RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
MARK3-209ENST00000555235 DNAH7Q8WXX0 4024 aa9.58□□□□□ -0.88
MARK3-209ENST00000555235 ZNF706Q9Y5V0 76 aaPredicted RBP9.58□□□□□ -0.88
MARK3-209ENST00000555235 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
MARK3-209ENST00000555235 PLECQ15149 4684 aaKnown RBP9.56□□□□□ -0.88
MARK3-209ENST00000555235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
MARK3-209ENST00000555235 FBN3Q75N90 2809 aa9.55□□□□□ -0.88
MARK3-209ENST00000555235 WWC2-AS2Q96NR7 200 aa9.53□□□□□ -0.88
MARK3-209ENST00000555235 PRKDCP78527 4128 aaKnown RBP9.53□□□□□ -0.88
MARK3-209ENST00000555235 CSMD3Q7Z407 3707 aa9.52□□□□□ -0.89
MARK3-209ENST00000555235 A0A087X002 238 aa9.51□□□□□ -0.89
MARK3-209ENST00000555235 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
MARK3-209ENST00000555235 ACYP2P14621 99 aa9.5□□□□□ -0.89
MARK3-209ENST00000555235 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
MARK3-209ENST00000555235 KRTAP13-3Q3SY46 172 aa9.48□□□□□ -0.89
MARK3-209ENST00000555235 NUPR2A6NF83 97 aa9.47□□□□□ -0.89
MARK3-209ENST00000555235 TGP01266 2768 aa9.46□□□□□ -0.89
MARK3-209ENST00000555235 Q5W150 140 aa9.46□□□□□ -0.9
MARK3-209ENST00000555235 VPS13DQ5THJ4 4388 aa9.46□□□□□ -0.9
MARK3-209ENST00000555235 A0A087WTM6 91 aa9.44□□□□□ -0.9
MARK3-209ENST00000555235 PSORS1C2Q9UIG4 136 aa9.44□□□□□ -0.9
MARK3-209ENST00000555235 IGLV5-52A0A0A0MRZ9 124 aa9.43□□□□□ -0.9
MARK3-209ENST00000555235 HECTD4Q9Y4D8 3996 aa9.42□□□□□ -0.9
MARK3-209ENST00000555235 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
MARK3-209ENST00000555235 DNAH8Q96JB1 4490 aa9.41□□□□□ -0.9
MARK3-209ENST00000555235 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
MARK3-209ENST00000555235 ZNF861PO60384 105 aa9.4□□□□□ -0.9
MARK3-209ENST00000555235 SPINK6Q6UWN8 80 aa9.4□□□□□ -0.9
MARK3-209ENST00000555235 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
MARK3-209ENST00000555235 RTL8CO15255 209 aa9.39□□□□□ -0.91
MARK3-209ENST00000555235 LINC00313P59037 77 aa9.39□□□□□ -0.91
MARK3-209ENST00000555235 DNAH17Q9UFH2 4485 aa9.37□□□□□ -0.91
MARK3-209ENST00000555235 A0A1B0GU69 56 aa9.36□□□□□ -0.91
MARK3-209ENST00000555235 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
MARK3-209ENST00000555235 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
MARK3-209ENST00000555235 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
MARK3-209ENST00000555235 FAM229AH3BQW9 127 aa9.32□□□□□ -0.92
MARK3-209ENST00000555235 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
MARK3-209ENST00000555235 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
MARK3-209ENST00000555235 CIRBP-AS1Q8TBR5 109 aa9.3□□□□□ -0.92
MARK3-209ENST00000555235 DNAH2Q9P225 4427 aa9.3□□□□□ -0.92
MARK3-209ENST00000555235 PRAC1Q96KF2 57 aa9.28□□□□□ -0.92
MARK3-209ENST00000555235 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
MARK3-209ENST00000555235 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
MARK3-209ENST00000555235 UQCR11O14957 56 aa9.25□□□□□ -0.93
MARK3-209ENST00000555235 SSBP3-AS1Q7Z2R9 100 aa9.25□□□□□ -0.93
MARK3-209ENST00000555235 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
MARK3-209ENST00000555235 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.93
MARK3-209ENST00000555235 KMT2AQ03164 3969 aa9.21□□□□□ -0.93
MARK3-209ENST00000555235 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
MARK3-209ENST00000555235 RETNLBQ9BQ08 111 aa9.18□□□□□ -0.94
MARK3-209ENST00000555235 C1orf134Q5TEV5 83 aa9.17□□□□□ -0.94
MARK3-209ENST00000555235 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
MARK3-209ENST00000555235 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
MARK3-209ENST00000555235 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
MARK3-209ENST00000555235 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
MARK3-209ENST00000555235 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
MARK3-209ENST00000555235 DNAH6Q9C0G6 4158 aa9.05□□□□□ -0.96
MARK3-209ENST00000555235 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
MARK3-209ENST00000555235 LY6G6CO95867 125 aa9.02□□□□□ -0.97
MARK3-209ENST00000555235 C4orf48Q5BLP8 95 aa9□□□□□ -0.97
MARK3-209ENST00000555235 CSAG1Q6PB30 78 aa9□□□□□ -0.97
MARK3-209ENST00000555235 Q6ZSA8 131 aa8.97□□□□□ -0.97
MARK3-209ENST00000555235 LRP1BQ9NZR2 4599 aa8.96□□□□□ -0.98
MARK3-209ENST00000555235 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
MARK3-209ENST00000555235 KRTAP10-1P60331 282 aa8.94□□□□□ -0.98
MARK3-209ENST00000555235 KMT2CQ8NEZ4 4911 aaKnown RBP8.92□□□□□ -0.98
MARK3-209ENST00000555235 SPINK1P00995 79 aa8.92□□□□□ -0.98
MARK3-209ENST00000555235 PKD1P98161 4303 aa8.92□□□□□ -0.98
MARK3-209ENST00000555235 Q8N1X5 172 aa8.87□□□□□ -0.99
MARK3-209ENST00000555235 HYDINQ4G0P3 5121 aa8.86□□□□□ -0.99
MARK3-209ENST00000555235 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
MARK3-209ENST00000555235 SACSQ9NZJ4 4579 aa8.83□□□□□ -1
MARK3-209ENST00000555235 A8MUU9 505 aa8.83□□□□□ -1
MARK3-209ENST00000555235 VPS13BQ7Z7G8 4022 aa8.81□□□□□ -1
MARK3-209ENST00000555235 H0YAA0 97 aa8.81□□□□□ -1
MARK3-209ENST00000555235 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
MARK3-209ENST00000555235 H3BS24 57 aa8.79□□□□□ -1
MARK3-209ENST00000555235 RYR2Q92736 4967 aa8.77□□□□□ -1.01
MARK3-209ENST00000555235 RYR3Q15413 4870 aa8.75□□□□□ -1.01
MARK3-209ENST00000555235 KRTAP25-1Q3LHN0 102 aa8.75□□□□□ -1.01
MARK3-209ENST00000555235 A0A1B0GU33 70 aa8.74□□□□□ -1.01
MARK3-209ENST00000555235 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
MARK3-209ENST00000555235 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
MARK3-209ENST00000555235 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
MARK3-209ENST00000555235 K7ERS5 55 aa8.62□□□□□ -1.03
MARK3-209ENST00000555235 C20orf166-AS1Q96NR2 134 aa8.62□□□□□ -1.03
MARK3-209ENST00000555235 ROMO1P60602 79 aa8.61□□□□□ -1.03
MARK3-209ENST00000555235 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
MARK3-209ENST00000555235 C9orf92A6NGG3 77 aa8.54□□□□□ -1.04
MARK3-209ENST00000555235 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
MARK3-209ENST00000555235 PKHD1L1Q86WI1 4243 aa8.52□□□□□ -1.05
MARK3-209ENST00000555235 COX6B2Q6YFQ2 88 aa8.51□□□□□ -1.05
MARK3-209ENST00000555235 DYNC1H1Q14204 4646 aaKnown RBP8.51□□□□□ -1.05
MARK3-209ENST00000555235 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
MARK3-209ENST00000555235 A0A1B0GVY2 172 aa8.49□□□□□ -1.05
MARK3-209ENST00000555235 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
MARK3-209ENST00000555235 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
MARK3-209ENST00000555235 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
MARK3-209ENST00000555235 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms