RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 DPM2O94777 84 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 SCGB1A1P11684 91 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 PLNP26678 52 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 DSCR10P59022 87 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 CLEC2BQ92478 149 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 CHCHD1Q96BP2 118 aaKnown RBP2.55□□□□□ -2
HOXB3-213ENST00000552000 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 SS18L2Q9UHA2 77 aa2.55□□□□□ -2
HOXB3-213ENST00000552000 A0A1B0GVX0 72 aa2.54□□□□□ -2
HOXB3-213ENST00000552000 TMEM218A2RU14 115 aa2.54□□□□□ -2
HOXB3-213ENST00000552000 C8orf17Q9NRJ1 99 aa2.54□□□□□ -2
HOXB3-213ENST00000552000 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2
HOXB3-213ENST00000552000 A6NN06 94 aa2.53□□□□□ -2
HOXB3-213ENST00000552000 IGKCP01834 107 aa2.53□□□□□ -2
HOXB3-213ENST00000552000 LCE1FQ5T754 118 aa2.53□□□□□ -2
HOXB3-213ENST00000552000 NHP2Q9NX24 153 aaKnown RBP2.53□□□□□ -2
HOXB3-213ENST00000552000 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
HOXB3-213ENST00000552000 BPY2O14599 106 aa2.52□□□□□ -2.01
HOXB3-213ENST00000552000 TIMM17BO60830 172 aa2.52□□□□□ -2.01
HOXB3-213ENST00000552000 LEPROTL1O95214 131 aa2.52□□□□□ -2.01
HOXB3-213ENST00000552000 LINC00313P59037 77 aa2.52□□□□□ -2.01
HOXB3-213ENST00000552000 OCIAD2Q56VL3 154 aa2.52□□□□□ -2.01
HOXB3-213ENST00000552000 ZNF815PA8K554 130 aa2.51□□□□□ -2.01
HOXB3-213ENST00000552000 H3BUT2 72 aa2.51□□□□□ -2.01
HOXB3-213ENST00000552000 FABP4P15090 132 aa2.51□□□□□ -2.01
HOXB3-213ENST00000552000 Q6ZQY7 126 aa2.51□□□□□ -2.01
HOXB3-213ENST00000552000 ANKRD29Q8N6D5 301 aa2.51□□□□□ -2.01
HOXB3-213ENST00000552000 TTTY13Q9BZ97 58 aa2.5□□□□□ -2.01
HOXB3-213ENST00000552000 COLCA2A8K830 154 aa2.49□□□□□ -2.01
HOXB3-213ENST00000552000 S100A2P29034 98 aa2.49□□□□□ -2.01
HOXB3-213ENST00000552000 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
HOXB3-213ENST00000552000 CLLU1Q5K131 121 aa2.49□□□□□ -2.01
HOXB3-213ENST00000552000 SMIM11BQ8TCY0 68 aa2.49□□□□□ -2.01
HOXB3-213ENST00000552000 HSPB8Q9UJY1 196 aa2.49□□□□□ -2.01
HOXB3-213ENST00000552000 A0A087WSZ3 146 aa2.48□□□□□ -2.01
HOXB3-213ENST00000552000 hADV29S1A0JD25 119 aa2.48□□□□□ -2.01
HOXB3-213ENST00000552000 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
HOXB3-213ENST00000552000 SNHG12Q9BXW3 62 aa2.48□□□□□ -2.01
HOXB3-213ENST00000552000 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
HOXB3-213ENST00000552000 A8MUN3 132 aa2.46□□□□□ -2.02
HOXB3-213ENST00000552000 MT1BP07438 61 aa2.46□□□□□ -2.02
HOXB3-213ENST00000552000 IFITM1P13164 125 aa2.46□□□□□ -2.02
HOXB3-213ENST00000552000 SPINK7P58062 85 aa2.46□□□□□ -2.02
HOXB3-213ENST00000552000 TEN1Q86WV5 123 aa2.46□□□□□ -2.02
HOXB3-213ENST00000552000 MUSTN1Q8IVN3 82 aa2.46□□□□□ -2.02
HOXB3-213ENST00000552000 COPS9Q8WXC6 57 aa2.46□□□□□ -2.02
HOXB3-213ENST00000552000 A0A1W2PNM2 257 aa2.45□□□□□ -2.02
HOXB3-213ENST00000552000 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
HOXB3-213ENST00000552000 SPRR2EP22531 72 aa2.45□□□□□ -2.02
HOXB3-213ENST00000552000 SPRR2BP35325 72 aa2.45□□□□□ -2.02
HOXB3-213ENST00000552000 SPRR2AP35326 72 aa2.45□□□□□ -2.02
HOXB3-213ENST00000552000 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.45□□□□□ -2.02
HOXB3-213ENST00000552000 WFDC13Q8IUB5 93 aa2.45□□□□□ -2.02
HOXB3-213ENST00000552000 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
HOXB3-213ENST00000552000 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
HOXB3-213ENST00000552000 ZCCHC13Q8WW36 166 aaKnown RBP2.44□□□□□ -2.02
HOXB3-213ENST00000552000 PPDPFLQ8WWR9 84 aa2.44□□□□□ -2.02
HOXB3-213ENST00000552000 SYS1-DBNDD2H3BUS1 97 aa2.43□□□□□ -2.02
HOXB3-213ENST00000552000 APOC3P02656 99 aa2.43□□□□□ -2.02
HOXB3-213ENST00000552000 TRGC2P03986 189 aa2.43□□□□□ -2.02
HOXB3-213ENST00000552000 Q5VV11 94 aa2.43□□□□□ -2.02
HOXB3-213ENST00000552000 DEFB116Q30KQ4 102 aa2.42□□□□□ -2.02
HOXB3-213ENST00000552000 LINC01545Q5VT33 79 aa2.42□□□□□ -2.02
HOXB3-213ENST00000552000 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
HOXB3-213ENST00000552000 K7ERS5 55 aa2.41□□□□□ -2.02
HOXB3-213ENST00000552000 S100A1P23297 94 aa2.41□□□□□ -2.02
HOXB3-213ENST00000552000 H3BMG7 143 aa2.4□□□□□ -2.03
HOXB3-213ENST00000552000 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
HOXB3-213ENST00000552000 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
HOXB3-213ENST00000552000 ADM2Q7Z4H4 148 aa2.4□□□□□ -2.03
HOXB3-213ENST00000552000 C12orf57Q99622 126 aa2.4□□□□□ -2.03
HOXB3-213ENST00000552000 FAM236AA0A1B0GUQ0 79 aa2.39□□□□□ -2.03
HOXB3-213ENST00000552000 FAM236BA0A1B0GV22 79 aa2.39□□□□□ -2.03
HOXB3-213ENST00000552000 A0A1B0GX51 115 aa2.39□□□□□ -2.03
HOXB3-213ENST00000552000 J3KT08 172 aa2.39□□□□□ -2.03
HOXB3-213ENST00000552000 SVBPQ8N300 66 aa2.39□□□□□ -2.03
HOXB3-213ENST00000552000 LINC00472Q9H8W2 130 aa2.39□□□□□ -2.03
HOXB3-213ENST00000552000 A0A1B0GW54 56 aa2.38□□□□□ -2.03
HOXB3-213ENST00000552000 C3orf79P0CE67 100 aa2.38□□□□□ -2.03
HOXB3-213ENST00000552000 RPS28P62857 69 aaKnown RBP2.38□□□□□ -2.03
HOXB3-213ENST00000552000 NDUFA5Q16718 116 aa2.38□□□□□ -2.03
HOXB3-213ENST00000552000 BVES-AS1Q5T3Y7 98 aa2.38□□□□□ -2.03
HOXB3-213ENST00000552000 Q5W150 140 aa2.38□□□□□ -2.03
HOXB3-213ENST00000552000 SPANXA2-OT1Q8N9U9 137 aa2.38□□□□□ -2.03
HOXB3-213ENST00000552000 IMUPQ9GZP8 106 aa2.38□□□□□ -2.03
HOXB3-213ENST00000552000 FABP2P12104 132 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 SPRR2DP22532 72 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST1H2BOP23527 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST1H2BBP33778 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST1H2BDP58876 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST1H2BCP62807 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST2H2BEQ16778 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.37□□□□□ -2.03
HOXB3-213ENST00000552000 LYRM7Q5U5X0 104 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST1H2BHQ93079 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST1H2BNQ99877 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 HIST1H2BMQ99879 126 aa2.37□□□□□ -2.03
HOXB3-213ENST00000552000 TRBV7-4A0A0J9YYF1 115 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms