RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 IGKV4-1P06312 121 aa12.72□□□□□ -0.37
TDP1-205ENST00000553527 DEFB116Q30KQ4 102 aa12.7□□□□□ -0.38
TDP1-205ENST00000553527 RPL37P61927 97 aaKnown RBP12.66□□□□□ -0.38
TDP1-205ENST00000553527 NREPQ16612 68 aa12.65□□□□□ -0.38
TDP1-205ENST00000553527 J3KT08 172 aa12.64□□□□□ -0.39
TDP1-205ENST00000553527 DSCR10P59022 87 aa12.55□□□□□ -0.4
TDP1-205ENST00000553527 Q6ZVQ6 151 aa12.55□□□□□ -0.4
TDP1-205ENST00000553527 IGHV6-1A0A0B4J1U7 121 aa12.54□□□□□ -0.4
TDP1-205ENST00000553527 A0A1B0GVX0 72 aa12.54□□□□□ -0.4
TDP1-205ENST00000553527 LINC00846Q9NV44 126 aa12.53□□□□□ -0.4
TDP1-205ENST00000553527 NDUFB1O75438 58 aa12.52□□□□□ -0.41
TDP1-205ENST00000553527 UBL5Q9BZL1 73 aa12.52□□□□□ -0.41
TDP1-205ENST00000553527 A8MWP4 228 aa12.51□□□□□ -0.41
TDP1-205ENST00000553527 LINC00313P59037 77 aa12.51□□□□□ -0.41
TDP1-205ENST00000553527 BPY2O14599 106 aa12.49□□□□□ -0.41
TDP1-205ENST00000553527 LCE2CQ5TA81 110 aa12.48□□□□□ -0.41
TDP1-205ENST00000553527 ATP11AUNQ6ZP68 121 aa12.48□□□□□ -0.41
TDP1-205ENST00000553527 C8orf87E5RJ46 101 aa12.47□□□□□ -0.41
TDP1-205ENST00000553527 Q75L30 129 aa12.47□□□□□ -0.41
TDP1-205ENST00000553527 IGKV3D-7A0A0C4DH55 119 aa12.45□□□□□ -0.42
TDP1-205ENST00000553527 KRTAP19-2Q3LHN2 52 aa12.45□□□□□ -0.42
TDP1-205ENST00000553527 NOTCH2NLQ7Z3S9 236 aa12.44□□□□□ -0.42
TDP1-205ENST00000553527 ACYP1P07311 99 aa12.42□□□□□ -0.42
TDP1-205ENST00000553527 FAM240AA0A1B0GVK7 77 aa12.41□□□□□ -0.42
TDP1-205ENST00000553527 PRR15Q8IV56 129 aa12.41□□□□□ -0.42
TDP1-205ENST00000553527 KRTAP16-1A8MUX0 517 aa12.39□□□□□ -0.43
TDP1-205ENST00000553527 K7EQZ3 153 aa12.39□□□□□ -0.43
TDP1-205ENST00000553527 C20orf166-AS1Q96NR2 134 aa12.38□□□□□ -0.43
TDP1-205ENST00000553527 KRTAP9-2Q9BYQ4 174 aa12.38□□□□□ -0.43
TDP1-205ENST00000553527 C8orf17Q9NRJ1 99 aa12.38□□□□□ -0.43
TDP1-205ENST00000553527 A8MUU9 505 aa12.36□□□□□ -0.43
TDP1-205ENST00000553527 COX6B2Q6YFQ2 88 aa12.35□□□□□ -0.43
TDP1-205ENST00000553527 MT1HP80294 61 aa12.33□□□□□ -0.44
TDP1-205ENST00000553527 Q8N9L7 120 aa12.33□□□□□ -0.44
TDP1-205ENST00000553527 MMP24-AS1A0A0U1RRL7 71 aa12.3□□□□□ -0.44
TDP1-205ENST00000553527 J3QR89 54 aa12.29□□□□□ -0.44
TDP1-205ENST00000553527 CXCL6P80162 114 aa12.28□□□□□ -0.44
TDP1-205ENST00000553527 TMEM254Q8TBM7 123 aa12.24□□□□□ -0.45
TDP1-205ENST00000553527 hDV103S1A0JD37 113 aa12.23□□□□□ -0.45
TDP1-205ENST00000553527 M0R2T5 61 aa12.21□□□□□ -0.45
TDP1-205ENST00000553527 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.45
TDP1-205ENST00000553527 Q8N9P0 234 aaPredicted RBP12.2□□□□□ -0.46
TDP1-205ENST00000553527 MRPL34Q9BQ48 92 aaKnown RBP12.2□□□□□ -0.46
TDP1-205ENST00000553527 WFDC13Q8IUB5 93 aa12.19□□□□□ -0.46
TDP1-205ENST00000553527 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
TDP1-205ENST00000553527 HCG22E2RYF7 251 aa12.15□□□□□ -0.46
TDP1-205ENST00000553527 LINC00643Q86TS7 51 aa12.15□□□□□ -0.46
TDP1-205ENST00000553527 NDUFS5O43920 106 aa12.12□□□□□ -0.47
TDP1-205ENST00000553527 ZCCHC13Q8WW36 166 aaKnown RBP12.1□□□□□ -0.47
TDP1-205ENST00000553527 K7ERU9 68 aa12.08□□□□□ -0.48
TDP1-205ENST00000553527 KRTAP10-6P60371 365 aaPredicted RBP12.08□□□□□ -0.48
TDP1-205ENST00000553527 FLGP20930 4061 aaPredicted RBP12.07□□□□□ -0.48
TDP1-205ENST00000553527 HIST1H4AP62805 103 aaKnown RBP12.06□□□□□ -0.48
TDP1-205ENST00000553527 LORP23490 312 aaPredicted RBP12.04□□□□□ -0.48
TDP1-205ENST00000553527 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
TDP1-205ENST00000553527 FAM236DA0A1B0GTK5 79 aa11.96□□□□□ -0.49
TDP1-205ENST00000553527 FAM236CP0DP71 79 aa11.96□□□□□ -0.49
TDP1-205ENST00000553527 A0A087WVE0 104 aa11.93□□□□□ -0.5
TDP1-205ENST00000553527 KRTAP9-6A0A140TA67 174 aa11.91□□□□□ -0.5
TDP1-205ENST00000553527 RBM12B-AS1Q9P1G2 102 aa11.91□□□□□ -0.5
TDP1-205ENST00000553527 HRES1P13985 223 aa11.9□□□□□ -0.5
TDP1-205ENST00000553527 Q5W150 140 aa11.88□□□□□ -0.51
TDP1-205ENST00000553527 TP53AIP1Q9HCN2 124 aa11.88□□□□□ -0.51
TDP1-205ENST00000553527 SPINK7P58062 85 aa11.87□□□□□ -0.51
TDP1-205ENST00000553527 MPLKIPQ8TAP9 179 aa11.83□□□□□ -0.52
TDP1-205ENST00000553527 FSIP2Q5CZC0 6907 aa11.81□□□□□ -0.52
TDP1-205ENST00000553527 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
TDP1-205ENST00000553527 IGKV2D-30A0A075B6S6 120 aa11.78□□□□□ -0.52
TDP1-205ENST00000553527 IGKV2-30P06310 120 aa11.78□□□□□ -0.52
TDP1-205ENST00000553527 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
TDP1-205ENST00000553527 IMUPQ9GZP8 106 aa11.75□□□□□ -0.53
TDP1-205ENST00000553527 CRCT1Q9UGL9 99 aa11.72□□□□□ -0.53
TDP1-205ENST00000553527 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
TDP1-205ENST00000553527 UQCRQO14949 82 aa11.7□□□□□ -0.54
TDP1-205ENST00000553527 KRTAP9-8Q9BYQ0 159 aa11.68□□□□□ -0.54
TDP1-205ENST00000553527 SCGB1A1P11684 91 aa11.65□□□□□ -0.54
TDP1-205ENST00000553527 OCR1Q9BZK8 76 aa11.63□□□□□ -0.55
TDP1-205ENST00000553527 H0Y9P7 68 aa11.62□□□□□ -0.55
TDP1-205ENST00000553527 ATOX1O00244 68 aa11.59□□□□□ -0.55
TDP1-205ENST00000553527 FAM236AA0A1B0GUQ0 79 aa11.58□□□□□ -0.56
TDP1-205ENST00000553527 FAM236BA0A1B0GV22 79 aa11.58□□□□□ -0.56
TDP1-205ENST00000553527 LOC101927531A0A1B0GV80 90 aa11.58□□□□□ -0.56
TDP1-205ENST00000553527 MT2AP02795 61 aa11.53□□□□□ -0.56
TDP1-205ENST00000553527 MP68P56378 58 aa11.52□□□□□ -0.57
TDP1-205ENST00000553527 CYP4F30PQ9H0H9 118 aa11.52□□□□□ -0.57
TDP1-205ENST00000553527 C4orf26Q17RF5 130 aa11.49□□□□□ -0.57
TDP1-205ENST00000553527 C5orf47Q569G3 176 aa11.48□□□□□ -0.57
TDP1-205ENST00000553527 C1orf64Q8NEQ6 169 aa11.47□□□□□ -0.57
TDP1-205ENST00000553527 LINC00208Q96KT6 92 aa11.47□□□□□ -0.57
TDP1-205ENST00000553527 KRTAP10-10P60014 251 aa11.46□□□□□ -0.57
TDP1-205ENST00000553527 SMIM20Q8N5G0 67 aa11.46□□□□□ -0.57
TDP1-205ENST00000553527 MT1FP04733 61 aa11.45□□□□□ -0.58
TDP1-205ENST00000553527 TRAV7A0A075B6U4 112 aa11.41□□□□□ -0.58
TDP1-205ENST00000553527 H3BPC8 53 aa11.4□□□□□ -0.58
TDP1-205ENST00000553527 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
TDP1-205ENST00000553527 KLKP1Q107X0 134 aa11.3□□□□□ -0.6
TDP1-205ENST00000553527 KRTAP9-3Q9BYQ3 159 aa11.3□□□□□ -0.6
TDP1-205ENST00000553527 KRTAP3-1Q9BYR8 98 aa11.29□□□□□ -0.6
TDP1-205ENST00000553527 LCE2BO14633 110 aa11.25□□□□□ -0.61
TDP1-205ENST00000553527 SERP2Q8N6R1 65 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms