RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
CHGA-205ENST00000556098 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
CHGA-205ENST00000556098 A0A087WVE0 104 aa6.43□□□□□ -1.38
CHGA-205ENST00000556098 NDUFB1O75438 58 aa6.43□□□□□ -1.38
CHGA-205ENST00000556098 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
CHGA-205ENST00000556098 A0A0G2JQZ4 141 aa6.42□□□□□ -1.38
CHGA-205ENST00000556098 A8MWP4 228 aa6.42□□□□□ -1.38
CHGA-205ENST00000556098 DSCR10P59022 87 aa6.42□□□□□ -1.38
CHGA-205ENST00000556098 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
CHGA-205ENST00000556098 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
CHGA-205ENST00000556098 ANAPC11Q9NYG5 84 aa6.41□□□□□ -1.38
CHGA-205ENST00000556098 A0A087X002 238 aa6.4□□□□□ -1.38
CHGA-205ENST00000556098 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.38
CHGA-205ENST00000556098 SERP2Q8N6R1 65 aa6.4□□□□□ -1.38
CHGA-205ENST00000556098 UQCRQO14949 82 aa6.39□□□□□ -1.39
CHGA-205ENST00000556098 SPINK1P00995 79 aa6.39□□□□□ -1.39
CHGA-205ENST00000556098 C4orf48Q5BLP8 95 aa6.39□□□□□ -1.39
CHGA-205ENST00000556098 PRR15Q8IV56 129 aa6.39□□□□□ -1.39
CHGA-205ENST00000556098 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
CHGA-205ENST00000556098 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
CHGA-205ENST00000556098 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
CHGA-205ENST00000556098 HCG22E2RYF7 251 aa6.38□□□□□ -1.39
CHGA-205ENST00000556098 K7EQZ3 153 aa6.38□□□□□ -1.39
CHGA-205ENST00000556098 COX7CP15954 63 aa6.38□□□□□ -1.39
CHGA-205ENST00000556098 Q96NJ1 140 aa6.38□□□□□ -1.39
CHGA-205ENST00000556098 HRCT1Q6UXD1 115 aa6.36□□□□□ -1.39
CHGA-205ENST00000556098 Q8N9L7 120 aa6.35□□□□□ -1.39
CHGA-205ENST00000556098 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
CHGA-205ENST00000556098 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
CHGA-205ENST00000556098 LINC00304Q8N9R0 145 aa6.33□□□□□ -1.4
CHGA-205ENST00000556098 DEFB116Q30KQ4 102 aa6.31□□□□□ -1.4
CHGA-205ENST00000556098 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
CHGA-205ENST00000556098 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
CHGA-205ENST00000556098 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
CHGA-205ENST00000556098 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
CHGA-205ENST00000556098 hDV103S1A0JD37 113 aa6.28□□□□□ -1.4
CHGA-205ENST00000556098 TMEM254Q8TBM7 123 aa6.28□□□□□ -1.4
CHGA-205ENST00000556098 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
CHGA-205ENST00000556098 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
CHGA-205ENST00000556098 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
CHGA-205ENST00000556098 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
CHGA-205ENST00000556098 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
CHGA-205ENST00000556098 C5orf47Q569G3 176 aa6.26□□□□□ -1.41
CHGA-205ENST00000556098 C1orf195Q5TG92 126 aa6.26□□□□□ -1.41
CHGA-205ENST00000556098 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
CHGA-205ENST00000556098 H3BPC8 53 aa6.25□□□□□ -1.41
CHGA-205ENST00000556098 NDUFC1O43677 76 aa6.25□□□□□ -1.41
CHGA-205ENST00000556098 KLKP1Q107X0 134 aa6.25□□□□□ -1.41
CHGA-205ENST00000556098 WFDC13Q8IUB5 93 aa6.25□□□□□ -1.41
CHGA-205ENST00000556098 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
CHGA-205ENST00000556098 MRPL34Q9BQ48 92 aaKnown RBP6.23□□□□□ -1.41
CHGA-205ENST00000556098 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
CHGA-205ENST00000556098 MP68P56378 58 aa6.21□□□□□ -1.42
CHGA-205ENST00000556098 LINC00313P59037 77 aa6.2□□□□□ -1.42
CHGA-205ENST00000556098 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
CHGA-205ENST00000556098 TMEM258P61165 79 aa6.19□□□□□ -1.42
CHGA-205ENST00000556098 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
CHGA-205ENST00000556098 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
CHGA-205ENST00000556098 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
CHGA-205ENST00000556098 FP248Q71RG6 208 aaPredicted RBP6.15□□□□□ -1.42
CHGA-205ENST00000556098 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.42
CHGA-205ENST00000556098 H0Y9P7 68 aa6.13□□□□□ -1.43
CHGA-205ENST00000556098 NDUFS5O43920 106 aa6.13□□□□□ -1.43
CHGA-205ENST00000556098 ZCCHC13Q8WW36 166 aaKnown RBP6.12□□□□□ -1.43
CHGA-205ENST00000556098 H7BZZ5 65 aa6.11□□□□□ -1.43
CHGA-205ENST00000556098 KRTAP16-1A8MUX0 517 aa6.1□□□□□ -1.43
CHGA-205ENST00000556098 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
CHGA-205ENST00000556098 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
CHGA-205ENST00000556098 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
CHGA-205ENST00000556098 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.43
CHGA-205ENST00000556098 LOC101927531A0A1B0GV80 90 aa6.08□□□□□ -1.44
CHGA-205ENST00000556098 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
CHGA-205ENST00000556098 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
CHGA-205ENST00000556098 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
CHGA-205ENST00000556098 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
CHGA-205ENST00000556098 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
CHGA-205ENST00000556098 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
CHGA-205ENST00000556098 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
CHGA-205ENST00000556098 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
CHGA-205ENST00000556098 A8MUU9 505 aa6.02□□□□□ -1.45
CHGA-205ENST00000556098 RPS28P62857 69 aaKnown RBP6.01□□□□□ -1.45
CHGA-205ENST00000556098 Q75L30 129 aa6□□□□□ -1.45
CHGA-205ENST00000556098 Q5W150 140 aa5.98□□□□□ -1.45
CHGA-205ENST00000556098 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
CHGA-205ENST00000556098 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
CHGA-205ENST00000556098 M0R2T5 61 aa5.96□□□□□ -1.46
CHGA-205ENST00000556098 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
CHGA-205ENST00000556098 MT1HP80294 61 aa5.96□□□□□ -1.46
CHGA-205ENST00000556098 LCE2CQ5TA81 110 aa5.95□□□□□ -1.46
CHGA-205ENST00000556098 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
CHGA-205ENST00000556098 XP32Q5T750 250 aa5.94□□□□□ -1.46
CHGA-205ENST00000556098 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
CHGA-205ENST00000556098 PCOTHQ58A44 107 aa5.92□□□□□ -1.46
CHGA-205ENST00000556098 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.46
CHGA-205ENST00000556098 RPL37P61927 97 aaKnown RBP5.89□□□□□ -1.47
CHGA-205ENST00000556098 COX6B2Q6YFQ2 88 aa5.88□□□□□ -1.47
CHGA-205ENST00000556098 ATP11AUNQ6ZP68 121 aa5.88□□□□□ -1.47
CHGA-205ENST00000556098 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CHGA-205ENST00000556098 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
CHGA-205ENST00000556098 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms