RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TRBV7-7A0A0K0K1E9 115 aa9.19□□□□□ -0.94
NEK9-204ENST00000554258 A0A1W2PNM2 257 aa9.19□□□□□ -0.94
NEK9-204ENST00000554258 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
NEK9-204ENST00000554258 A0A1B0GV72 72 aa9.16□□□□□ -0.94
NEK9-204ENST00000554258 DSCR8Q96T75 97 aa9.16□□□□□ -0.94
NEK9-204ENST00000554258 LOC110117498A0A087WWA1 95 aa9.15□□□□□ -0.94
NEK9-204ENST00000554258 F8W1H4 67 aa9.15□□□□□ -0.94
NEK9-204ENST00000554258 PDE6GP18545 87 aa9.14□□□□□ -0.95
NEK9-204ENST00000554258 Q6ZQT0 140 aa9.13□□□□□ -0.95
NEK9-204ENST00000554258 A0A1B0GV90 55 aa9.12□□□□□ -0.95
NEK9-204ENST00000554258 CCKP06307 115 aa9.12□□□□□ -0.95
NEK9-204ENST00000554258 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
NEK9-204ENST00000554258 NEBP20929 6669 aa9.1□□□□□ -0.95
NEK9-204ENST00000554258 A0A1B0GW54 56 aa9.09□□□□□ -0.95
NEK9-204ENST00000554258 C21orf62-AS1Q17RA5 79 aa9.09□□□□□ -0.95
NEK9-204ENST00000554258 C1orf195Q5TG92 126 aa9.09□□□□□ -0.95
NEK9-204ENST00000554258 A0A087WSZ3 146 aa9.08□□□□□ -0.96
NEK9-204ENST00000554258 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
NEK9-204ENST00000554258 KRTAP6-3Q3LI67 103 aa9.04□□□□□ -0.96
NEK9-204ENST00000554258 ETDBQ3ZM63 59 aa9.03□□□□□ -0.96
NEK9-204ENST00000554258 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
NEK9-204ENST00000554258 Q96NJ1 140 aa9.02□□□□□ -0.97
NEK9-204ENST00000554258 LINC00472Q9H8W2 130 aa9□□□□□ -0.97
NEK9-204ENST00000554258 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
NEK9-204ENST00000554258 LINC00846Q9NV44 126 aa8.96□□□□□ -0.98
NEK9-204ENST00000554258 LCE2BO14633 110 aa8.94□□□□□ -0.98
NEK9-204ENST00000554258 C9orf92A6NGG3 77 aa8.91□□□□□ -0.98
NEK9-204ENST00000554258 NREPQ16612 68 aa8.89□□□□□ -0.99
NEK9-204ENST00000554258 KRTAP20-1Q3LI63 56 aa8.89□□□□□ -0.99
NEK9-204ENST00000554258 IGKV4-1P06312 121 aa8.88□□□□□ -0.99
NEK9-204ENST00000554258 J3KT08 172 aa8.87□□□□□ -0.99
NEK9-204ENST00000554258 DEFB116Q30KQ4 102 aa8.87□□□□□ -0.99
NEK9-204ENST00000554258 Q6ZVQ6 151 aa8.84□□□□□ -0.99
NEK9-204ENST00000554258 SIGMAR1Q99720 223 aa8.83□□□□□ -1
NEK9-204ENST00000554258 MUC12Q9UKN1 5478 aa8.83□□□□□ -1
NEK9-204ENST00000554258 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
NEK9-204ENST00000554258 ACYP1P07311 99 aa8.81□□□□□ -1
NEK9-204ENST00000554258 A8MWP4 228 aa8.79□□□□□ -1
NEK9-204ENST00000554258 DSCR10P59022 87 aa8.79□□□□□ -1
NEK9-204ENST00000554258 UBL5Q9BZL1 73 aa8.79□□□□□ -1
NEK9-204ENST00000554258 A0A1B0GVX0 72 aa8.78□□□□□ -1
NEK9-204ENST00000554258 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
NEK9-204ENST00000554258 MT2AP02795 61 aa8.77□□□□□ -1.01
NEK9-204ENST00000554258 IGKV3D-7A0A0C4DH55 119 aa8.76□□□□□ -1.01
NEK9-204ENST00000554258 BPY2O14599 106 aa8.76□□□□□ -1.01
NEK9-204ENST00000554258 NDUFB1O75438 58 aa8.75□□□□□ -1.01
NEK9-204ENST00000554258 LINC00313P59037 77 aa8.75□□□□□ -1.01
NEK9-204ENST00000554258 NOTCH2NLQ7Z3S9 236 aa8.75□□□□□ -1.01
NEK9-204ENST00000554258 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
NEK9-204ENST00000554258 IGHV6-1A0A0B4J1U7 121 aa8.74□□□□□ -1.01
NEK9-204ENST00000554258 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
NEK9-204ENST00000554258 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
NEK9-204ENST00000554258 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
NEK9-204ENST00000554258 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
NEK9-204ENST00000554258 J3QR89 54 aa8.7□□□□□ -1.02
NEK9-204ENST00000554258 MT1FP04733 61 aa8.7□□□□□ -1.02
NEK9-204ENST00000554258 C20orf166-AS1Q96NR2 134 aa8.7□□□□□ -1.02
NEK9-204ENST00000554258 K7EQZ3 153 aa8.69□□□□□ -1.02
NEK9-204ENST00000554258 Q75L30 129 aa8.69□□□□□ -1.02
NEK9-204ENST00000554258 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
NEK9-204ENST00000554258 A8MUU9 505 aa8.68□□□□□ -1.02
NEK9-204ENST00000554258 CXCL6P80162 114 aa8.68□□□□□ -1.02
NEK9-204ENST00000554258 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
NEK9-204ENST00000554258 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
NEK9-204ENST00000554258 LINC00643Q86TS7 51 aa8.63□□□□□ -1.03
NEK9-204ENST00000554258 Q8N9L7 120 aa8.63□□□□□ -1.03
NEK9-204ENST00000554258 ATP5EP2Q5VTU8 51 aa8.61□□□□□ -1.03
NEK9-204ENST00000554258 Q8N9P0 234 aaPredicted RBP8.61□□□□□ -1.03
NEK9-204ENST00000554258 K7ERU9 68 aa8.59□□□□□ -1.03
NEK9-204ENST00000554258 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
NEK9-204ENST00000554258 hDV103S1A0JD37 113 aa8.57□□□□□ -1.04
NEK9-204ENST00000554258 MRPL34Q9BQ48 92 aaKnown RBP8.56□□□□□ -1.04
NEK9-204ENST00000554258 ATP11AUNQ6ZP68 121 aa8.54□□□□□ -1.04
NEK9-204ENST00000554258 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
NEK9-204ENST00000554258 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
NEK9-204ENST00000554258 WFDC13Q8IUB5 93 aa8.51□□□□□ -1.05
NEK9-204ENST00000554258 ZCCHC13Q8WW36 166 aaKnown RBP8.47□□□□□ -1.05
NEK9-204ENST00000554258 KMT2DO14686 5537 aa8.45□□□□□ -1.06
NEK9-204ENST00000554258 MDN1Q9NU22 5596 aa8.45□□□□□ -1.06
NEK9-204ENST00000554258 HIST1H4AP62805 103 aaKnown RBP8.44□□□□□ -1.06
NEK9-204ENST00000554258 A0A087WVE0 104 aa8.4□□□□□ -1.06
NEK9-204ENST00000554258 NDUFS5O43920 106 aa8.4□□□□□ -1.06
NEK9-204ENST00000554258 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
NEK9-204ENST00000554258 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
NEK9-204ENST00000554258 Q5W150 140 aa8.38□□□□□ -1.07
NEK9-204ENST00000554258 KRTAP2-3P0C7H8 128 aa8.37□□□□□ -1.07
NEK9-204ENST00000554258 KRTAP2-4Q9BYR9 128 aa8.37□□□□□ -1.07
NEK9-204ENST00000554258 TP53AIP1Q9HCN2 124 aa8.37□□□□□ -1.07
NEK9-204ENST00000554258 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
NEK9-204ENST00000554258 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
NEK9-204ENST00000554258 SPINK7P58062 85 aa8.3□□□□□ -1.08
NEK9-204ENST00000554258 HRES1P13985 223 aa8.27□□□□□ -1.09
NEK9-204ENST00000554258 MPLKIPQ8TAP9 179 aa8.27□□□□□ -1.09
NEK9-204ENST00000554258 UQCRQO14949 82 aa8.26□□□□□ -1.09
NEK9-204ENST00000554258 OCR1Q9BZK8 76 aa8.25□□□□□ -1.09
NEK9-204ENST00000554258 GPR98Q8WXG9 6306 aa8.21□□□□□ -1.09
NEK9-204ENST00000554258 IGKV2-30P06310 120 aa8.21□□□□□ -1.1
NEK9-204ENST00000554258 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
NEK9-204ENST00000554258 TRAV22A0A0B4J277 110 aa8.2□□□□□ -1.1
NEK9-204ENST00000554258 KRTAP5-9P26371 169 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms