RNA–Protein interactions for RNA: ENST00000555014.1

HIF1A-207, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-207ENST00000555014 LINC01556Q5JQF7 62 aa2.05□□□□□ -2.08
HIF1A-207ENST00000555014 SPINK6Q6UWN8 80 aa2.05□□□□□ -2.08
HIF1A-207ENST00000555014 USP24Q9UPU5 2620 aa2.05□□□□□ -2.08
HIF1A-207ENST00000555014 PRRC2CQ9Y520 2896 aaKnown RBP2.04□□□□□ -2.08
HIF1A-207ENST00000555014 SPTBN5Q9NRC6 3674 aaKnown RBP2.04□□□□□ -2.08
HIF1A-207ENST00000555014 TRIOO75962 3097 aa2.04□□□□□ -2.08
HIF1A-207ENST00000555014 Q5VSD8 79 aa2.04□□□□□ -2.08
HIF1A-207ENST00000555014 DEFB124Q8NES8 71 aa2.04□□□□□ -2.08
HIF1A-207ENST00000555014 KALRNO60229 2985 aa2.04□□□□□ -2.08
HIF1A-207ENST00000555014 CRYBG3Q68DQ2 2970 aa2.03□□□□□ -2.08
HIF1A-207ENST00000555014 COL6A5A8TX70 2615 aa2.03□□□□□ -2.09
HIF1A-207ENST00000555014 HTTP42858 3142 aa2.02□□□□□ -2.09
HIF1A-207ENST00000555014 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
HIF1A-207ENST00000555014 LRBAP50851 2863 aa2.01□□□□□ -2.09
HIF1A-207ENST00000555014 WDFY4Q6ZS81 3184 aa2.01□□□□□ -2.09
HIF1A-207ENST00000555014 SRRM2Q9UQ35 2752 aaKnown RBP2.01□□□□□ -2.09
HIF1A-207ENST00000555014 F8P00451 2351 aa2.01□□□□□ -2.09
HIF1A-207ENST00000555014 NBASA2RRP1 2371 aa2□□□□□ -2.09
HIF1A-207ENST00000555014 CEP290O15078 2479 aa1.99□□□□□ -2.09
HIF1A-207ENST00000555014 CHD9Q3L8U1 2897 aa1.99□□□□□ -2.09
HIF1A-207ENST00000555014 SPART-AS1P0CW21 52 aa1.99□□□□□ -2.09
HIF1A-207ENST00000555014 C5orf42Q9H799 3197 aa1.99□□□□□ -2.09
HIF1A-207ENST00000555014 CREBBPQ92793 2442 aa1.99□□□□□ -2.09
HIF1A-207ENST00000555014 UNC80Q8N2C7 3258 aa1.99□□□□□ -2.09
HIF1A-207ENST00000555014 NAV2Q8IVL1 2488 aa1.97□□□□□ -2.09
HIF1A-207ENST00000555014 AKAP9Q99996 3911 aa1.97□□□□□ -2.09
HIF1A-207ENST00000555014 LAMA2P24043 3122 aaKnown RBP1.97□□□□□ -2.09
HIF1A-207ENST00000555014 DMDP11532 3685 aa1.97□□□□□ -2.09
HIF1A-207ENST00000555014 M0QZ58 72 aa1.97□□□□□ -2.09
HIF1A-207ENST00000555014 MEGF8Q7Z7M0 2845 aa1.97□□□□□ -2.09
HIF1A-207ENST00000555014 FRYQ5TBA9 3013 aa1.96□□□□□ -2.1
HIF1A-207ENST00000555014 CELSR1Q9NYQ6 3014 aa1.96□□□□□ -2.1
HIF1A-207ENST00000555014 RIF1Q5UIP0 2472 aaKnown RBP1.96□□□□□ -2.1
HIF1A-207ENST00000555014 HIVEP3Q5T1R4 2406 aa1.96□□□□□ -2.1
HIF1A-207ENST00000555014 MAST4O15021 2626 aa1.96□□□□□ -2.1
HIF1A-207ENST00000555014 SETXQ7Z333 2677 aaKnown RBP1.95□□□□□ -2.1
HIF1A-207ENST00000555014 NBPF19A0A087WUL8 3843 aa1.95□□□□□ -2.1
HIF1A-207ENST00000555014 TTC28Q96AY4 2481 aa1.95□□□□□ -2.1
HIF1A-207ENST00000555014 DMXL1Q9Y485 3027 aa1.95□□□□□ -2.1
HIF1A-207ENST00000555014 USP9XQ93008 2570 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-207ENST00000555014 SPEGQ15772 3267 aa1.95□□□□□ -2.1
HIF1A-207ENST00000555014 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
HIF1A-207ENST00000555014 ANKHD1Q8IWZ3 2542 aaKnown RBP1.95□□□□□ -2.1
HIF1A-207ENST00000555014 DCHS1Q96JQ0 3298 aa1.94□□□□□ -2.1
HIF1A-207ENST00000555014 PTPN13Q12923 2485 aa1.94□□□□□ -2.1
HIF1A-207ENST00000555014 COL12A1Q99715 3063 aa1.94□□□□□ -2.1
HIF1A-207ENST00000555014 HTN3P15516 51 aa1.94□□□□□ -2.1
HIF1A-207ENST00000555014 DNAH12Q6ZR08 3092 aa1.93□□□□□ -2.1
HIF1A-207ENST00000555014 APCP25054 2843 aa1.93□□□□□ -2.1
HIF1A-207ENST00000555014 VPS13DQ5THJ4 4388 aa1.93□□□□□ -2.1
HIF1A-207ENST00000555014 XIRP2A4UGR9 3374 aa1.92□□□□□ -2.1
HIF1A-207ENST00000555014 NF1P21359 2839 aa1.92□□□□□ -2.1
HIF1A-207ENST00000555014 SETD2Q9BYW2 2564 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-207ENST00000555014 USP34Q70CQ2 3546 aa1.91□□□□□ -2.1
HIF1A-207ENST00000555014 ZFHX4Q86UP3 3567 aa1.91□□□□□ -2.1
HIF1A-207ENST00000555014 EP400Q96L91 3159 aa1.9□□□□□ -2.1
HIF1A-207ENST00000555014 SONP18583 2426 aaKnown RBP1.9□□□□□ -2.1
HIF1A-207ENST00000555014 LAMA1P25391 3075 aa1.9□□□□□ -2.1
HIF1A-207ENST00000555014 DMBT1Q9UGM3 2413 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-207ENST00000555014 TLN1Q9Y490 2541 aaKnown RBP1.89□□□□□ -2.11
HIF1A-207ENST00000555014 TEX15Q9BXT5 2789 aa1.88□□□□□ -2.11
HIF1A-207ENST00000555014 ABCA12Q86UK0 2595 aa1.88□□□□□ -2.11
HIF1A-207ENST00000555014 DEFB4AO15263 64 aa1.88□□□□□ -2.11
HIF1A-207ENST00000555014 DEFB135Q30KP9 77 aa1.88□□□□□ -2.11
HIF1A-207ENST00000555014 ANKRD11Q6UB99 2663 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-207ENST00000555014 TACC2O95359 2948 aa1.87□□□□□ -2.11
HIF1A-207ENST00000555014 CELSR3Q9NYQ7 3312 aa1.87□□□□□ -2.11
HIF1A-207ENST00000555014 ATMQ13315 3056 aa1.87□□□□□ -2.11
HIF1A-207ENST00000555014 FLNBO75369 2602 aaKnown RBP1.87□□□□□ -2.11
HIF1A-207ENST00000555014 FREM2Q5SZK8 3169 aa1.86□□□□□ -2.11
HIF1A-207ENST00000555014 DMXL2Q8TDJ6 3036 aa1.86□□□□□ -2.11
HIF1A-207ENST00000555014 RELNP78509 3460 aa1.86□□□□□ -2.11
HIF1A-207ENST00000555014 SPTAN1Q13813 2472 aaKnown RBP1.85□□□□□ -2.11
HIF1A-207ENST00000555014 UTP20O75691 2785 aaKnown RBP1.85□□□□□ -2.11
HIF1A-207ENST00000555014 DNAH11Q96DT5 4516 aa1.85□□□□□ -2.11
HIF1A-207ENST00000555014 ITPR3Q14573 2671 aa1.84□□□□□ -2.11
HIF1A-207ENST00000555014 BDP1A6H8Y1 2624 aa1.84□□□□□ -2.11
HIF1A-207ENST00000555014 TEP1Q99973 2627 aaKnown RBP1.84□□□□□ -2.12
HIF1A-207ENST00000555014 DNAH14Q0VDD8 3507 aa1.83□□□□□ -2.12
HIF1A-207ENST00000555014 LRRK2Q5S007 2527 aa1.83□□□□□ -2.12
HIF1A-207ENST00000555014 TLN2Q9Y4G6 2542 aa1.83□□□□□ -2.12
HIF1A-207ENST00000555014 DOPEY1Q5JWR5 2465 aa1.83□□□□□ -2.12
HIF1A-207ENST00000555014 USP9YO00507 2555 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-207ENST00000555014 CSMD1Q96PZ7 3565 aa1.83□□□□□ -2.12
HIF1A-207ENST00000555014 CENPEQ02224 2701 aa1.82□□□□□ -2.12
HIF1A-207ENST00000555014 LOC400499M0QZD8 3231 aa1.82□□□□□ -2.12
HIF1A-207ENST00000555014 LAMA5O15230 3695 aa1.82□□□□□ -2.12
HIF1A-207ENST00000555014 DCHS2Q6V1P9 2916 aa1.82□□□□□ -2.12
HIF1A-207ENST00000555014 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
HIF1A-207ENST00000555014 RPS29P62273 56 aaKnown RBP1.81□□□□□ -2.12
HIF1A-207ENST00000555014 PIEZO1Q92508 2521 aa1.81□□□□□ -2.12
HIF1A-207ENST00000555014 HECTD1Q9ULT8 2610 aa1.8□□□□□ -2.12
HIF1A-207ENST00000555014 SPENQ96T58 3664 aaKnown RBP1.8□□□□□ -2.12
HIF1A-207ENST00000555014 COL7A1Q02388 2944 aa1.8□□□□□ -2.12
HIF1A-207ENST00000555014 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
HIF1A-207ENST00000555014 FASNP49327 2511 aaKnown RBP1.79□□□□□ -2.12
HIF1A-207ENST00000555014 EPG5Q9HCE0 2579 aa1.79□□□□□ -2.12
HIF1A-207ENST00000555014 WDFY3Q8IZQ1 3526 aa1.79□□□□□ -2.12
HIF1A-207ENST00000555014 TGP01266 2768 aa1.78□□□□□ -2.12
HIF1A-207ENST00000555014 CFAP46Q8IYW2 2715 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms