RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 IGKV4-1P06312 121 aa6.25□□□□□ -1.41
FOXN3-212ENST00000556541 KRTAP13-3Q3SY46 172 aa6.25□□□□□ -1.41
FOXN3-212ENST00000556541 A8MWP4 228 aa6.23□□□□□ -1.41
FOXN3-212ENST00000556541 SIGMAR1Q99720 223 aa6.23□□□□□ -1.41
FOXN3-212ENST00000556541 A0A1B0GVX0 72 aa6.21□□□□□ -1.42
FOXN3-212ENST00000556541 C8orf87E5RJ46 101 aa6.21□□□□□ -1.42
FOXN3-212ENST00000556541 BPY2O14599 106 aa6.21□□□□□ -1.42
FOXN3-212ENST00000556541 NDUFB1O75438 58 aa6.21□□□□□ -1.42
FOXN3-212ENST00000556541 CXCL6P80162 114 aa6.21□□□□□ -1.42
FOXN3-212ENST00000556541 LRP2P98164 4655 aa6.2□□□□□ -1.42
FOXN3-212ENST00000556541 K7ERU9 68 aa6.2□□□□□ -1.42
FOXN3-212ENST00000556541 DSCR10P59022 87 aa6.2□□□□□ -1.42
FOXN3-212ENST00000556541 ATP5EP2Q5VTU8 51 aa6.2□□□□□ -1.42
FOXN3-212ENST00000556541 DEFB116Q30KQ4 102 aa6.19□□□□□ -1.42
FOXN3-212ENST00000556541 PRR15Q8IV56 129 aa6.19□□□□□ -1.42
FOXN3-212ENST00000556541 IGKV3D-7A0A0C4DH55 119 aa6.17□□□□□ -1.42
FOXN3-212ENST00000556541 XP32Q5T750 250 aa6.17□□□□□ -1.42
FOXN3-212ENST00000556541 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
FOXN3-212ENST00000556541 LINC00313P59037 77 aa6.16□□□□□ -1.42
FOXN3-212ENST00000556541 CDIP1Q9H305 208 aa6.15□□□□□ -1.42
FOXN3-212ENST00000556541 IGHV6-1A0A0B4J1U7 121 aa6.14□□□□□ -1.43
FOXN3-212ENST00000556541 K7EQZ3 153 aa6.14□□□□□ -1.43
FOXN3-212ENST00000556541 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
FOXN3-212ENST00000556541 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
FOXN3-212ENST00000556541 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
FOXN3-212ENST00000556541 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
FOXN3-212ENST00000556541 Q75L30 129 aa6.12□□□□□ -1.43
FOXN3-212ENST00000556541 MMP24-AS1A0A0U1RRL7 71 aa6.11□□□□□ -1.43
FOXN3-212ENST00000556541 C9orf92A6NGG3 77 aa6.11□□□□□ -1.43
FOXN3-212ENST00000556541 A8MUU9 505 aa6.11□□□□□ -1.43
FOXN3-212ENST00000556541 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
FOXN3-212ENST00000556541 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
FOXN3-212ENST00000556541 RPL37P61927 97 aaKnown RBP6.09□□□□□ -1.43
FOXN3-212ENST00000556541 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
FOXN3-212ENST00000556541 LPAP08519 4548 aa6.08□□□□□ -1.44
FOXN3-212ENST00000556541 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
FOXN3-212ENST00000556541 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
FOXN3-212ENST00000556541 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
FOXN3-212ENST00000556541 HCG22E2RYF7 251 aa6.06□□□□□ -1.44
FOXN3-212ENST00000556541 Q8N9L7 120 aa6.06□□□□□ -1.44
FOXN3-212ENST00000556541 MRPL34Q9BQ48 92 aaKnown RBP6.06□□□□□ -1.44
FOXN3-212ENST00000556541 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
FOXN3-212ENST00000556541 CASC2Q6XLA1 102 aa6.04□□□□□ -1.44
FOXN3-212ENST00000556541 H3BS24 57 aa6.01□□□□□ -1.45
FOXN3-212ENST00000556541 MUC17Q685J3 4493 aa6□□□□□ -1.45
FOXN3-212ENST00000556541 HIST1H4AP62805 103 aaKnown RBP6□□□□□ -1.45
FOXN3-212ENST00000556541 ATP11AUNQ6ZP68 121 aa6□□□□□ -1.45
FOXN3-212ENST00000556541 WFDC13Q8IUB5 93 aa5.99□□□□□ -1.45
FOXN3-212ENST00000556541 PCOTHQ58A44 107 aa5.97□□□□□ -1.45
FOXN3-212ENST00000556541 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
FOXN3-212ENST00000556541 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
FOXN3-212ENST00000556541 MT-ATP8P03928 68 aa5.96□□□□□ -1.46
FOXN3-212ENST00000556541 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
FOXN3-212ENST00000556541 MUC2Q02817 5179 aa5.95□□□□□ -1.46
FOXN3-212ENST00000556541 A0A087WVE0 104 aa5.94□□□□□ -1.46
FOXN3-212ENST00000556541 NDUFS5O43920 106 aa5.92□□□□□ -1.46
FOXN3-212ENST00000556541 UQCRQO14949 82 aa5.89□□□□□ -1.47
FOXN3-212ENST00000556541 Q5W150 140 aa5.87□□□□□ -1.47
FOXN3-212ENST00000556541 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
FOXN3-212ENST00000556541 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
FOXN3-212ENST00000556541 OCR1Q9BZK8 76 aa5.87□□□□□ -1.47
FOXN3-212ENST00000556541 TRAV22A0A0B4J277 110 aa5.84□□□□□ -1.47
FOXN3-212ENST00000556541 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
FOXN3-212ENST00000556541 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
FOXN3-212ENST00000556541 ATOX1O00244 68 aa5.84□□□□□ -1.47
FOXN3-212ENST00000556541 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
FOXN3-212ENST00000556541 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
FOXN3-212ENST00000556541 SPINK7P58062 85 aa5.82□□□□□ -1.48
FOXN3-212ENST00000556541 C5orf47Q569G3 176 aa5.82□□□□□ -1.48
FOXN3-212ENST00000556541 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
FOXN3-212ENST00000556541 H3BPC8 53 aa5.81□□□□□ -1.48
FOXN3-212ENST00000556541 LOC101927531A0A1B0GV80 90 aa5.8□□□□□ -1.48
FOXN3-212ENST00000556541 IGKV2-30P06310 120 aa5.8□□□□□ -1.48
FOXN3-212ENST00000556541 MPLKIPQ8TAP9 179 aa5.8□□□□□ -1.48
FOXN3-212ENST00000556541 TRAV7A0A075B6U4 112 aa5.79□□□□□ -1.48
FOXN3-212ENST00000556541 A0A0U1RQV1 116 aa5.79□□□□□ -1.48
FOXN3-212ENST00000556541 HRES1P13985 223 aa5.79□□□□□ -1.48
FOXN3-212ENST00000556541 H0Y9P7 68 aa5.78□□□□□ -1.48
FOXN3-212ENST00000556541 MP68P56378 58 aa5.77□□□□□ -1.49
FOXN3-212ENST00000556541 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
FOXN3-212ENST00000556541 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
FOXN3-212ENST00000556541 CYP4F30PQ9H0H9 118 aa5.74□□□□□ -1.49
FOXN3-212ENST00000556541 RBM12B-AS1Q9P1G2 102 aa5.74□□□□□ -1.49
FOXN3-212ENST00000556541 SERP2Q8N6R1 65 aa5.73□□□□□ -1.49
FOXN3-212ENST00000556541 C1orf64Q8NEQ6 169 aa5.72□□□□□ -1.49
FOXN3-212ENST00000556541 LINC00208Q96KT6 92 aa5.7□□□□□ -1.5
FOXN3-212ENST00000556541 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
FOXN3-212ENST00000556541 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
FOXN3-212ENST00000556541 COX7CP15954 63 aa5.65□□□□□ -1.5
FOXN3-212ENST00000556541 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
FOXN3-212ENST00000556541 FAM236DA0A1B0GTK5 79 aa5.63□□□□□ -1.51
FOXN3-212ENST00000556541 FAM236CP0DP71 79 aa5.63□□□□□ -1.51
FOXN3-212ENST00000556541 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
FOXN3-212ENST00000556541 C4orf26Q17RF5 130 aa5.62□□□□□ -1.51
FOXN3-212ENST00000556541 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
FOXN3-212ENST00000556541 A8MUN3 132 aa5.61□□□□□ -1.51
FOXN3-212ENST00000556541 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
FOXN3-212ENST00000556541 ANAPC13Q9BS18 74 aa5.6□□□□□ -1.51
FOXN3-212ENST00000556541 MT1HP80294 61 aa5.59□□□□□ -1.51
FOXN3-212ENST00000556541 C20orf197Q8N268 126 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms