RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
ATXN3-236ENST00000556220 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
ATXN3-236ENST00000556220 A0A0G2JQZ4 141 aa3.54□□□□□ -1.84
ATXN3-236ENST00000556220 ETDCA0A1B0GVM5 59 aa3.54□□□□□ -1.84
ATXN3-236ENST00000556220 ZNF73O43830 326 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-236ENST00000556220 MT2AP02795 61 aa3.54□□□□□ -1.84
ATXN3-236ENST00000556220 FABP2P12104 132 aa3.54□□□□□ -1.84
ATXN3-236ENST00000556220 C9orf153Q5TBE3 101 aa3.54□□□□□ -1.84
ATXN3-236ENST00000556220 OR13C6PQ8NH95 151 aa3.54□□□□□ -1.84
ATXN3-236ENST00000556220 C9JAW5 83 aa3.53□□□□□ -1.84
ATXN3-236ENST00000556220 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
ATXN3-236ENST00000556220 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
ATXN3-236ENST00000556220 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
ATXN3-236ENST00000556220 Q1RN00 199 aa3.52□□□□□ -1.85
ATXN3-236ENST00000556220 ETDBQ3ZM63 59 aa3.52□□□□□ -1.85
ATXN3-236ENST00000556220 ANKRD29Q8N6D5 301 aa3.52□□□□□ -1.85
ATXN3-236ENST00000556220 OBSCN-AS1Q96MR7 158 aa3.52□□□□□ -1.85
ATXN3-236ENST00000556220 TRACP01848 142 aa3.51□□□□□ -1.85
ATXN3-236ENST00000556220 MT1FP04733 61 aa3.51□□□□□ -1.85
ATXN3-236ENST00000556220 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
ATXN3-236ENST00000556220 Q6ZRX8 168 aa3.51□□□□□ -1.85
ATXN3-236ENST00000556220 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
ATXN3-236ENST00000556220 COX7BP24311 80 aa3.5□□□□□ -1.85
ATXN3-236ENST00000556220 IGLV5-48A0A075B6I7 105 aa3.49□□□□□ -1.85
ATXN3-236ENST00000556220 TRBV7-6A0A0J9YX20 115 aa3.49□□□□□ -1.85
ATXN3-236ENST00000556220 TEX49A0A1B0GTD5 131 aa3.49□□□□□ -1.85
ATXN3-236ENST00000556220 ATXN8Q156A1 80 aa3.49□□□□□ -1.85
ATXN3-236ENST00000556220 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
ATXN3-236ENST00000556220 S100A7L2Q5SY68 101 aa3.49□□□□□ -1.85
ATXN3-236ENST00000556220 Q6ZQY7 126 aa3.49□□□□□ -1.85
ATXN3-236ENST00000556220 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
ATXN3-236ENST00000556220 TRBV20-1A0A075B6N2 111 aa3.48□□□□□ -1.85
ATXN3-236ENST00000556220 BAALC-AS2P0C853 105 aa3.48□□□□□ -1.85
ATXN3-236ENST00000556220 SCGB1C2P0DMR2 95 aa3.48□□□□□ -1.85
ATXN3-236ENST00000556220 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
ATXN3-236ENST00000556220 COPS9Q8WXC6 57 aa3.48□□□□□ -1.85
ATXN3-236ENST00000556220 A0A1B0GV72 72 aa3.47□□□□□ -1.85
ATXN3-236ENST00000556220 C1orf195Q5TG92 126 aa3.47□□□□□ -1.85
ATXN3-236ENST00000556220 Q5XG85 94 aa3.47□□□□□ -1.85
ATXN3-236ENST00000556220 TEN1Q86WV5 123 aa3.47□□□□□ -1.85
ATXN3-236ENST00000556220 A0A1B0GX51 115 aa3.46□□□□□ -1.86
ATXN3-236ENST00000556220 hADV29S1A0JD25 119 aa3.46□□□□□ -1.86
ATXN3-236ENST00000556220 H0YGX0 51 aa3.46□□□□□ -1.86
ATXN3-236ENST00000556220 H3BT86 120 aa3.46□□□□□ -1.86
ATXN3-236ENST00000556220 SPRR1BP22528 89 aa3.46□□□□□ -1.86
ATXN3-236ENST00000556220 GTF2H5Q6ZYL4 71 aa3.46□□□□□ -1.86
ATXN3-236ENST00000556220 A0A1W2PNM2 257 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 F8W1H4 67 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 SEC61GP60059 68 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 CD164Q04900 197 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 OCIAD2Q56VL3 154 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 ATP11AUNQ6ZP68 121 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 C14orf132Q9NPU4 83 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 KMT2DO14686 5537 aa3.45□□□□□ -1.86
ATXN3-236ENST00000556220 TRBV7-4A0A0J9YYF1 115 aa3.44□□□□□ -1.86
ATXN3-236ENST00000556220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-236ENST00000556220 Q6ZQT0 140 aa3.43□□□□□ -1.86
ATXN3-236ENST00000556220 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
ATXN3-236ENST00000556220 COX6CP09669 75 aa3.42□□□□□ -1.86
ATXN3-236ENST00000556220 NDUFV3P56181 108 aaKnown RBP3.42□□□□□ -1.86
ATXN3-236ENST00000556220 DEFB105AQ8NG35 78 aa3.42□□□□□ -1.86
ATXN3-236ENST00000556220 PPDPFLQ8WWR9 84 aa3.42□□□□□ -1.86
ATXN3-236ENST00000556220 ORMDL1Q9P0S3 153 aa3.42□□□□□ -1.86
ATXN3-236ENST00000556220 LYRM7Q5U5X0 104 aa3.41□□□□□ -1.86
ATXN3-236ENST00000556220 IGFL1Q6UW32 110 aa3.41□□□□□ -1.86
ATXN3-236ENST00000556220 OCR1Q9BZK8 76 aa3.41□□□□□ -1.86
ATXN3-236ENST00000556220 DHRS4-AS1Q9P1J3 65 aa3.4□□□□□ -1.87
ATXN3-236ENST00000556220 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
ATXN3-236ENST00000556220 LOC110117498A0A087WWA1 95 aa3.39□□□□□ -1.87
ATXN3-236ENST00000556220 Q96NJ1 140 aa3.38□□□□□ -1.87
ATXN3-236ENST00000556220 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
ATXN3-236ENST00000556220 MT-ATP8P03928 68 aa3.37□□□□□ -1.87
ATXN3-236ENST00000556220 CCKP06307 115 aa3.37□□□□□ -1.87
ATXN3-236ENST00000556220 TMEM256-PLSCR3K7ERE1 68 aa3.36□□□□□ -1.87
ATXN3-236ENST00000556220 NOTCH2NLQ7Z3S9 236 aa3.36□□□□□ -1.87
ATXN3-236ENST00000556220 FAM236DA0A1B0GTK5 79 aa3.35□□□□□ -1.87
ATXN3-236ENST00000556220 DNAL4O96015 105 aa3.35□□□□□ -1.87
ATXN3-236ENST00000556220 FAM236CP0DP71 79 aa3.35□□□□□ -1.87
ATXN3-236ENST00000556220 KRTAP16-1A8MUX0 517 aa3.34□□□□□ -1.87
ATXN3-236ENST00000556220 FAM240AA0A1B0GVK7 77 aa3.33□□□□□ -1.88
ATXN3-236ENST00000556220 RBM3P98179 157 aaKnown RBP3.33□□□□□ -1.88
ATXN3-236ENST00000556220 CBY1Q9Y3M2 126 aa3.33□□□□□ -1.88
ATXN3-236ENST00000556220 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
ATXN3-236ENST00000556220 DSCR10P59022 87 aa3.32□□□□□ -1.88
ATXN3-236ENST00000556220 Q8N9L7 120 aa3.32□□□□□ -1.88
ATXN3-236ENST00000556220 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
ATXN3-236ENST00000556220 LINC00472Q9H8W2 130 aa3.32□□□□□ -1.88
ATXN3-236ENST00000556220 JMJD7-PLA2G4BH0Y9G9 81 aa3.31□□□□□ -1.88
ATXN3-236ENST00000556220 SIGMAR1Q99720 223 aa3.31□□□□□ -1.88
ATXN3-236ENST00000556220 RBM12B-AS1Q9P1G2 102 aa3.31□□□□□ -1.88
ATXN3-236ENST00000556220 IGKV3D-7A0A0C4DH55 119 aa3.3□□□□□ -1.88
ATXN3-236ENST00000556220 TRBV7-7A0A0K0K1E9 115 aa3.3□□□□□ -1.88
ATXN3-236ENST00000556220 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
ATXN3-236ENST00000556220 A8MUU9 505 aa3.3□□□□□ -1.88
ATXN3-236ENST00000556220 BPY2O14599 106 aa3.3□□□□□ -1.88
ATXN3-236ENST00000556220 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
ATXN3-236ENST00000556220 A0A087WSZ3 146 aa3.29□□□□□ -1.88
ATXN3-236ENST00000556220 A0A087WVE0 104 aa3.29□□□□□ -1.88
ATXN3-236ENST00000556220 K7ERU9 68 aa3.29□□□□□ -1.88
ATXN3-236ENST00000556220 Q6JHZ5 121 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms