RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LIMD2Q9BT23 127 aa2.49□□□□□ -2.01
SCAF11-214ENST00000550893 A0A1W2PNM2 257 aa2.48□□□□□ -2.01
SCAF11-214ENST00000550893 K7ERJ3 54 aa2.48□□□□□ -2.01
SCAF11-214ENST00000550893 TAL2Q16559 108 aa2.48□□□□□ -2.01
SCAF11-214ENST00000550893 SLC25A34Q6PIV7 304 aa2.48□□□□□ -2.01
SCAF11-214ENST00000550893 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.48□□□□□ -2.01
SCAF11-214ENST00000550893 CLEC2BQ92478 149 aa2.48□□□□□ -2.01
SCAF11-214ENST00000550893 CBY1Q9Y3M2 126 aa2.48□□□□□ -2.01
SCAF11-214ENST00000550893 A0A0U1RQV1 116 aa2.47□□□□□ -2.01
SCAF11-214ENST00000550893 hADV29S1A0JD25 119 aa2.47□□□□□ -2.01
SCAF11-214ENST00000550893 S100A2P29034 98 aa2.47□□□□□ -2.01
SCAF11-214ENST00000550893 AKR1D1P51857 326 aa2.47□□□□□ -2.01
SCAF11-214ENST00000550893 OCIAD2Q56VL3 154 aa2.47□□□□□ -2.01
SCAF11-214ENST00000550893 Q6Q795 121 aa2.47□□□□□ -2.01
SCAF11-214ENST00000550893 HINT1P49773 126 aaPredicted RBP2.46□□□□□ -2.02
SCAF11-214ENST00000550893 HIST1H4GQ99525 98 aa2.46□□□□□ -2.02
SCAF11-214ENST00000550893 NHP2Q9NX24 153 aaKnown RBP2.46□□□□□ -2.02
SCAF11-214ENST00000550893 A8MUU9 505 aa2.45□□□□□ -2.02
SCAF11-214ENST00000550893 S100A6P06703 90 aa2.45□□□□□ -2.02
SCAF11-214ENST00000550893 Q6JHZ5 121 aa2.45□□□□□ -2.02
SCAF11-214ENST00000550893 PPDPFLQ8WWR9 84 aa2.45□□□□□ -2.02
SCAF11-214ENST00000550893 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
SCAF11-214ENST00000550893 C20orf166-AS1Q96NR2 134 aa2.45□□□□□ -2.02
SCAF11-214ENST00000550893 VAMP8Q9BV40 100 aa2.45□□□□□ -2.02
SCAF11-214ENST00000550893 FCGBPQ9Y6R7 5405 aaPredicted RBP2.44□□□□□ -2.02
SCAF11-214ENST00000550893 OBSCN-AS1Q96MR7 158 aa2.44□□□□□ -2.02
SCAF11-214ENST00000550893 CRCT1Q9UGL9 99 aa2.44□□□□□ -2.02
SCAF11-214ENST00000550893 HSBP1L1C9JCN9 74 aa2.43□□□□□ -2.02
SCAF11-214ENST00000550893 BVES-AS1Q5T3Y7 98 aa2.43□□□□□ -2.02
SCAF11-214ENST00000550893 LINC00472Q9H8W2 130 aa2.43□□□□□ -2.02
SCAF11-214ENST00000550893 A0A087WSZ3 146 aa2.42□□□□□ -2.02
SCAF11-214ENST00000550893 HRES1P13985 223 aa2.42□□□□□ -2.02
SCAF11-214ENST00000550893 HSD52Q0P140 79 aa2.42□□□□□ -2.02
SCAF11-214ENST00000550893 PRO1854Q9UHT4 67 aa2.42□□□□□ -2.02
SCAF11-214ENST00000550893 TRBV7-4A0A0J9YYF1 115 aa2.41□□□□□ -2.02
SCAF11-214ENST00000550893 A0A1B0GX51 115 aa2.41□□□□□ -2.02
SCAF11-214ENST00000550893 MT2AP02795 61 aa2.41□□□□□ -2.02
SCAF11-214ENST00000550893 MT1FP04733 61 aa2.41□□□□□ -2.02
SCAF11-214ENST00000550893 KRTAP10-10P60014 251 aa2.41□□□□□ -2.02
SCAF11-214ENST00000550893 A0A1B0GV72 72 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 F8WEM9 126 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 H0YGX0 51 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 LST1O00453 97 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 TCL1BO95988 128 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 VAMP3Q15836 100 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 TEN1Q86WV5 123 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
SCAF11-214ENST00000550893 H3BMG7 143 aa2.39□□□□□ -2.03
SCAF11-214ENST00000550893 DEFB116Q30KQ4 102 aa2.38□□□□□ -2.03
SCAF11-214ENST00000550893 NAA38Q9BRA0 125 aaKnown RBP2.38□□□□□ -2.03
SCAF11-214ENST00000550893 TRACP01848 142 aa2.37□□□□□ -2.03
SCAF11-214ENST00000550893 SNHG12Q9BXW3 62 aa2.37□□□□□ -2.03
SCAF11-214ENST00000550893 UQCR10Q9UDW1 63 aa2.37□□□□□ -2.03
SCAF11-214ENST00000550893 LOC105371267A0A1B0GV96 52 aa2.36□□□□□ -2.03
SCAF11-214ENST00000550893 ORMDL1Q9P0S3 153 aa2.36□□□□□ -2.03
SCAF11-214ENST00000550893 SS18L2Q9UHA2 77 aa2.36□□□□□ -2.03
SCAF11-214ENST00000550893 FABP2P12104 132 aa2.35□□□□□ -2.03
SCAF11-214ENST00000550893 Q6ZQT0 140 aa2.35□□□□□ -2.03
SCAF11-214ENST00000550893 SIGMAR1Q99720 223 aa2.35□□□□□ -2.03
SCAF11-214ENST00000550893 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
SCAF11-214ENST00000550893 A0A1B0GVX0 72 aa2.34□□□□□ -2.03
SCAF11-214ENST00000550893 CCKP06307 115 aa2.34□□□□□ -2.03
SCAF11-214ENST00000550893 IGKV4-1P06312 121 aa2.34□□□□□ -2.03
SCAF11-214ENST00000550893 IGKV3D-7A0A0C4DH55 119 aa2.33□□□□□ -2.04
SCAF11-214ENST00000550893 SMIM6P0DI80 62 aa2.33□□□□□ -2.04
SCAF11-214ENST00000550893 ANKRD29Q8N6D5 301 aa2.33□□□□□ -2.04
SCAF11-214ENST00000550893 LOC110117498A0A087WWA1 95 aa2.32□□□□□ -2.04
SCAF11-214ENST00000550893 MMP24-AS1A0A0U1RRL7 71 aa2.32□□□□□ -2.04
SCAF11-214ENST00000550893 TMEM256-PLSCR3K7ERE1 68 aa2.32□□□□□ -2.04
SCAF11-214ENST00000550893 TAX1BP3O14907 124 aa2.32□□□□□ -2.04
SCAF11-214ENST00000550893 LINC00313P59037 77 aa2.32□□□□□ -2.04
SCAF11-214ENST00000550893 COX6B2Q6YFQ2 88 aa2.32□□□□□ -2.04
SCAF11-214ENST00000550893 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
SCAF11-214ENST00000550893 IGHV6-1A0A0B4J1U7 121 aa2.31□□□□□ -2.04
SCAF11-214ENST00000550893 BAALC-AS2P0C853 105 aa2.31□□□□□ -2.04
SCAF11-214ENST00000550893 PSMB2P49721 201 aa2.31□□□□□ -2.04
SCAF11-214ENST00000550893 MTURNQ8N3F0 131 aa2.31□□□□□ -2.04
SCAF11-214ENST00000550893 C14orf132Q9NPU4 83 aa2.31□□□□□ -2.04
SCAF11-214ENST00000550893 M0R2T5 61 aa2.3□□□□□ -2.04
SCAF11-214ENST00000550893 DNAL4O96015 105 aa2.3□□□□□ -2.04
SCAF11-214ENST00000550893 ZCCHC13Q8WW36 166 aaKnown RBP2.3□□□□□ -2.04
SCAF11-214ENST00000550893 C8orf17Q9NRJ1 99 aa2.3□□□□□ -2.04
SCAF11-214ENST00000550893 A8MWP4 228 aa2.29□□□□□ -2.04
SCAF11-214ENST00000550893 RBM3P98179 157 aaKnown RBP2.29□□□□□ -2.04
SCAF11-214ENST00000550893 C8orf87E5RJ46 101 aa2.28□□□□□ -2.04
SCAF11-214ENST00000550893 H3BQ85 93 aa2.28□□□□□ -2.04
SCAF11-214ENST00000550893 K7EQZ3 153 aa2.28□□□□□ -2.04
SCAF11-214ENST00000550893 Q5W150 140 aa2.28□□□□□ -2.04
SCAF11-214ENST00000550893 VPS25Q9BRG1 176 aa2.28□□□□□ -2.04
SCAF11-214ENST00000550893 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
SCAF11-214ENST00000550893 A0A1W2PPM0 123 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 C9JAW5 83 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 M0R143 59 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 COX6CP09669 75 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 SPINK7P58062 85 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 ATXN8Q156A1 80 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 PRR15Q8IV56 129 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SCAF11-214ENST00000550893 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms