RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 Q5BKY6 102 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 CLLU1Q5K131 121 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 SSBP3-AS1Q7Z2R9 100 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 WFDC13Q8IUB5 93 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 Q96NJ1 140 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 AGPAT4-IT1Q9H0P7 198 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 NAA60Q9H7X0 242 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 CMC2Q9NRP2 79 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 SCN3BQ9NY72 215 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 GNG8Q9UK08 70 aa0.14□□□□□ -2.39
NEK9-208ENST00000555961 PIGBOS1A0A0B4J2F0 54 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 TRBV6-1A0A0K0K1D8 114 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 LINC00959A0A1B0GUT2 108 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 SNRPGP15A8MWD9 76 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 F6UZH7 168 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 NDUFA1O15239 70 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 PPP3R1P63098 170 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 SELENOWP63302 87 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 LINC01545Q5VT33 79 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 RPL13AP3Q6NVV1 102 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 C5orf38Q86SI9 138 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 CCDC167Q9P0B6 97 aa0.13□□□□□ -2.39
NEK9-208ENST00000555961 H3BQ15 152 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 H3BVH4 76 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 MT1AP04731 61 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 RRAS2P62070 204 aaPredicted RBP0.12□□□□□ -2.39
NEK9-208ENST00000555961 CATR1Q13166 79 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 H1FX-AS1Q4G0G2 97 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 Q6AWC8 147 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 ZNF818PQ6ZRF7 136 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 COX7B2Q8TF08 81 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 IFI27L1Q96BM0 104 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 TSC22D3Q99576 134 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 PDCD10Q9BUL8 212 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 LSM2Q9Y333 95 aaKnown RBP0.12□□□□□ -2.39
NEK9-208ENST00000555961 V9GYV3 84 aa0.12□□□□□ -2.39
NEK9-208ENST00000555961 TRAV21A0A0B4J279 112 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 NMBP08949 121 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 IGLC6P0CF74 106 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 IGLC2P0DOY2 106 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 FGF7P21781 194 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 CKS1BP61024 79 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 NMSQ5H8A3 153 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 RPL7L1Q6DKI1 246 aaKnown RBP0.11□□□□□ -2.39
NEK9-208ENST00000555961 TRGV9Q99603 122 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 PSMG3Q9BT73 122 aaPredicted RBP0.11□□□□□ -2.39
NEK9-208ENST00000555961 TMEM191AQ9H0A3 160 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 COPZ2Q9P299 210 aa0.11□□□□□ -2.39
NEK9-208ENST00000555961 A0A0G2JND7 137 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 CEBPZOSA8MTT3 80 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 CFDP00746 253 aaPredicted RBP0.1□□□□□ -2.39
NEK9-208ENST00000555961 IL5P05113 134 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 HMGN1P05114 100 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 MGPP08493 103 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 SPRR1BP22528 89 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 SMIM11AP58511 58 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 ARPC4P59998 168 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 FAM213BQ8TBF2 198 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 COPS9Q8WXC6 57 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 FXYD6Q9H0Q3 95 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 CRIPTQ9P021 101 aa0.1□□□□□ -2.39
NEK9-208ENST00000555961 ETDCA0A1B0GVM5 59 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 F8WEM9 126 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 ARMS2P0C7Q2 107 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 SMIM6P0DI80 62 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 IAPPP10997 89 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 HIST1H1DP16402 221 aaKnown RBP0.09□□□□□ -2.4
NEK9-208ENST00000555961 SMCO1Q147U7 214 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 Q6ZUT4 128 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 C20orf197Q8N268 126 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 ANP32BQ92688 251 aaKnown RBP0.09□□□□□ -2.4
NEK9-208ENST00000555961 PFDN5Q99471 154 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 CDC42SE2Q9NRR3 84 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 TOMM7Q9P0U1 55 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 S4R3F8 94 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 ARL2-SNX15V9GYD0 113 aa0.09□□□□□ -2.4
NEK9-208ENST00000555961 D6R8Y8 96 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 M0QY20 66 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 NDUFB6O95139 128 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 ACYP2P14621 99 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 GCHFRP30047 84 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 GNG2P59768 71 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 NPC2P61916 151 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 RPS25P62851 125 aaKnown RBP0.08□□□□□ -2.4
NEK9-208ENST00000555961 C10orf113Q5VZT2 155 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 KCNRGQ8N5I3 272 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 AMELXQ99217 191 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 SMIM3Q9BZL3 60 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 NMES1Q9C002 83 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 PRO1933Q9H354 126 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 LENEPQ9Y5L5 61 aa0.08□□□□□ -2.4
NEK9-208ENST00000555961 TRBV10-3A0A0K0K1G6 114 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 F8VRH5 84 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 K7ERU9 68 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 ARPC5O15511 151 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 SPINK8P0C7L1 97 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 SPRR1AP35321 89 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 MIC13Q5XKP0 118 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 C12orf73Q69YU5 71 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 ALKAL2Q6UX46 152 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms