RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 IGFL1Q6UW32 110 aa3.63□□□□□ -1.83
DEPDC4-209ENST00000550587 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
DEPDC4-209ENST00000550587 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 IGLV9-49A0A0B4J1Y8 123 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A1W2PNM2 257 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 CRYGAP11844 174 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 Q6Q795 121 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 Q8NBF4 154 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A087X002 238 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 C9orf153Q5TBE3 101 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 VPS25Q9BRG1 176 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 CD164Q04900 197 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 MOBPQ13875 183 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 PRR4Q16378 134 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 LINC00846Q9NV44 126 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
DEPDC4-209ENST00000550587 LRP2P98164 4655 aa3.58□□□□□ -1.84
DEPDC4-209ENST00000550587 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
DEPDC4-209ENST00000550587 TYMSOSQ8TAI1 123 aa3.57□□□□□ -1.84
DEPDC4-209ENST00000550587 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
DEPDC4-209ENST00000550587 NREPQ16612 68 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 LINC00643Q86TS7 51 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 A0A087WSZ3 146 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 SPAG11AQ6PDA7 123 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 Q6ZVQ6 151 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 MPLKIPQ8TAP9 179 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 SPINK1P00995 79 aa3.54□□□□□ -1.84
DEPDC4-209ENST00000550587 Q5XG85 94 aa3.54□□□□□ -1.84
DEPDC4-209ENST00000550587 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
DEPDC4-209ENST00000550587 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 ATP5EP2Q5VTU8 51 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 SIGMAR1Q99720 223 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 MT-ATP8P03928 68 aa3.52□□□□□ -1.85
DEPDC4-209ENST00000550587 CXCL6P80162 114 aa3.52□□□□□ -1.85
DEPDC4-209ENST00000550587 TNXBP22105 4242 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 J3KT08 172 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 BPY2O14599 106 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 Q96NJ1 140 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 LIMD2Q9BT23 127 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 IGKV3D-7A0A0C4DH55 119 aa3.5□□□□□ -1.85
DEPDC4-209ENST00000550587 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
DEPDC4-209ENST00000550587 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
DEPDC4-209ENST00000550587 MT3P25713 68 aa3.49□□□□□ -1.85
DEPDC4-209ENST00000550587 DSCR10P59022 87 aa3.49□□□□□ -1.85
DEPDC4-209ENST00000550587 DEFB116Q30KQ4 102 aa3.49□□□□□ -1.85
DEPDC4-209ENST00000550587 IGKV4-1P06312 121 aa3.48□□□□□ -1.85
DEPDC4-209ENST00000550587 C1orf195Q5TG92 126 aa3.48□□□□□ -1.85
DEPDC4-209ENST00000550587 A8MWP4 228 aa3.47□□□□□ -1.85
DEPDC4-209ENST00000550587 NDUFB1O75438 58 aa3.47□□□□□ -1.85
DEPDC4-209ENST00000550587 HIST1H4AP62805 103 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-209ENST00000550587 PRR15Q8IV56 129 aa3.46□□□□□ -1.86
DEPDC4-209ENST00000550587 Q8N9L7 120 aa3.45□□□□□ -1.86
DEPDC4-209ENST00000550587 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
DEPDC4-209ENST00000550587 IGLV7-46A0A075B6I9 117 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 K7EQZ3 153 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 SCGB1A1P11684 91 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 A0A087WVE0 104 aa3.43□□□□□ -1.86
DEPDC4-209ENST00000550587 LPAP08519 4548 aa3.42□□□□□ -1.86
DEPDC4-209ENST00000550587 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
DEPDC4-209ENST00000550587 HCG22E2RYF7 251 aa3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 C8orf87E5RJ46 101 aa3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 FP248Q71RG6 208 aaPredicted RBP3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 C8orf17Q9NRJ1 99 aa3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 MMP24-AS1A0A0U1RRL7 71 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 FAM236AA0A1B0GUQ0 79 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 FAM236BA0A1B0GV22 79 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 LINC00313P59037 77 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 CASC2Q6XLA1 102 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 hDV103S1A0JD37 113 aa3.39□□□□□ -1.87
DEPDC4-209ENST00000550587 PCP4P48539 62 aa3.39□□□□□ -1.87
DEPDC4-209ENST00000550587 TMEM254Q8TBM7 123 aa3.39□□□□□ -1.87
DEPDC4-209ENST00000550587 ATOX1O00244 68 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 SEC61BP60468 96 aaKnown RBP3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 SMIM20Q8N5G0 67 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 MRPL34Q9BQ48 92 aaKnown RBP3.37□□□□□ -1.87
DEPDC4-209ENST00000550587 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
DEPDC4-209ENST00000550587 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
DEPDC4-209ENST00000550587 TRAV7A0A075B6U4 112 aa3.35□□□□□ -1.87
DEPDC4-209ENST00000550587 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
DEPDC4-209ENST00000550587 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
DEPDC4-209ENST00000550587 C9orf92A6NGG3 77 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms