RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 TEN1Q86WV5 123 aa3.88□□□□□ -1.79
KTN1-213ENST00000554306 OBSCN-AS1Q96MR7 158 aa3.88□□□□□ -1.79
KTN1-213ENST00000554306 VPS25Q9BRG1 176 aa3.88□□□□□ -1.79
KTN1-213ENST00000554306 C14orf132Q9NPU4 83 aa3.88□□□□□ -1.79
KTN1-213ENST00000554306 LOC110117498A0A087WWA1 95 aa3.87□□□□□ -1.79
KTN1-213ENST00000554306 A0A0G2JQZ4 141 aa3.87□□□□□ -1.79
KTN1-213ENST00000554306 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
KTN1-213ENST00000554306 SPINK1P00995 79 aa3.87□□□□□ -1.79
KTN1-213ENST00000554306 CCKP06307 115 aa3.87□□□□□ -1.79
KTN1-213ENST00000554306 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
KTN1-213ENST00000554306 NOTCH2NLQ7Z3S9 236 aa3.87□□□□□ -1.79
KTN1-213ENST00000554306 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
KTN1-213ENST00000554306 Q6ZQT0 140 aa3.86□□□□□ -1.79
KTN1-213ENST00000554306 LIMD2Q9BT23 127 aa3.86□□□□□ -1.79
KTN1-213ENST00000554306 PKHD1L1Q86WI1 4243 aa3.85□□□□□ -1.79
KTN1-213ENST00000554306 TRBV7-7A0A0K0K1E9 115 aa3.85□□□□□ -1.79
KTN1-213ENST00000554306 A0A1W2PNM2 257 aa3.85□□□□□ -1.79
KTN1-213ENST00000554306 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
KTN1-213ENST00000554306 Q6Q795 121 aa3.85□□□□□ -1.79
KTN1-213ENST00000554306 A0A1B0GW54 56 aa3.84□□□□□ -1.79
KTN1-213ENST00000554306 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.79
KTN1-213ENST00000554306 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
KTN1-213ENST00000554306 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
KTN1-213ENST00000554306 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
KTN1-213ENST00000554306 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
KTN1-213ENST00000554306 A0A087WSZ3 146 aa3.83□□□□□ -1.8
KTN1-213ENST00000554306 HERC2O95714 4834 aa3.83□□□□□ -1.8
KTN1-213ENST00000554306 J3QR89 54 aa3.82□□□□□ -1.8
KTN1-213ENST00000554306 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
KTN1-213ENST00000554306 Q5XG85 94 aa3.81□□□□□ -1.8
KTN1-213ENST00000554306 ACYP1P07311 99 aa3.8□□□□□ -1.8
KTN1-213ENST00000554306 NREPQ16612 68 aa3.8□□□□□ -1.8
KTN1-213ENST00000554306 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
KTN1-213ENST00000554306 UBL5Q9BZL1 73 aa3.79□□□□□ -1.8
KTN1-213ENST00000554306 FAT3Q8TDW7 4589 aa3.78□□□□□ -1.8
KTN1-213ENST00000554306 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.8
KTN1-213ENST00000554306 FAM240AA0A1B0GVK7 77 aa3.77□□□□□ -1.81
KTN1-213ENST00000554306 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
KTN1-213ENST00000554306 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
KTN1-213ENST00000554306 J3KT08 172 aa3.77□□□□□ -1.81
KTN1-213ENST00000554306 PRR4Q16378 134 aa3.77□□□□□ -1.81
KTN1-213ENST00000554306 C1orf195Q5TG92 126 aa3.77□□□□□ -1.81
KTN1-213ENST00000554306 RETNLBQ9BQ08 111 aa3.77□□□□□ -1.81
KTN1-213ENST00000554306 K7ERU9 68 aa3.76□□□□□ -1.81
KTN1-213ENST00000554306 IGKV4-1P06312 121 aa3.76□□□□□ -1.81
KTN1-213ENST00000554306 Q6ZVQ6 151 aa3.76□□□□□ -1.81
KTN1-213ENST00000554306 FP248Q71RG6 208 aaPredicted RBP3.76□□□□□ -1.81
KTN1-213ENST00000554306 LINC00472Q9H8W2 130 aa3.76□□□□□ -1.81
KTN1-213ENST00000554306 LINC00846Q9NV44 126 aa3.76□□□□□ -1.81
KTN1-213ENST00000554306 BPY2O14599 106 aa3.75□□□□□ -1.81
KTN1-213ENST00000554306 NDUFB1O75438 58 aa3.75□□□□□ -1.81
KTN1-213ENST00000554306 DEFB116Q30KQ4 102 aa3.75□□□□□ -1.81
KTN1-213ENST00000554306 SIGMAR1Q99720 223 aa3.75□□□□□ -1.81
KTN1-213ENST00000554306 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
KTN1-213ENST00000554306 KRTAP5-9P26371 169 aa3.74□□□□□ -1.81
KTN1-213ENST00000554306 Q96NJ1 140 aa3.74□□□□□ -1.81
KTN1-213ENST00000554306 DMBT1Q9UGM3 2413 aaPredicted RBP3.74□□□□□ -1.81
KTN1-213ENST00000554306 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
KTN1-213ENST00000554306 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
KTN1-213ENST00000554306 A8MWP4 228 aa3.71□□□□□ -1.82
KTN1-213ENST00000554306 DSCR10P59022 87 aa3.71□□□□□ -1.82
KTN1-213ENST00000554306 CXCL6P80162 114 aa3.71□□□□□ -1.82
KTN1-213ENST00000554306 ATP5EP2Q5VTU8 51 aa3.71□□□□□ -1.82
KTN1-213ENST00000554306 LINC00643Q86TS7 51 aa3.71□□□□□ -1.82
KTN1-213ENST00000554306 TNXBP22105 4242 aa3.71□□□□□ -1.82
KTN1-213ENST00000554306 IGHV6-1A0A0B4J1U7 121 aa3.7□□□□□ -1.82
KTN1-213ENST00000554306 IGKV3D-7A0A0C4DH55 119 aa3.7□□□□□ -1.82
KTN1-213ENST00000554306 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
KTN1-213ENST00000554306 A0A1B0GVX0 72 aa3.69□□□□□ -1.82
KTN1-213ENST00000554306 C9orf92A6NGG3 77 aa3.69□□□□□ -1.82
KTN1-213ENST00000554306 LINC00313P59037 77 aa3.69□□□□□ -1.82
KTN1-213ENST00000554306 PRR15Q8IV56 129 aa3.69□□□□□ -1.82
KTN1-213ENST00000554306 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
KTN1-213ENST00000554306 K7EQZ3 153 aa3.67□□□□□ -1.82
KTN1-213ENST00000554306 HIST1H4AP62805 103 aaKnown RBP3.67□□□□□ -1.82
KTN1-213ENST00000554306 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
KTN1-213ENST00000554306 Q8N9L7 120 aa3.66□□□□□ -1.82
KTN1-213ENST00000554306 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
KTN1-213ENST00000554306 hDV103S1A0JD37 113 aa3.64□□□□□ -1.83
KTN1-213ENST00000554306 CASC2Q6XLA1 102 aa3.64□□□□□ -1.83
KTN1-213ENST00000554306 MMP24-AS1A0A0U1RRL7 71 aa3.63□□□□□ -1.83
KTN1-213ENST00000554306 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
KTN1-213ENST00000554306 WFDC13Q8IUB5 93 aa3.63□□□□□ -1.83
KTN1-213ENST00000554306 TMEM254Q8TBM7 123 aa3.63□□□□□ -1.83
KTN1-213ENST00000554306 NDUFS5O43920 106 aa3.62□□□□□ -1.83
KTN1-213ENST00000554306 MRPL34Q9BQ48 92 aaKnown RBP3.62□□□□□ -1.83
KTN1-213ENST00000554306 IMUPQ9GZP8 106 aa3.62□□□□□ -1.83
KTN1-213ENST00000554306 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
KTN1-213ENST00000554306 MT-ATP8P03928 68 aa3.61□□□□□ -1.83
KTN1-213ENST00000554306 RPL37P61927 97 aaKnown RBP3.6□□□□□ -1.83
KTN1-213ENST00000554306 ATP11AUNQ6ZP68 121 aa3.6□□□□□ -1.83
KTN1-213ENST00000554306 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
KTN1-213ENST00000554306 A0A087WVE0 104 aa3.59□□□□□ -1.83
KTN1-213ENST00000554306 A8MUU9 505 aa3.59□□□□□ -1.83
KTN1-213ENST00000554306 SCGB1A1P11684 91 aa3.58□□□□□ -1.84
KTN1-213ENST00000554306 TP53AIP1Q9HCN2 124 aa3.57□□□□□ -1.84
KTN1-213ENST00000554306 PCOTHQ58A44 107 aa3.55□□□□□ -1.84
KTN1-213ENST00000554306 ZCCHC13Q8WW36 166 aaKnown RBP3.55□□□□□ -1.84
KTN1-213ENST00000554306 FAM236AA0A1B0GUQ0 79 aa3.54□□□□□ -1.84
KTN1-213ENST00000554306 FAM236BA0A1B0GV22 79 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms