RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 HECTD4Q9Y4D8 3996 aa3.01□□□□□ -1.93
VTI1B-202ENST00000553619 IGLV8-61A0A075B6I0 122 aa3□□□□□ -1.93
VTI1B-202ENST00000553619 SMIM29Q86T20 159 aa3□□□□□ -1.93
VTI1B-202ENST00000553619 PRR15Q8IV56 129 aa3□□□□□ -1.93
VTI1B-202ENST00000553619 DNAH2Q9P225 4427 aa3□□□□□ -1.93
VTI1B-202ENST00000553619 HYDINQ4G0P3 5121 aa3□□□□□ -1.93
VTI1B-202ENST00000553619 DNAH10Q8IVF4 4471 aa2.99□□□□□ -1.93
VTI1B-202ENST00000553619 LOC110117498A0A087WWA1 95 aa2.99□□□□□ -1.93
VTI1B-202ENST00000553619 CCKP06307 115 aa2.99□□□□□ -1.93
VTI1B-202ENST00000553619 HIST1H4AP62805 103 aaKnown RBP2.99□□□□□ -1.93
VTI1B-202ENST00000553619 Q5VSD8 79 aa2.99□□□□□ -1.93
VTI1B-202ENST00000553619 Q8NBF4 154 aa2.99□□□□□ -1.93
VTI1B-202ENST00000553619 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
VTI1B-202ENST00000553619 C14orf132Q9NPU4 83 aa2.99□□□□□ -1.93
VTI1B-202ENST00000553619 IGLV9-49A0A0B4J1Y8 123 aa2.98□□□□□ -1.93
VTI1B-202ENST00000553619 TRBV7-4A0A0J9YYF1 115 aa2.98□□□□□ -1.93
VTI1B-202ENST00000553619 Q6ZQT0 140 aa2.97□□□□□ -1.93
VTI1B-202ENST00000553619 TYMSOSQ8TAI1 123 aa2.97□□□□□ -1.93
VTI1B-202ENST00000553619 NDUFS5O43920 106 aa2.96□□□□□ -1.94
VTI1B-202ENST00000553619 KRTAP10-4P60372 401 aaPredicted RBP2.96□□□□□ -1.94
VTI1B-202ENST00000553619 MOBPQ13875 183 aa2.96□□□□□ -1.94
VTI1B-202ENST00000553619 ATP5EP2Q5VTU8 51 aa2.96□□□□□ -1.94
VTI1B-202ENST00000553619 SPAG11AQ6PDA7 123 aa2.96□□□□□ -1.94
VTI1B-202ENST00000553619 IGFL1Q6UW32 110 aa2.96□□□□□ -1.94
VTI1B-202ENST00000553619 ANAPC11Q9NYG5 84 aa2.96□□□□□ -1.94
VTI1B-202ENST00000553619 PCLOQ9Y6V0 5065 aa2.95□□□□□ -1.94
VTI1B-202ENST00000553619 KRTAP1-4P0C5Y4 121 aa2.95□□□□□ -1.94
VTI1B-202ENST00000553619 NREPQ16612 68 aa2.95□□□□□ -1.94
VTI1B-202ENST00000553619 UBL5Q9BZL1 73 aa2.95□□□□□ -1.94
VTI1B-202ENST00000553619 SACSQ9NZJ4 4579 aa2.95□□□□□ -1.94
VTI1B-202ENST00000553619 PKD1P98161 4303 aa2.95□□□□□ -1.94
VTI1B-202ENST00000553619 RYR1P21817 5038 aa2.95□□□□□ -1.94
VTI1B-202ENST00000553619 DNAH8Q96JB1 4490 aa2.94□□□□□ -1.94
VTI1B-202ENST00000553619 SPINK1P00995 79 aa2.94□□□□□ -1.94
VTI1B-202ENST00000553619 OXTP01178 125 aa2.94□□□□□ -1.94
VTI1B-202ENST00000553619 EPPK1P58107 5090 aaKnown RBP2.94□□□□□ -1.94
VTI1B-202ENST00000553619 FAT2Q9NYQ8 4349 aa2.94□□□□□ -1.94
VTI1B-202ENST00000553619 A0A087X002 238 aa2.93□□□□□ -1.94
VTI1B-202ENST00000553619 A0A1W2PNM2 257 aa2.93□□□□□ -1.94
VTI1B-202ENST00000553619 KRTAP13-2Q52LG2 175 aa2.93□□□□□ -1.94
VTI1B-202ENST00000553619 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
VTI1B-202ENST00000553619 RYR2Q92736 4967 aa2.93□□□□□ -1.94
VTI1B-202ENST00000553619 A0A087WSZ3 146 aa2.92□□□□□ -1.94
VTI1B-202ENST00000553619 RPS29P62273 56 aaKnown RBP2.92□□□□□ -1.94
VTI1B-202ENST00000553619 LINC00304Q8N9R0 145 aa2.92□□□□□ -1.94
VTI1B-202ENST00000553619 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
VTI1B-202ENST00000553619 DNAH11Q96DT5 4516 aa2.92□□□□□ -1.94
VTI1B-202ENST00000553619 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
VTI1B-202ENST00000553619 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
VTI1B-202ENST00000553619 KLKP1Q107X0 134 aa2.91□□□□□ -1.94
VTI1B-202ENST00000553619 ASB16-AS1Q495Z4 193 aa2.91□□□□□ -1.94
VTI1B-202ENST00000553619 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
VTI1B-202ENST00000553619 LINC00846Q9NV44 126 aa2.91□□□□□ -1.94
VTI1B-202ENST00000553619 TRAV7A0A075B6U4 112 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 A0A0G2JQZ4 141 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 BPY2O14599 106 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 NDUFB1O75438 58 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 Q6ZVQ6 151 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 HERC2O95714 4834 aa2.9□□□□□ -1.95
VTI1B-202ENST00000553619 SEC61BP60468 96 aaKnown RBP2.89□□□□□ -1.95
VTI1B-202ENST00000553619 CXCL6P80162 114 aa2.89□□□□□ -1.95
VTI1B-202ENST00000553619 H7BZZ5 65 aa2.88□□□□□ -1.95
VTI1B-202ENST00000553619 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
VTI1B-202ENST00000553619 FP248Q71RG6 208 aaPredicted RBP2.88□□□□□ -1.95
VTI1B-202ENST00000553619 LRP1BQ9NZR2 4599 aa2.88□□□□□ -1.95
VTI1B-202ENST00000553619 IGKV4-1P06312 121 aa2.87□□□□□ -1.95
VTI1B-202ENST00000553619 Q1T7F1 81 aa2.87□□□□□ -1.95
VTI1B-202ENST00000553619 LINC00472Q9H8W2 130 aa2.87□□□□□ -1.95
VTI1B-202ENST00000553619 RBM12B-AS1Q9P1G2 102 aa2.87□□□□□ -1.95
VTI1B-202ENST00000553619 DYNC1H1Q14204 4646 aaKnown RBP2.86□□□□□ -1.95
VTI1B-202ENST00000553619 C20orf197Q8N268 126 aa2.86□□□□□ -1.95
VTI1B-202ENST00000553619 IGKV3D-7A0A0C4DH55 119 aa2.85□□□□□ -1.95
VTI1B-202ENST00000553619 A8MWP4 228 aa2.85□□□□□ -1.95
VTI1B-202ENST00000553619 ATP11AUNQ6ZP68 121 aa2.85□□□□□ -1.95
VTI1B-202ENST00000553619 LCA10Q71F78 164 aa2.85□□□□□ -1.95
VTI1B-202ENST00000553619 VPS13BQ7Z7G8 4022 aa2.85□□□□□ -1.95
VTI1B-202ENST00000553619 C8orf87E5RJ46 101 aa2.84□□□□□ -1.95
VTI1B-202ENST00000553619 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.95
VTI1B-202ENST00000553619 Q96NJ1 140 aa2.84□□□□□ -1.95
VTI1B-202ENST00000553619 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 A0A1B0GVX0 72 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 MT1HL1P0DM35 61 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 DSCR10P59022 87 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 LINC00313P59037 77 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 CYP4F30PQ9H0H9 118 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 CYSTM1Q9H1C7 97 aa2.83□□□□□ -1.96
VTI1B-202ENST00000553619 FLG2Q5D862 2391 aaPredicted RBP2.81□□□□□ -1.96
VTI1B-202ENST00000553619 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
VTI1B-202ENST00000553619 K7EQZ3 153 aa2.81□□□□□ -1.96
VTI1B-202ENST00000553619 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
VTI1B-202ENST00000553619 C8orf17Q9NRJ1 99 aa2.81□□□□□ -1.96
VTI1B-202ENST00000553619 APOBP04114 4563 aaKnown RBP2.81□□□□□ -1.96
VTI1B-202ENST00000553619 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
VTI1B-202ENST00000553619 IGLV7-46A0A075B6I9 117 aa2.8□□□□□ -1.96
VTI1B-202ENST00000553619 hDV103S1A0JD37 113 aa2.8□□□□□ -1.96
VTI1B-202ENST00000553619 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms