RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 DEPDC5O75140 1603 aa-2.02□□□□□ -2.73
PCNX1-208ENST00000554707 NESP48681 1621 aa-2.02□□□□□ -2.73
PCNX1-208ENST00000554707 CLPSL2Q6UWE3 100 aa-2.03□□□□□ -2.73
PCNX1-208ENST00000554707 NCOA2Q15596 1464 aa-2.03□□□□□ -2.73
PCNX1-208ENST00000554707 TIAM2Q8IVF5 1701 aa-2.03□□□□□ -2.73
PCNX1-208ENST00000554707 POLR1AO95602 1720 aaPredicted RBP-2.04□□□□□ -2.74
PCNX1-208ENST00000554707 LCE6AA0A183 80 aa-2.05□□□□□ -2.74
PCNX1-208ENST00000554707 SNHG12Q9BXW3 62 aa-2.05□□□□□ -2.74
PCNX1-208ENST00000554707 DOT1LQ8TEK3 1739 aa-2.05□□□□□ -2.74
PCNX1-208ENST00000554707 UMAD1C9J7I0 102 aa-2.06□□□□□ -2.74
PCNX1-208ENST00000554707 ABCC10Q5T3U5 1492 aa-2.07□□□□□ -2.74
PCNX1-208ENST00000554707 MYO3AQ8NEV4 1616 aa-2.07□□□□□ -2.74
PCNX1-208ENST00000554707 NDUFA4O00483 81 aa-2.08□□□□□ -2.74
PCNX1-208ENST00000554707 DEFB4AO15263 64 aa-2.08□□□□□ -2.74
PCNX1-208ENST00000554707 SNRPFP62306 86 aaKnown RBP-2.08□□□□□ -2.74
PCNX1-208ENST00000554707 LINC00643Q86TS7 51 aa-2.08□□□□□ -2.74
PCNX1-208ENST00000554707 RABAC1Q9UI14 185 aa-2.08□□□□□ -2.74
PCNX1-208ENST00000554707 LTN1O94822 1766 aa-2.08□□□□□ -2.74
PCNX1-208ENST00000554707 CCNB3Q8WWL7 1395 aa-2.09□□□□□ -2.74
PCNX1-208ENST00000554707 SPEGQ15772 3267 aa-2.09□□□□□ -2.74
PCNX1-208ENST00000554707 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.09□□□□□ -2.74
PCNX1-208ENST00000554707 CEP162Q5TB80 1403 aa-2.09□□□□□ -2.74
PCNX1-208ENST00000554707 MGAQ8IWI9 3026 aa-2.1□□□□□ -2.75
PCNX1-208ENST00000554707 PYY3Q5JQD4 70 aa-2.11□□□□□ -2.75
PCNX1-208ENST00000554707 S100A16Q96FQ6 103 aaKnown RBP-2.11□□□□□ -2.75
PCNX1-208ENST00000554707 PKIAP61925 76 aa-2.12□□□□□ -2.75
PCNX1-208ENST00000554707 UBR1Q8IWV7 1749 aa-2.12□□□□□ -2.75
PCNX1-208ENST00000554707 WDFY3Q8IZQ1 3526 aa-2.12□□□□□ -2.75
PCNX1-208ENST00000554707 URB2Q14146 1524 aaKnown RBP-2.12□□□□□ -2.75
PCNX1-208ENST00000554707 ZNF831Q5JPB2 1677 aa-2.13□□□□□ -2.75
PCNX1-208ENST00000554707 RPS29P62273 56 aaKnown RBP-2.14□□□□□ -2.75
PCNX1-208ENST00000554707 CDC42BPAQ5VT25 1732 aa-2.14□□□□□ -2.75
PCNX1-208ENST00000554707 Q9H521 79 aa-2.15□□□□□ -2.75
PCNX1-208ENST00000554707 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.15□□□□□ -2.75
PCNX1-208ENST00000554707 CEP350Q5VT06 3117 aa-2.15□□□□□ -2.75
PCNX1-208ENST00000554707 DIP2BQ9P265 1576 aa-2.16□□□□□ -2.76
PCNX1-208ENST00000554707 NREPQ16612 68 aa-2.17□□□□□ -2.76
PCNX1-208ENST00000554707 S100A8P05109 93 aa-2.18□□□□□ -2.76
PCNX1-208ENST00000554707 MMP24-AS1A0A0U1RRL7 71 aa-2.19□□□□□ -2.76
PCNX1-208ENST00000554707 CRYBG3Q68DQ2 2970 aa-2.19□□□□□ -2.76
PCNX1-208ENST00000554707 TMEM131LA2VDJ0 1609 aa-2.2□□□□□ -2.76
PCNX1-208ENST00000554707 DEFB131BA0A096LNP1 70 aa-2.2□□□□□ -2.76
PCNX1-208ENST00000554707 TNP1P09430 55 aa-2.2□□□□□ -2.76
PCNX1-208ENST00000554707 WT1-ASQ06250 92 aa-2.2□□□□□ -2.76
PCNX1-208ENST00000554707 ANKRD26Q9UPS8 1709 aa-2.2□□□□□ -2.76
PCNX1-208ENST00000554707 CFAP54Q96N23 3096 aa-2.21□□□□□ -2.76
PCNX1-208ENST00000554707 VPS13CQ709C8 3753 aa-2.21□□□□□ -2.76
PCNX1-208ENST00000554707 DCHS1Q96JQ0 3298 aa-2.22□□□□□ -2.76
PCNX1-208ENST00000554707 ANKRD36CQ5JPF3 1778 aa-2.22□□□□□ -2.76
PCNX1-208ENST00000554707 ARFGEF2Q9Y6D5 1785 aa-2.22□□□□□ -2.76
PCNX1-208ENST00000554707 A0A087WXM4 84 aa-2.22□□□□□ -2.76
PCNX1-208ENST00000554707 MRPL33O75394 65 aaKnown RBP-2.22□□□□□ -2.76
PCNX1-208ENST00000554707 DDX60LQ5H9U9 1706 aaKnown RBP-2.22□□□□□ -2.77
PCNX1-208ENST00000554707 VPS8Q8N3P4 1428 aa-2.23□□□□□ -2.77
PCNX1-208ENST00000554707 CCDC88BA6NC98 1476 aa-2.24□□□□□ -2.77
PCNX1-208ENST00000554707 IGLV5-48A0A075B6I7 105 aa-2.24□□□□□ -2.77
PCNX1-208ENST00000554707 EP400Q96L91 3159 aa-2.25□□□□□ -2.77
PCNX1-208ENST00000554707 KANTRA0A1W2PQU2 76 aa-2.25□□□□□ -2.77
PCNX1-208ENST00000554707 PVALEFA0A1B0GWK0 134 aa-2.26□□□□□ -2.77
PCNX1-208ENST00000554707 CRIP1P50238 77 aa-2.26□□□□□ -2.77
PCNX1-208ENST00000554707 WDFY4Q6ZS81 3184 aa-2.26□□□□□ -2.77
PCNX1-208ENST00000554707 PIK3C2BO00750 1634 aa-2.27□□□□□ -2.77
PCNX1-208ENST00000554707 AKAP12Q02952 1782 aa-2.27□□□□□ -2.77
PCNX1-208ENST00000554707 ATP5EP2Q5VTU8 51 aa-2.27□□□□□ -2.77
PCNX1-208ENST00000554707 V9GYS6 101 aa-2.27□□□□□ -2.77
PCNX1-208ENST00000554707 MUC3AQ02505 3323 aa-2.28□□□□□ -2.77
PCNX1-208ENST00000554707 PLCH1Q4KWH8 1693 aa-2.28□□□□□ -2.77
PCNX1-208ENST00000554707 TOGARAM1Q9Y4F4 1720 aa-2.28□□□□□ -2.78
PCNX1-208ENST00000554707 SMIM13P0DJ93 91 aa-2.29□□□□□ -2.78
PCNX1-208ENST00000554707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.29□□□□□ -2.78
PCNX1-208ENST00000554707 KIAA0586Q9BVV6 1533 aa-2.3□□□□□ -2.78
PCNX1-208ENST00000554707 MINOS1Q5TGZ0 78 aa-2.3□□□□□ -2.78
PCNX1-208ENST00000554707 UBL5Q9BZL1 73 aa-2.3□□□□□ -2.78
PCNX1-208ENST00000554707 LINC01546A6NGU7 62 aa-2.31□□□□□ -2.78
PCNX1-208ENST00000554707 RPS27P42677 84 aaKnown RBP-2.31□□□□□ -2.78
PCNX1-208ENST00000554707 RPS27LQ71UM5 84 aaKnown RBP-2.31□□□□□ -2.78
PCNX1-208ENST00000554707 PARP4Q9UKK3 1724 aaKnown RBP-2.31□□□□□ -2.78
PCNX1-208ENST00000554707 KIF14Q15058 1648 aa-2.31□□□□□ -2.78
PCNX1-208ENST00000554707 DNAH14Q0VDD8 3507 aa-2.32□□□□□ -2.78
PCNX1-208ENST00000554707 TDRG1Q3Y452 100 aa-2.32□□□□□ -2.78
PCNX1-208ENST00000554707 BVES-AS1Q5T3Y7 98 aa-2.32□□□□□ -2.78
PCNX1-208ENST00000554707 FRYLO94915 3013 aa-2.32□□□□□ -2.78
PCNX1-208ENST00000554707 ITSN1Q15811 1721 aa-2.33□□□□□ -2.78
PCNX1-208ENST00000554707 HMGA1P17096 107 aaKnown RBP-2.33□□□□□ -2.78
PCNX1-208ENST00000554707 KCNQ1DNQ9H478 68 aa-2.33□□□□□ -2.78
PCNX1-208ENST00000554707 HFM1A2PYH4 1435 aa-2.34□□□□□ -2.78
PCNX1-208ENST00000554707 ARHGAP35Q9NRY4 1499 aa-2.34□□□□□ -2.78
PCNX1-208ENST00000554707 PCNTO95613 3336 aa-2.35□□□□□ -2.79
PCNX1-208ENST00000554707 THOC2Q8NI27 1593 aaKnown RBP-2.35□□□□□ -2.79
PCNX1-208ENST00000554707 DEFB136Q30KP8 78 aa-2.35□□□□□ -2.79
PCNX1-208ENST00000554707 RICTORQ6R327 1708 aa-2.35□□□□□ -2.79
PCNX1-208ENST00000554707 PEG3Q9GZU2 1588 aa-2.36□□□□□ -2.79
PCNX1-208ENST00000554707 ABCC3O15438 1527 aa-2.36□□□□□ -2.79
PCNX1-208ENST00000554707 ITSN2Q9NZM3 1697 aa-2.37□□□□□ -2.79
PCNX1-208ENST00000554707 NOP10Q9NPE3 64 aaKnown RBP-2.37□□□□□ -2.79
PCNX1-208ENST00000554707 SZT2Q5T011 3432 aa-2.38□□□□□ -2.79
PCNX1-208ENST00000554707 H3BUA1 57 aa-2.38□□□□□ -2.79
PCNX1-208ENST00000554707 SFTA3P0C7M3 94 aa-2.38□□□□□ -2.79
PCNX1-208ENST00000554707 MAP3K4Q9Y6R4 1608 aa-2.39□□□□□ -2.79
PCNX1-208ENST00000554707 MKI67P46013 3256 aaKnown RBP-2.39□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms