RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
EFCAB11-208ENST00000555872 IGLV5-52A0A0A0MRZ9 124 aa6.29□□□□□ -1.4
EFCAB11-208ENST00000555872 PRLHP81277 87 aa6.29□□□□□ -1.4
EFCAB11-208ENST00000555872 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
EFCAB11-208ENST00000555872 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
EFCAB11-208ENST00000555872 CSMD3Q7Z407 3707 aa6.28□□□□□ -1.4
EFCAB11-208ENST00000555872 TLX1NBP0CAT3 122 aa6.27□□□□□ -1.41
EFCAB11-208ENST00000555872 RYR3Q15413 4870 aa6.27□□□□□ -1.41
EFCAB11-208ENST00000555872 COL6A5A8TX70 2615 aa6.27□□□□□ -1.41
EFCAB11-208ENST00000555872 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
EFCAB11-208ENST00000555872 IGKV2-24A0A0C4DH68 120 aa6.25□□□□□ -1.41
EFCAB11-208ENST00000555872 A0A096LNI7 61 aa6.24□□□□□ -1.41
EFCAB11-208ENST00000555872 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
EFCAB11-208ENST00000555872 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
EFCAB11-208ENST00000555872 K7EIL1 84 aa6.21□□□□□ -1.41
EFCAB11-208ENST00000555872 LINC01556Q5JQF7 62 aa6.21□□□□□ -1.42
EFCAB11-208ENST00000555872 H3BNG1 76 aa6.2□□□□□ -1.42
EFCAB11-208ENST00000555872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
EFCAB11-208ENST00000555872 UQCR11O14957 56 aa6.19□□□□□ -1.42
EFCAB11-208ENST00000555872 A0A1B0GU69 56 aa6.18□□□□□ -1.42
EFCAB11-208ENST00000555872 K7ERS5 55 aa6.18□□□□□ -1.42
EFCAB11-208ENST00000555872 DEFB131BA0A096LNP1 70 aa6.17□□□□□ -1.42
EFCAB11-208ENST00000555872 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
EFCAB11-208ENST00000555872 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
EFCAB11-208ENST00000555872 CIRBP-AS1Q8TBR5 109 aa6.14□□□□□ -1.43
EFCAB11-208ENST00000555872 NUPR2A6NF83 97 aa6.13□□□□□ -1.43
EFCAB11-208ENST00000555872 A0A087WTM6 91 aa6.12□□□□□ -1.43
EFCAB11-208ENST00000555872 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
EFCAB11-208ENST00000555872 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
EFCAB11-208ENST00000555872 NBEAL1Q6ZS30 2694 aa6.12□□□□□ -1.43
EFCAB11-208ENST00000555872 Q96NJ1 140 aa6.12□□□□□ -1.43
EFCAB11-208ENST00000555872 Q5W150 140 aa6.11□□□□□ -1.43
EFCAB11-208ENST00000555872 NOTCH1P46531 2555 aa6.11□□□□□ -1.43
EFCAB11-208ENST00000555872 SPRR1BP22528 89 aa6.11□□□□□ -1.43
EFCAB11-208ENST00000555872 ACYP2P14621 99 aa6.1□□□□□ -1.43
EFCAB11-208ENST00000555872 KRTAP11-1Q8IUC1 163 aa6.1□□□□□ -1.43
EFCAB11-208ENST00000555872 DMAC1Q96GE9 116 aa6.1□□□□□ -1.43
EFCAB11-208ENST00000555872 WWC2-AS2Q96NR7 200 aa6.1□□□□□ -1.43
EFCAB11-208ENST00000555872 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
EFCAB11-208ENST00000555872 HERC2O95714 4834 aa6.1□□□□□ -1.43
EFCAB11-208ENST00000555872 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
EFCAB11-208ENST00000555872 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
EFCAB11-208ENST00000555872 MGAM2Q2M2H8 2515 aa6.09□□□□□ -1.43
EFCAB11-208ENST00000555872 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
EFCAB11-208ENST00000555872 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
EFCAB11-208ENST00000555872 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
EFCAB11-208ENST00000555872 LINC00304Q8N9R0 145 aa6.08□□□□□ -1.44
EFCAB11-208ENST00000555872 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
EFCAB11-208ENST00000555872 ALMS1Q8TCU4 4167 aa6.06□□□□□ -1.44
EFCAB11-208ENST00000555872 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
EFCAB11-208ENST00000555872 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
EFCAB11-208ENST00000555872 DNAH10Q8IVF4 4471 aa6.01□□□□□ -1.45
EFCAB11-208ENST00000555872 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
EFCAB11-208ENST00000555872 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
EFCAB11-208ENST00000555872 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
EFCAB11-208ENST00000555872 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
EFCAB11-208ENST00000555872 APLNQ9ULZ1 77 aa5.97□□□□□ -1.45
EFCAB11-208ENST00000555872 SPINK6Q6UWN8 80 aa5.96□□□□□ -1.46
EFCAB11-208ENST00000555872 LYSTQ99698 3801 aa5.93□□□□□ -1.46
EFCAB11-208ENST00000555872 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
EFCAB11-208ENST00000555872 NBDYA0A0U1RRE5 68 aa5.92□□□□□ -1.46
EFCAB11-208ENST00000555872 DNAH7Q8WXX0 4024 aa5.92□□□□□ -1.46
EFCAB11-208ENST00000555872 STAB2Q8WWQ8 2551 aa5.92□□□□□ -1.46
EFCAB11-208ENST00000555872 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
EFCAB11-208ENST00000555872 PANO1I0J062 215 aa5.91□□□□□ -1.46
EFCAB11-208ENST00000555872 MEGF8Q7Z7M0 2845 aa5.91□□□□□ -1.46
EFCAB11-208ENST00000555872 ANAPC11Q9NYG5 84 aa5.9□□□□□ -1.46
EFCAB11-208ENST00000555872 UBE2DNLQ8IWF7 75 aa5.9□□□□□ -1.47
EFCAB11-208ENST00000555872 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
EFCAB11-208ENST00000555872 KRTAP1-5Q9BYS1 174 aa5.89□□□□□ -1.47
EFCAB11-208ENST00000555872 IGKV2-30P06310 120 aa5.84□□□□□ -1.47
EFCAB11-208ENST00000555872 PSORS1C2Q9UIG4 136 aa5.84□□□□□ -1.47
EFCAB11-208ENST00000555872 SPINK1P00995 79 aa5.83□□□□□ -1.48
EFCAB11-208ENST00000555872 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
EFCAB11-208ENST00000555872 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
EFCAB11-208ENST00000555872 H0YAA0 97 aa5.82□□□□□ -1.48
EFCAB11-208ENST00000555872 C14orf177Q52M58 125 aa5.81□□□□□ -1.48
EFCAB11-208ENST00000555872 STARD9Q9P2P6 4700 aa5.81□□□□□ -1.48
EFCAB11-208ENST00000555872 IGKV2D-30A0A075B6S6 120 aa5.8□□□□□ -1.48
EFCAB11-208ENST00000555872 FRAS1Q86XX4 4008 aa5.79□□□□□ -1.48
EFCAB11-208ENST00000555872 VPS13DQ5THJ4 4388 aa5.79□□□□□ -1.48
EFCAB11-208ENST00000555872 RYR2Q92736 4967 aa5.78□□□□□ -1.48
EFCAB11-208ENST00000555872 Q6ZRN7 208 aaPredicted RBP5.78□□□□□ -1.48
EFCAB11-208ENST00000555872 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
EFCAB11-208ENST00000555872 Q6ZSA8 131 aa5.76□□□□□ -1.49
EFCAB11-208ENST00000555872 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
EFCAB11-208ENST00000555872 LY6G6CO95867 125 aa5.74□□□□□ -1.49
EFCAB11-208ENST00000555872 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
EFCAB11-208ENST00000555872 SPACA4Q8TDM5 124 aa5.72□□□□□ -1.49
EFCAB11-208ENST00000555872 TGP01266 2768 aa5.71□□□□□ -1.49
EFCAB11-208ENST00000555872 Q8N1X5 172 aa5.7□□□□□ -1.5
EFCAB11-208ENST00000555872 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
EFCAB11-208ENST00000555872 KMT2CQ8NEZ4 4911 aaKnown RBP5.68□□□□□ -1.5
EFCAB11-208ENST00000555872 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
EFCAB11-208ENST00000555872 KMT2AQ03164 3969 aa5.67□□□□□ -1.5
EFCAB11-208ENST00000555872 DNAH17Q9UFH2 4485 aa5.67□□□□□ -1.5
EFCAB11-208ENST00000555872 A0A1B0GU33 70 aa5.66□□□□□ -1.5
EFCAB11-208ENST00000555872 HYDINQ4G0P3 5121 aa5.65□□□□□ -1.51
EFCAB11-208ENST00000555872 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
EFCAB11-208ENST00000555872 EPPK1P58107 5090 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms