RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 LINC00158P58513 81 aa-0.72□□□□□ -2.52
NPAS3-208ENST00000550662 PKIAP61925 76 aa-0.72□□□□□ -2.52
NPAS3-208ENST00000550662 WFDC9Q8NEX5 89 aa-0.72□□□□□ -2.52
NPAS3-208ENST00000550662 MYMXA0A1B0GTQ4 84 aa-0.73□□□□□ -2.53
NPAS3-208ENST00000550662 NDUFB1O75438 58 aa-0.73□□□□□ -2.53
NPAS3-208ENST00000550662 S4R3F8 94 aa-0.73□□□□□ -2.53
NPAS3-208ENST00000550662 PLIN4Q96Q06 1357 aa-0.73□□□□□ -2.53
NPAS3-208ENST00000550662 NCOA2Q15596 1464 aa-0.73□□□□□ -2.53
NPAS3-208ENST00000550662 WDFY4Q6ZS81 3184 aa-0.73□□□□□ -2.53
NPAS3-208ENST00000550662 SZT2Q5T011 3432 aa-0.74□□□□□ -2.53
NPAS3-208ENST00000550662 PLCH1Q4KWH8 1693 aa-0.74□□□□□ -2.53
NPAS3-208ENST00000550662 LYNX1G3V0Z9 82 aa-0.74□□□□□ -2.53
NPAS3-208ENST00000550662 MT1HP80294 61 aa-0.74□□□□□ -2.53
NPAS3-208ENST00000550662 PIK3C2BO00750 1634 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 MAP3K4Q9Y6R4 1608 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 VPS13CQ709C8 3753 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 DDX60LQ5H9U9 1706 aaKnown RBP-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 CEP350Q5VT06 3117 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 RABAC1Q9UI14 185 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 CCDC88BA6NC98 1476 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 ABCC3O15438 1527 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 URB2Q14146 1524 aaKnown RBP-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 KIF14Q15058 1648 aa-0.75□□□□□ -2.53
NPAS3-208ENST00000550662 DEFB110Q30KQ9 67 aa-0.76□□□□□ -2.53
NPAS3-208ENST00000550662 KRTAP19-5Q3LI72 72 aa-0.76□□□□□ -2.53
NPAS3-208ENST00000550662 MT1MQ8N339 61 aa-0.76□□□□□ -2.53
NPAS3-208ENST00000550662 FRYLO94915 3013 aa-0.76□□□□□ -2.53
NPAS3-208ENST00000550662 DNAH14Q0VDD8 3507 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 TJP1Q07157 1748 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 ITSN1Q15811 1721 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 TTC37Q6PGP7 1564 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 CCNB3Q8WWL7 1395 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 CEBPZOSA8MTT3 80 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 K7EP34 96 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 IFI6P09912 130 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 SNRPFP62306 86 aaKnown RBP-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 MT1XP80297 61 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 DEFA5Q01523 94 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 PYY3Q5JQD4 70 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 LINC00643Q86TS7 51 aa-0.77□□□□□ -2.53
NPAS3-208ENST00000550662 ZC3H13Q5T200 1668 aaKnown RBP-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 CFAP43Q8NDM7 1665 aa-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 MT2AP02795 61 aa-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 DEFB130BP0DP73 79 aa-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 DEFB130AP0DP74 79 aa-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 IAPPP10997 89 aa-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 ANKRD36CQ5JPF3 1778 aa-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 RICTORQ6R327 1708 aa-0.78□□□□□ -2.53
NPAS3-208ENST00000550662 RNF17Q9BXT8 1623 aaKnown RBP-0.78□□□□□ -2.54
NPAS3-208ENST00000550662 THOC2Q8NI27 1593 aaKnown RBP-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 MUC3AQ02505 3323 aa-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 UMAD1C9J7I0 102 aa-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 ACYP1P07311 99 aa-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 IFI27P40305 119 aaPredicted RBP-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 DEFB106AQ8N104 65 aa-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 SPTAN1Q13813 2472 aaKnown RBP-0.79□□□□□ -2.54
NPAS3-208ENST00000550662 DNAH12Q6ZR08 3092 aa-0.8□□□□□ -2.54
NPAS3-208ENST00000550662 ITSN2Q9NZM3 1697 aa-0.8□□□□□ -2.54
NPAS3-208ENST00000550662 MT1FP04733 61 aa-0.8□□□□□ -2.54
NPAS3-208ENST00000550662 DEFB1P60022 68 aa-0.8□□□□□ -2.54
NPAS3-208ENST00000550662 S100A16Q96FQ6 103 aaKnown RBP-0.8□□□□□ -2.54
NPAS3-208ENST00000550662 PCNTO95613 3336 aa-0.8□□□□□ -2.54
NPAS3-208ENST00000550662 MKI67P46013 3256 aaKnown RBP-0.81□□□□□ -2.54
NPAS3-208ENST00000550662 USP34Q70CQ2 3546 aa-0.81□□□□□ -2.54
NPAS3-208ENST00000550662 NDUFA4O00483 81 aa-0.81□□□□□ -2.54
NPAS3-208ENST00000550662 MT1GP13640 62 aa-0.81□□□□□ -2.54
NPAS3-208ENST00000550662 HMGA1P17096 107 aaKnown RBP-0.81□□□□□ -2.54
NPAS3-208ENST00000550662 TDRG1Q3Y452 100 aa-0.81□□□□□ -2.54
NPAS3-208ENST00000550662 KRTAP8-1Q8IUC2 63 aa-0.81□□□□□ -2.54
NPAS3-208ENST00000550662 DEFB131BA0A096LNP1 70 aa-0.82□□□□□ -2.54
NPAS3-208ENST00000550662 PVALEFA0A1B0GWK0 134 aa-0.82□□□□□ -2.54
NPAS3-208ENST00000550662 ATP5EP2Q5VTU8 51 aa-0.82□□□□□ -2.54
NPAS3-208ENST00000550662 PARP4Q9UKK3 1724 aaKnown RBP-0.82□□□□□ -2.54
NPAS3-208ENST00000550662 WDFY3Q8IZQ1 3526 aa-0.82□□□□□ -2.54
NPAS3-208ENST00000550662 Q9H521 79 aa-0.83□□□□□ -2.54
NPAS3-208ENST00000550662 V9GYS6 101 aa-0.83□□□□□ -2.54
NPAS3-208ENST00000550662 CFAP47Q6ZTR5 3102 aa-0.83□□□□□ -2.54
NPAS3-208ENST00000550662 TOGARAM1Q9Y4F4 1720 aa-0.84□□□□□ -2.54
NPAS3-208ENST00000550662 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.84□□□□□ -2.54
NPAS3-208ENST00000550662 MRPL33O75394 65 aaKnown RBP-0.84□□□□□ -2.54
NPAS3-208ENST00000550662 NREPQ16612 68 aa-0.84□□□□□ -2.54
NPAS3-208ENST00000550662 CD163L1Q9NR16 1453 aa-0.85□□□□□ -2.55
NPAS3-208ENST00000550662 KANTRA0A1W2PQU2 76 aa-0.85□□□□□ -2.55
NPAS3-208ENST00000550662 SMR3BP02814 79 aaPredicted RBP-0.85□□□□□ -2.55
NPAS3-208ENST00000550662 DEFB121Q5J5C9 76 aa-0.85□□□□□ -2.55
NPAS3-208ENST00000550662 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.85□□□□□ -2.55
NPAS3-208ENST00000550662 NHSQ6T4R5 1651 aa-0.85□□□□□ -2.55
NPAS3-208ENST00000550662 KIAA0586Q9BVV6 1533 aa-0.85□□□□□ -2.55
NPAS3-208ENST00000550662 NRAPQ86VF7 1730 aa-0.86□□□□□ -2.55
NPAS3-208ENST00000550662 HFM1A2PYH4 1435 aa-0.86□□□□□ -2.55
NPAS3-208ENST00000550662 MT1EP04732 61 aa-0.86□□□□□ -2.55
NPAS3-208ENST00000550662 KIF1AQ12756 1690 aa-0.86□□□□□ -2.55
NPAS3-208ENST00000550662 KDM5DQ9BY66 1539 aa-0.86□□□□□ -2.55
NPAS3-208ENST00000550662 INO80Q9ULG1 1556 aaPredicted RBP-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 UACAQ9BZF9 1416 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 MMP24-AS1A0A0U1RRL7 71 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 TNP1P09430 55 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 WT1-ASQ06250 92 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 CLPSL2Q6UWE3 100 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms