RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 IGKV2D-28P01615 120 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 IGHV3-23P01764 117 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 MGPP08493 103 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 LINC00315P59091 139 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 HSPG2P98160 4391 aa2.78□□□□□ -1.96
ATXN3-227ENST00000554491 G3V318 75 aa2.77□□□□□ -1.97
ATXN3-227ENST00000554491 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-227ENST00000554491 LY6G6CO95867 125 aa2.77□□□□□ -1.97
ATXN3-227ENST00000554491 RNASE3P12724 160 aaKnown RBP2.77□□□□□ -1.97
ATXN3-227ENST00000554491 PRB3Q04118 309 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-227ENST00000554491 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
ATXN3-227ENST00000554491 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-227ENST00000554491 COA5Q86WW8 74 aa2.77□□□□□ -1.97
ATXN3-227ENST00000554491 RHPN1-AS1Q9BWJ2 59 aa2.77□□□□□ -1.97
ATXN3-227ENST00000554491 C8orf17Q9NRJ1 99 aa2.77□□□□□ -1.97
ATXN3-227ENST00000554491 SORL1Q92673 2214 aa2.77□□□□□ -1.97
ATXN3-227ENST00000554491 DNAH6Q9C0G6 4158 aa2.76□□□□□ -1.97
ATXN3-227ENST00000554491 IGLV10-54A0A075B6I4 117 aa2.76□□□□□ -1.97
ATXN3-227ENST00000554491 TRGV4A0A0C4DH28 118 aa2.76□□□□□ -1.97
ATXN3-227ENST00000554491 TRBV6-4A0A1B0GX49 114 aa2.76□□□□□ -1.97
ATXN3-227ENST00000554491 A8MWP4 228 aa2.76□□□□□ -1.97
ATXN3-227ENST00000554491 H3BUX3 64 aa2.76□□□□□ -1.97
ATXN3-227ENST00000554491 C1orf137Q5JT78 98 aa2.76□□□□□ -1.97
ATXN3-227ENST00000554491 FAT2Q9NYQ8 4349 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 IGLV7-46A0A075B6I9 117 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 IGHV3-66A0A0C4DH42 116 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 A8MTW9 85 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 P0C880 135 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 COX7BP24311 80 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 PRR4Q16378 134 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 LY6EQ16553 131 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 PRR9Q5T870 116 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 CHCHD7Q9BUK0 85 aa2.75□□□□□ -1.97
ATXN3-227ENST00000554491 M0QY20 66 aa2.74□□□□□ -1.97
ATXN3-227ENST00000554491 LINC00483Q53H64 154 aa2.74□□□□□ -1.97
ATXN3-227ENST00000554491 LINC00575Q6W349 94 aa2.74□□□□□ -1.97
ATXN3-227ENST00000554491 C20orf166-AS1Q96NR2 134 aa2.74□□□□□ -1.97
ATXN3-227ENST00000554491 PRR34Q9NV39 138 aa2.74□□□□□ -1.97
ATXN3-227ENST00000554491 CDKN2A-AS1Q9UH64 79 aa2.74□□□□□ -1.97
ATXN3-227ENST00000554491 VPS13DQ5THJ4 4388 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 IGLV1-50A0A075B6I6 118 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 LINC00959A0A1B0GUT2 108 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 M0R2N4 97 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 UQCR11O14957 56 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 CCL18P55774 89 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 LINC00158P58513 81 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 LINC00612Q8N6U2 182 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 SPRR4Q96PI1 79 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 DNAH2Q9P225 4427 aa2.73□□□□□ -1.97
ATXN3-227ENST00000554491 DNAH10OSP0CZ25 163 aa2.72□□□□□ -1.97
ATXN3-227ENST00000554491 C9orf163Q8N9P6 203 aa2.72□□□□□ -1.97
ATXN3-227ENST00000554491 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
ATXN3-227ENST00000554491 ZNF861PO60384 105 aa2.71□□□□□ -1.98
ATXN3-227ENST00000554491 DNAH17Q9UFH2 4485 aa2.71□□□□□ -1.98
ATXN3-227ENST00000554491 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
ATXN3-227ENST00000554491 KRTAP26-1Q6PEX3 210 aa2.7□□□□□ -1.98
ATXN3-227ENST00000554491 C10orf99Q6UWK7 81 aa2.7□□□□□ -1.98
ATXN3-227ENST00000554491 C7orf33Q8WU49 177 aa2.7□□□□□ -1.98
ATXN3-227ENST00000554491 PKD1P98161 4303 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 NUPR2A6NF83 97 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 RPL37AP8A6NKH3 93 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 SPINK13Q1W4C9 94 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 Q8N9L7 120 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 C4orf3Q8WVX3 66 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
ATXN3-227ENST00000554491 APOBP04114 4563 aaKnown RBP2.69□□□□□ -1.98
ATXN3-227ENST00000554491 IGKV3-7A0A075B6H7 116 aa2.68□□□□□ -1.98
ATXN3-227ENST00000554491 IGLV8-61A0A075B6I0 122 aa2.68□□□□□ -1.98
ATXN3-227ENST00000554491 INSP01308 110 aa2.68□□□□□ -1.98
ATXN3-227ENST00000554491 Q6ZQY7 126 aa2.68□□□□□ -1.98
ATXN3-227ENST00000554491 DEFB131BA0A096LNP1 70 aa2.67□□□□□ -1.98
ATXN3-227ENST00000554491 DEFB131AP59861 70 aa2.67□□□□□ -1.98
ATXN3-227ENST00000554491 DEFB1P60022 68 aa2.67□□□□□ -1.98
ATXN3-227ENST00000554491 COX6A2Q02221 97 aa2.67□□□□□ -1.98
ATXN3-227ENST00000554491 DEFB136Q30KP8 78 aa2.67□□□□□ -1.98
ATXN3-227ENST00000554491 LRP1BQ9NZR2 4599 aa2.67□□□□□ -1.98
ATXN3-227ENST00000554491 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
ATXN3-227ENST00000554491 CIRBP-AS1Q8TBR5 109 aa2.66□□□□□ -1.98
ATXN3-227ENST00000554491 RNF213Q63HN8 5207 aa2.65□□□□□ -1.98
ATXN3-227ENST00000554491 FLG2Q5D862 2391 aaPredicted RBP2.65□□□□□ -1.98
ATXN3-227ENST00000554491 IGKV2D-24A0A075B6R9 120 aa2.65□□□□□ -1.99
ATXN3-227ENST00000554491 A0A1B0GVX0 72 aa2.65□□□□□ -1.99
ATXN3-227ENST00000554491 A8MUU9 505 aa2.65□□□□□ -1.99
ATXN3-227ENST00000554491 Q5W150 140 aa2.65□□□□□ -1.99
ATXN3-227ENST00000554491 Q8IZM0 81 aa2.65□□□□□ -1.99
ATXN3-227ENST00000554491 DHRS4-AS1Q9P1J3 65 aa2.65□□□□□ -1.99
ATXN3-227ENST00000554491 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
ATXN3-227ENST00000554491 COX17Q14061 63 aa2.64□□□□□ -1.99
ATXN3-227ENST00000554491 C16orf74Q96GX8 76 aa2.64□□□□□ -1.99
ATXN3-227ENST00000554491 IGKV3OR2-268A0A0C4DH90 116 aa2.63□□□□□ -1.99
ATXN3-227ENST00000554491 DEFB104AQ8WTQ1 72 aa2.63□□□□□ -1.99
ATXN3-227ENST00000554491 KLK12Q9UKR0 248 aa2.63□□□□□ -1.99
ATXN3-227ENST00000554491 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
ATXN3-227ENST00000554491 TRGV1A0A0A0MS02 117 aa2.62□□□□□ -1.99
ATXN3-227ENST00000554491 A0A1B0GU69 56 aa2.62□□□□□ -1.99
ATXN3-227ENST00000554491 HRES1P13985 223 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms