RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 COLCA2A8K830 154 aa1.41□□□□□ -2.18
SLIRP-202ENST00000553981 SYS1-DBNDD2H3BUS1 97 aa1.41□□□□□ -2.18
SLIRP-202ENST00000553981 LST1O00453 97 aa1.41□□□□□ -2.18
SLIRP-202ENST00000553981 APOC3P02656 99 aa1.41□□□□□ -2.18
SLIRP-202ENST00000553981 HERVK_113P61574 105 aa1.41□□□□□ -2.18
SLIRP-202ENST00000553981 DEFB116Q30KQ4 102 aa1.41□□□□□ -2.18
SLIRP-202ENST00000553981 GPR98Q8WXG9 6306 aa1.4□□□□□ -2.19
SLIRP-202ENST00000553981 A0A087WSZ3 146 aa1.4□□□□□ -2.19
SLIRP-202ENST00000553981 A6NN06 94 aa1.4□□□□□ -2.19
SLIRP-202ENST00000553981 C3orf79P0CE67 100 aa1.4□□□□□ -2.19
SLIRP-202ENST00000553981 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
SLIRP-202ENST00000553981 ATOH7Q8N100 152 aa1.4□□□□□ -2.19
SLIRP-202ENST00000553981 LINC00846Q9NV44 126 aa1.4□□□□□ -2.19
SLIRP-202ENST00000553981 hADV29S1A0JD25 119 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 A8MWP4 228 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 SPINK7P58062 85 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 Q6JHZ5 121 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 SLC7A5P1Q8MH63 180 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 LINC00472Q9H8W2 130 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 RBM12B-AS1Q9P1G2 102 aa1.39□□□□□ -2.19
SLIRP-202ENST00000553981 TRAV13-2A0A0B4J235 113 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BKO60814 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BJP06899 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BOP23527 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BBP33778 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BDP58876 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 LINC00313P59037 77 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BCP62807 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST2H2BEQ16778 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.38□□□□□ -2.19
SLIRP-202ENST00000553981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BHQ93079 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 C12orf57Q99622 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BNQ99877 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 HIST1H2BMQ99879 126 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
SLIRP-202ENST00000553981 F8WEM9 126 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 SNAPINO95295 136 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 IGKV4-1P06312 121 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 IFITM1P13164 125 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 SPRR2EP22531 72 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 SPRR2BP35325 72 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 SPRR2AP35326 72 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 TEN1Q86WV5 123 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 SVBPQ8N300 66 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 ZCCHC13Q8WW36 166 aaKnown RBP1.37□□□□□ -2.19
SLIRP-202ENST00000553981 SPRR2GQ9BYE4 73 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 CBY1Q9Y3M2 126 aa1.37□□□□□ -2.19
SLIRP-202ENST00000553981 SCGB1D4Q6XE38 83 aa1.36□□□□□ -2.19
SLIRP-202ENST00000553981 WFDC13Q8IUB5 93 aa1.36□□□□□ -2.19
SLIRP-202ENST00000553981 SPRR2FQ96RM1 72 aa1.36□□□□□ -2.19
SLIRP-202ENST00000553981 SIGMAR1Q99720 223 aa1.36□□□□□ -2.19
SLIRP-202ENST00000553981 IGHV6-1A0A0B4J1U7 121 aa1.35□□□□□ -2.19
SLIRP-202ENST00000553981 A0A1B0GV72 72 aa1.35□□□□□ -2.19
SLIRP-202ENST00000553981 RBM3P98179 157 aaKnown RBP1.35□□□□□ -2.19
SLIRP-202ENST00000553981 Q8N9L7 120 aa1.35□□□□□ -2.19
SLIRP-202ENST00000553981 SNHG12Q9BXW3 62 aa1.35□□□□□ -2.19
SLIRP-202ENST00000553981 NHP2Q9NX24 153 aaKnown RBP1.35□□□□□ -2.19
SLIRP-202ENST00000553981 H3BMG7 143 aa1.34□□□□□ -2.19
SLIRP-202ENST00000553981 KRTDAPP60985 99 aa1.34□□□□□ -2.19
SLIRP-202ENST00000553981 MT1XP80297 61 aa1.34□□□□□ -2.19
SLIRP-202ENST00000553981 H1FX-AS1Q4G0G2 97 aa1.34□□□□□ -2.19
SLIRP-202ENST00000553981 Q5VV11 94 aa1.34□□□□□ -2.19
SLIRP-202ENST00000553981 SPRR5A0A1B0GTR4 108 aa1.33□□□□□ -2.2
SLIRP-202ENST00000553981 A0A1B0GVX0 72 aa1.33□□□□□ -2.2
SLIRP-202ENST00000553981 COA6Q5JTJ3 125 aaKnown RBP1.33□□□□□ -2.2
SLIRP-202ENST00000553981 Q5W150 140 aa1.33□□□□□ -2.2
SLIRP-202ENST00000553981 PPDPFLQ8WWR9 84 aa1.33□□□□□ -2.2
SLIRP-202ENST00000553981 SS18L2Q9UHA2 77 aa1.33□□□□□ -2.2
SLIRP-202ENST00000553981 TRBV7-4A0A0J9YYF1 115 aa1.32□□□□□ -2.2
SLIRP-202ENST00000553981 SPRR2DP22532 72 aa1.32□□□□□ -2.2
SLIRP-202ENST00000553981 VAMP3Q15836 100 aa1.32□□□□□ -2.2
SLIRP-202ENST00000553981 C2orf91Q6ZV80 131 aa1.32□□□□□ -2.2
SLIRP-202ENST00000553981 RAB37Q96AX2 223 aa1.32□□□□□ -2.2
SLIRP-202ENST00000553981 A0A087WVE0 104 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 IGKV3D-7A0A0C4DH55 119 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 C8orf87E5RJ46 101 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 FABP2P12104 132 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 C5orf47Q569G3 176 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 BVES-AS1Q5T3Y7 98 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 MTURNQ8N3F0 131 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 C8orf17Q9NRJ1 99 aa1.31□□□□□ -2.2
SLIRP-202ENST00000553981 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
SLIRP-202ENST00000553981 CCKP06307 115 aa1.3□□□□□ -2.2
SLIRP-202ENST00000553981 FXYD2P54710 66 aa1.3□□□□□ -2.2
SLIRP-202ENST00000553981 NDUFA5Q16718 116 aa1.3□□□□□ -2.2
SLIRP-202ENST00000553981 ANKRD29Q8N6D5 301 aa1.3□□□□□ -2.2
SLIRP-202ENST00000553981 A0A0B4J2C4 111 aa1.29□□□□□ -2.2
SLIRP-202ENST00000553981 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
SLIRP-202ENST00000553981 C4orf26Q17RF5 130 aa1.29□□□□□ -2.2
SLIRP-202ENST00000553981 LCA10Q71F78 164 aa1.29□□□□□ -2.2
SLIRP-202ENST00000553981 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
SLIRP-202ENST00000553981 HIST3H2BBQ8N257 126 aa1.29□□□□□ -2.2
SLIRP-202ENST00000553981 HIST1H2BLQ99880 126 aa1.29□□□□□ -2.2
SLIRP-202ENST00000553981 A0A1B0GX51 115 aa1.28□□□□□ -2.2
SLIRP-202ENST00000553981 H0YGX0 51 aa1.28□□□□□ -2.2
SLIRP-202ENST00000553981 K7ERJ3 54 aa1.28□□□□□ -2.2
SLIRP-202ENST00000553981 TRACP01848 142 aa1.28□□□□□ -2.2
SLIRP-202ENST00000553981 COX8AP10176 69 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms