A0A1W2PPM0 123 aa3.65□□□□□ -1.82
SCFD1-222ENST00000556768 NDUFS5O43920 106 aa3.65□□□□□ -1.83
SCFD1-222ENST00000556768 BPY2O14599 106 aa3.64□□□□□ -1.83
SCFD1-222ENST00000556768 hDV103S1A0JD37 113 aa3.63□□□□□ -1.83
SCFD1-222ENST00000556768 TMEM254Q8TBM7 123 aa3.63□□□□□ -1.83
SCFD1-222ENST00000556768 MRPL34Q9BQ48 92 aaKnown RBP3.63□□□□□ -1.83
SCFD1-222ENST00000556768 TAX1BP3O14907 124 aa3.63□□□□□ -1.83
SCFD1-222ENST00000556768 C5orf47Q569G3 176 aa3.63□□□□□ -1.83
SCFD1-222ENST00000556768 WFDC13Q8IUB5 93 aa3.63□□□□□ -1.83
SCFD1-222ENST00000556768 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
SCFD1-222ENST00000556768 SPCS1Q9Y6A9 102 aa3.62□□□□□ -1.83
SCFD1-222ENST00000556768 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
SCFD1-222ENST00000556768 K7EQZ3 153 aa3.6□□□□□ -1.83
SCFD1-222ENST00000556768 MMP24-AS1A0A0U1RRL7 71 aa3.6□□□□□ -1.83
SCFD1-222ENST00000556768 LOC105371267A0A1B0GV96 52 aa3.6□□□□□ -1.83
SCFD1-222ENST00000556768 COL5A1-AS1Q5SY13 56 aa3.59□□□□□ -1.83
SCFD1-222ENST00000556768 UBL5Q9BZL1 73 aa3.59□□□□□ -1.83
SCFD1-222ENST00000556768 MT2AP02795 61 aa3.58□□□□□ -1.84
SCFD1-222ENST00000556768 CASC2Q6XLA1 102 aa3.58□□□□□ -1.84
SCFD1-222ENST00000556768 USH2AO75445 5202 aa3.57□□□□□ -1.84
SCFD1-222ENST00000556768 C7orf65Q6ZTY9 151 aa3.56□□□□□ -1.84
SCFD1-222ENST00000556768 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
SCFD1-222ENST00000556768 FAM240AA0A1B0GVK7 77 aa3.55□□□□□ -1.84
SCFD1-222ENST00000556768 HCG22E2RYF7 251 aa3.55□□□□□ -1.84
SCFD1-222ENST00000556768 Q8N9L7 120 aa3.55□□□□□ -1.84
SCFD1-222ENST00000556768 MT1FP04733 61 aa3.54□□□□□ -1.84
SCFD1-222ENST00000556768 GTF2H5Q6ZYL4 71 aa3.54□□□□□ -1.84
SCFD1-222ENST00000556768 K7EP34 96 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms