RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 SPINK8P0C7L1 97 aa4.19□□□□□ -1.74
PPFIA2-228ENST00000553058 TRAV12-1A0A0B4J245 112 aa4.17□□□□□ -1.74
PPFIA2-228ENST00000553058 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
PPFIA2-228ENST00000553058 ATOH7Q8N100 152 aa4.17□□□□□ -1.74
PPFIA2-228ENST00000553058 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
PPFIA2-228ENST00000553058 A0A087WSZ3 146 aa4.16□□□□□ -1.74
PPFIA2-228ENST00000553058 IGLC3P0DOY3 106 aa4.16□□□□□ -1.74
PPFIA2-228ENST00000553058 MEIG1Q5JSS6 88 aa4.16□□□□□ -1.74
PPFIA2-228ENST00000553058 TMEM218A2RU14 115 aa4.15□□□□□ -1.75
PPFIA2-228ENST00000553058 A6NN06 94 aa4.15□□□□□ -1.75
PPFIA2-228ENST00000553058 PRLHP81277 87 aa4.15□□□□□ -1.75
PPFIA2-228ENST00000553058 ASB16-AS1Q495Z4 193 aa4.15□□□□□ -1.75
PPFIA2-228ENST00000553058 FAM19A2Q8N3H0 131 aa4.15□□□□□ -1.75
PPFIA2-228ENST00000553058 ZNF625Q96I27 306 aaPredicted RBP4.14□□□□□ -1.75
PPFIA2-228ENST00000553058 LINC01549A6NIU2 74 aa4.13□□□□□ -1.75
PPFIA2-228ENST00000553058 KRTAP4-1Q9BYQ7 146 aa4.13□□□□□ -1.75
PPFIA2-228ENST00000553058 LOC107984156A0A0G2JMH3 177 aa4.12□□□□□ -1.75
PPFIA2-228ENST00000553058 C20orf202A1L168 122 aa4.12□□□□□ -1.75
PPFIA2-228ENST00000553058 H3BRM9 83 aa4.12□□□□□ -1.75
PPFIA2-228ENST00000553058 ERC2-IT1O76042 136 aa4.12□□□□□ -1.75
PPFIA2-228ENST00000553058 ARL17AQ8IVW1 177 aa4.12□□□□□ -1.75
PPFIA2-228ENST00000553058 SPRR4Q96PI1 79 aa4.12□□□□□ -1.75
PPFIA2-228ENST00000553058 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
PPFIA2-228ENST00000553058 P0C880 135 aa4.11□□□□□ -1.75
PPFIA2-228ENST00000553058 COX17Q14061 63 aa4.11□□□□□ -1.75
PPFIA2-228ENST00000553058 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
PPFIA2-228ENST00000553058 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
PPFIA2-228ENST00000553058 SPRR1AP35321 89 aa4.1□□□□□ -1.75
PPFIA2-228ENST00000553058 PMCHL1Q16048 86 aa4.1□□□□□ -1.75
PPFIA2-228ENST00000553058 Q1T7F1 81 aa4.1□□□□□ -1.75
PPFIA2-228ENST00000553058 C18orf32Q8TCD1 76 aa4.1□□□□□ -1.75
PPFIA2-228ENST00000553058 SEC11CQ9BY50 192 aa4.1□□□□□ -1.75
PPFIA2-228ENST00000553058 SPAG11AQ6PDA7 123 aa4.08□□□□□ -1.76
PPFIA2-228ENST00000553058 FP248Q71RG6 208 aaPredicted RBP4.08□□□□□ -1.76
PPFIA2-228ENST00000553058 BAGE3Q86Y29 109 aa4.08□□□□□ -1.76
PPFIA2-228ENST00000553058 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
PPFIA2-228ENST00000553058 SMCO4Q9NRQ5 59 aa4.08□□□□□ -1.76
PPFIA2-228ENST00000553058 LINC01545Q5VT33 79 aa4.07□□□□□ -1.76
PPFIA2-228ENST00000553058 CASC2Q6XLA1 102 aa4.07□□□□□ -1.76
PPFIA2-228ENST00000553058 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
PPFIA2-228ENST00000553058 LINC00158P58513 81 aa4.06□□□□□ -1.76
PPFIA2-228ENST00000553058 TMEM170BQ5T4T1 132 aa4.06□□□□□ -1.76
PPFIA2-228ENST00000553058 SFTA2Q6UW10 78 aa4.06□□□□□ -1.76
PPFIA2-228ENST00000553058 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
PPFIA2-228ENST00000553058 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
PPFIA2-228ENST00000553058 TRBV10-3A0A0K0K1G6 114 aa4.04□□□□□ -1.76
PPFIA2-228ENST00000553058 NCR3O14931 201 aa4.04□□□□□ -1.76
PPFIA2-228ENST00000553058 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
PPFIA2-228ENST00000553058 SPINK1P00995 79 aa4.03□□□□□ -1.76
PPFIA2-228ENST00000553058 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
PPFIA2-228ENST00000553058 COPS9Q8WXC6 57 aa4.02□□□□□ -1.77
PPFIA2-228ENST00000553058 IFI27L1Q96BM0 104 aa4.02□□□□□ -1.77
PPFIA2-228ENST00000553058 NDUFA12Q9UI09 145 aa4.02□□□□□ -1.77
PPFIA2-228ENST00000553058 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
PPFIA2-228ENST00000553058 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
PPFIA2-228ENST00000553058 ETDCA0A1B0GVM5 59 aa4.01□□□□□ -1.77
PPFIA2-228ENST00000553058 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
PPFIA2-228ENST00000553058 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
PPFIA2-228ENST00000553058 USH2AO75445 5202 aa4□□□□□ -1.77
PPFIA2-228ENST00000553058 SSBP3-AS1Q7Z2R9 100 aa4□□□□□ -1.77
PPFIA2-228ENST00000553058 Q6ZRX8 168 aa3.99□□□□□ -1.77
PPFIA2-228ENST00000553058 MYMXA0A1B0GTQ4 84 aa3.98□□□□□ -1.77
PPFIA2-228ENST00000553058 APOC3P02656 99 aa3.98□□□□□ -1.77
PPFIA2-228ENST00000553058 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
PPFIA2-228ENST00000553058 MT1HP80294 61 aa3.97□□□□□ -1.77
PPFIA2-228ENST00000553058 SERP1Q9Y6X1 66 aa3.96□□□□□ -1.78
PPFIA2-228ENST00000553058 SPRR1BP22528 89 aa3.95□□□□□ -1.78
PPFIA2-228ENST00000553058 SVBPQ8N300 66 aa3.95□□□□□ -1.78
PPFIA2-228ENST00000553058 PMCHL2Q9BQD1 86 aa3.95□□□□□ -1.78
PPFIA2-228ENST00000553058 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
PPFIA2-228ENST00000553058 PLNP26678 52 aa3.94□□□□□ -1.78
PPFIA2-228ENST00000553058 GTF2H5Q6ZYL4 71 aa3.94□□□□□ -1.78
PPFIA2-228ENST00000553058 LEPROTL1O95214 131 aa3.93□□□□□ -1.78
PPFIA2-228ENST00000553058 PCOTHQ58A44 107 aa3.93□□□□□ -1.78
PPFIA2-228ENST00000553058 F8W1H4 67 aa3.92□□□□□ -1.78
PPFIA2-228ENST00000553058 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
PPFIA2-228ENST00000553058 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
PPFIA2-228ENST00000553058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.92□□□□□ -1.78
PPFIA2-228ENST00000553058 IGKCP01834 107 aa3.91□□□□□ -1.78
PPFIA2-228ENST00000553058 NPC2P61916 151 aa3.91□□□□□ -1.78
PPFIA2-228ENST00000553058 S100A7L2Q5SY68 101 aa3.91□□□□□ -1.78
PPFIA2-228ENST00000553058 ORMDL1Q9P0S3 153 aa3.91□□□□□ -1.78
PPFIA2-228ENST00000553058 COX7CP15954 63 aa3.9□□□□□ -1.79
PPFIA2-228ENST00000553058 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
PPFIA2-228ENST00000553058 LINC00308Q8TCZ7 52 aa3.9□□□□□ -1.79
PPFIA2-228ENST00000553058 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
PPFIA2-228ENST00000553058 HSD52Q0P140 79 aa3.89□□□□□ -1.79
PPFIA2-228ENST00000553058 COA5Q86WW8 74 aa3.89□□□□□ -1.79
PPFIA2-228ENST00000553058 SPANXDQ9BXN6 97 aa3.89□□□□□ -1.79
PPFIA2-228ENST00000553058 ELOF1P60002 83 aaKnown RBP3.88□□□□□ -1.79
PPFIA2-228ENST00000553058 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
PPFIA2-228ENST00000553058 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
PPFIA2-228ENST00000553058 SYS1-DBNDD2H3BUS1 97 aa3.86□□□□□ -1.79
PPFIA2-228ENST00000553058 M0R143 59 aa3.86□□□□□ -1.79
PPFIA2-228ENST00000553058 IGLV5-48A0A075B6I7 105 aa3.85□□□□□ -1.79
PPFIA2-228ENST00000553058 SNCGO76070 127 aa3.85□□□□□ -1.79
PPFIA2-228ENST00000553058 COX7BP24311 80 aa3.85□□□□□ -1.79
PPFIA2-228ENST00000553058 TEX49A0A1B0GTD5 131 aa3.84□□□□□ -1.79
PPFIA2-228ENST00000553058 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.79
PPFIA2-228ENST00000553058 PRO1933Q9H354 126 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms