RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
SYNE2-217ENST00000555022 MRPL34Q9BQ48 92 aaKnown RBP5.33□□□□□ -1.56
SYNE2-217ENST00000555022 DNAH9Q9NYC9 4486 aa5.31□□□□□ -1.56
SYNE2-217ENST00000555022 DMBT1Q9UGM3 2413 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-217ENST00000555022 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
SYNE2-217ENST00000555022 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
SYNE2-217ENST00000555022 RTL8CO15255 209 aa5.29□□□□□ -1.56
SYNE2-217ENST00000555022 A0A1B0GU69 56 aa5.28□□□□□ -1.56
SYNE2-217ENST00000555022 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
SYNE2-217ENST00000555022 DNAH7Q8WXX0 4024 aa5.27□□□□□ -1.57
SYNE2-217ENST00000555022 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
SYNE2-217ENST00000555022 ZNF706Q9Y5V0 76 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-217ENST00000555022 Q6ZR54 194 aa5.25□□□□□ -1.57
SYNE2-217ENST00000555022 SPRR1BP22528 89 aa5.25□□□□□ -1.57
SYNE2-217ENST00000555022 FRAS1Q86XX4 4008 aa5.25□□□□□ -1.57
SYNE2-217ENST00000555022 HUWE1Q7Z6Z7 4374 aaKnown RBP5.24□□□□□ -1.57
SYNE2-217ENST00000555022 MEGF8Q7Z7M0 2845 aa5.24□□□□□ -1.57
SYNE2-217ENST00000555022 CSAG1Q6PB30 78 aa5.23□□□□□ -1.57
SYNE2-217ENST00000555022 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
SYNE2-217ENST00000555022 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
SYNE2-217ENST00000555022 WWC2-AS2Q96NR7 200 aa5.23□□□□□ -1.57
SYNE2-217ENST00000555022 PLAC8Q9NZF1 115 aa5.23□□□□□ -1.57
SYNE2-217ENST00000555022 ACYP2P14621 99 aa5.22□□□□□ -1.57
SYNE2-217ENST00000555022 CMYA5Q8N3K9 4069 aa5.22□□□□□ -1.57
SYNE2-217ENST00000555022 DNAH1Q9P2D7 4330 aa5.21□□□□□ -1.57
SYNE2-217ENST00000555022 Q8N1X5 172 aa5.21□□□□□ -1.58
SYNE2-217ENST00000555022 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
SYNE2-217ENST00000555022 C14orf177Q52M58 125 aa5.2□□□□□ -1.58
SYNE2-217ENST00000555022 KRTAP13-1Q8IUC0 172 aa5.2□□□□□ -1.58
SYNE2-217ENST00000555022 NBDYA0A0U1RRE5 68 aa5.19□□□□□ -1.58
SYNE2-217ENST00000555022 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
SYNE2-217ENST00000555022 APLNQ9ULZ1 77 aa5.18□□□□□ -1.58
SYNE2-217ENST00000555022 ASB16-AS1Q495Z4 193 aa5.17□□□□□ -1.58
SYNE2-217ENST00000555022 PLECQ15149 4684 aaKnown RBP5.16□□□□□ -1.58
SYNE2-217ENST00000555022 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
SYNE2-217ENST00000555022 ZNF861PO60384 105 aa5.14□□□□□ -1.59
SYNE2-217ENST00000555022 DNAH8Q96JB1 4490 aa5.13□□□□□ -1.59
SYNE2-217ENST00000555022 UQCR11O14957 56 aa5.13□□□□□ -1.59
SYNE2-217ENST00000555022 A0A087WTM6 91 aa5.13□□□□□ -1.59
SYNE2-217ENST00000555022 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
SYNE2-217ENST00000555022 KRTAP13-3Q3SY46 172 aa5.1□□□□□ -1.59
SYNE2-217ENST00000555022 Q6ZRN7 208 aaPredicted RBP5.1□□□□□ -1.59
SYNE2-217ENST00000555022 LINC00483Q53H64 154 aa5.09□□□□□ -1.59
SYNE2-217ENST00000555022 PLA2G1BP04054 148 aaKnown RBP5.08□□□□□ -1.6
SYNE2-217ENST00000555022 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
SYNE2-217ENST00000555022 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
SYNE2-217ENST00000555022 FAM229AH3BQW9 127 aa5.07□□□□□ -1.6
SYNE2-217ENST00000555022 DNAH17Q9UFH2 4485 aa5.07□□□□□ -1.6
SYNE2-217ENST00000555022 C1orf134Q5TEV5 83 aa5.06□□□□□ -1.6
SYNE2-217ENST00000555022 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
SYNE2-217ENST00000555022 LY6G6CO95867 125 aa5.05□□□□□ -1.6
SYNE2-217ENST00000555022 STARD9Q9P2P6 4700 aa5.04□□□□□ -1.6
SYNE2-217ENST00000555022 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
SYNE2-217ENST00000555022 DNAH3Q8TD57 4116 aa5.03□□□□□ -1.6
SYNE2-217ENST00000555022 TYMSOSQ8TAI1 123 aa5.02□□□□□ -1.61
SYNE2-217ENST00000555022 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
SYNE2-217ENST00000555022 KRTAP10-2P60368 255 aa5.01□□□□□ -1.61
SYNE2-217ENST00000555022 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
SYNE2-217ENST00000555022 DNAH11Q96DT5 4516 aa5□□□□□ -1.61
SYNE2-217ENST00000555022 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
SYNE2-217ENST00000555022 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
SYNE2-217ENST00000555022 SSBP3-AS1Q7Z2R9 100 aa4.98□□□□□ -1.61
SYNE2-217ENST00000555022 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
SYNE2-217ENST00000555022 NUPR2A6NF83 97 aa4.97□□□□□ -1.61
SYNE2-217ENST00000555022 H0YAA0 97 aa4.96□□□□□ -1.61
SYNE2-217ENST00000555022 DNAH2Q9P225 4427 aa4.96□□□□□ -1.62
SYNE2-217ENST00000555022 Q6ZSA8 131 aa4.95□□□□□ -1.62
SYNE2-217ENST00000555022 A0A0D9SG42 100 aa4.95□□□□□ -1.62
SYNE2-217ENST00000555022 KRTAP16-1A8MUX0 517 aa4.94□□□□□ -1.62
SYNE2-217ENST00000555022 LINC00304Q8N9R0 145 aa4.93□□□□□ -1.62
SYNE2-217ENST00000555022 LRP1BQ9NZR2 4599 aa4.93□□□□□ -1.62
SYNE2-217ENST00000555022 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
SYNE2-217ENST00000555022 VPS13DQ5THJ4 4388 aa4.91□□□□□ -1.62
SYNE2-217ENST00000555022 PRKDCP78527 4128 aaKnown RBP4.91□□□□□ -1.62
SYNE2-217ENST00000555022 DNHD1Q96M86 4753 aa4.91□□□□□ -1.62
SYNE2-217ENST00000555022 KRTAP10-1P60331 282 aa4.91□□□□□ -1.62
SYNE2-217ENST00000555022 A0A1B0GU33 70 aa4.9□□□□□ -1.62
SYNE2-217ENST00000555022 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
SYNE2-217ENST00000555022 A8MUU9 505 aa4.88□□□□□ -1.63
SYNE2-217ENST00000555022 ROMO1P60602 79 aa4.86□□□□□ -1.63
SYNE2-217ENST00000555022 J3QL48 77 aa4.85□□□□□ -1.63
SYNE2-217ENST00000555022 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
SYNE2-217ENST00000555022 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
SYNE2-217ENST00000555022 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
SYNE2-217ENST00000555022 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
SYNE2-217ENST00000555022 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
SYNE2-217ENST00000555022 DNAH5Q8TE73 4624 aa4.81□□□□□ -1.64
SYNE2-217ENST00000555022 P0C880 135 aa4.8□□□□□ -1.64
SYNE2-217ENST00000555022 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
SYNE2-217ENST00000555022 K7ERS5 55 aa4.79□□□□□ -1.64
SYNE2-217ENST00000555022 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
SYNE2-217ENST00000555022 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
SYNE2-217ENST00000555022 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
SYNE2-217ENST00000555022 DYNC2H1Q8NCM8 4307 aaKnown RBP4.76□□□□□ -1.65
SYNE2-217ENST00000555022 FAT1Q14517 4588 aa4.74□□□□□ -1.65
SYNE2-217ENST00000555022 HYDINQ4G0P3 5121 aa4.74□□□□□ -1.65
SYNE2-217ENST00000555022 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.65
SYNE2-217ENST00000555022 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
SYNE2-217ENST00000555022 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
SYNE2-217ENST00000555022 PKHD1P08F94 4074 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms