RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 A0A0B4J2C4 111 aa3.84□□□□□ -1.79
NEK3-201ENST00000550331 A0A1B0GX51 115 aa3.84□□□□□ -1.79
NEK3-201ENST00000550331 H3BMG7 143 aa3.84□□□□□ -1.79
NEK3-201ENST00000550331 RAB37Q96AX2 223 aa3.84□□□□□ -1.79
NEK3-201ENST00000550331 FAM218AQ96MZ4 157 aa3.84□□□□□ -1.79
NEK3-201ENST00000550331 DSCR10P59022 87 aa3.83□□□□□ -1.8
NEK3-201ENST00000550331 SIGMAR1Q99720 223 aa3.83□□□□□ -1.8
NEK3-201ENST00000550331 A0A1W2PNM2 257 aa3.82□□□□□ -1.8
NEK3-201ENST00000550331 MT2AP02795 61 aa3.82□□□□□ -1.8
NEK3-201ENST00000550331 S100A6P06703 90 aa3.82□□□□□ -1.8
NEK3-201ENST00000550331 HIGD1BQ9P298 99 aa3.82□□□□□ -1.8
NEK3-201ENST00000550331 TRBV7-4A0A0J9YYF1 115 aa3.81□□□□□ -1.8
NEK3-201ENST00000550331 FAM236DA0A1B0GTK5 79 aa3.81□□□□□ -1.8
NEK3-201ENST00000550331 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
NEK3-201ENST00000550331 FAM236CP0DP71 79 aa3.81□□□□□ -1.8
NEK3-201ENST00000550331 FABP2P12104 132 aa3.81□□□□□ -1.8
NEK3-201ENST00000550331 LINC00313P59037 77 aa3.81□□□□□ -1.8
NEK3-201ENST00000550331 IGKV4-1P06312 121 aa3.8□□□□□ -1.8
NEK3-201ENST00000550331 SEC61GP60059 68 aa3.8□□□□□ -1.8
NEK3-201ENST00000550331 MPLKIPQ8TAP9 179 aa3.8□□□□□ -1.8
NEK3-201ENST00000550331 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
NEK3-201ENST00000550331 MT1FP04733 61 aa3.79□□□□□ -1.8
NEK3-201ENST00000550331 HRES1P13985 223 aa3.79□□□□□ -1.8
NEK3-201ENST00000550331 C14orf144Q96I85 54 aa3.79□□□□□ -1.8
NEK3-201ENST00000550331 PRO1854Q9UHT4 67 aa3.79□□□□□ -1.8
NEK3-201ENST00000550331 H3BQ85 93 aa3.78□□□□□ -1.8
NEK3-201ENST00000550331 C2orf91Q6ZV80 131 aa3.78□□□□□ -1.8
NEK3-201ENST00000550331 CEND1Q8N111 149 aa3.78□□□□□ -1.8
NEK3-201ENST00000550331 ANKRD29Q8N6D5 301 aa3.78□□□□□ -1.8
NEK3-201ENST00000550331 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
NEK3-201ENST00000550331 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
NEK3-201ENST00000550331 DNAL4O96015 105 aa3.77□□□□□ -1.81
NEK3-201ENST00000550331 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
NEK3-201ENST00000550331 LINC00472Q9H8W2 130 aa3.77□□□□□ -1.81
NEK3-201ENST00000550331 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
NEK3-201ENST00000550331 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
NEK3-201ENST00000550331 SPATA45Q537H7 98 aa3.76□□□□□ -1.81
NEK3-201ENST00000550331 IGHV6-1A0A0B4J1U7 121 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 TMEM256-PLSCR3K7ERE1 68 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 TRACP01848 142 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 CCKP06307 115 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 S100A1P23297 94 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 FXYD2P54710 66 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 MTURNQ8N3F0 131 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 VAMP8Q9BV40 100 aa3.75□□□□□ -1.81
NEK3-201ENST00000550331 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
NEK3-201ENST00000550331 C8orf87E5RJ46 101 aa3.74□□□□□ -1.81
NEK3-201ENST00000550331 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
NEK3-201ENST00000550331 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
NEK3-201ENST00000550331 NEBP20929 6669 aa3.73□□□□□ -1.81
NEK3-201ENST00000550331 A0A1B0GV72 72 aa3.73□□□□□ -1.81
NEK3-201ENST00000550331 A0A1B0GVX0 72 aa3.73□□□□□ -1.81
NEK3-201ENST00000550331 COX6CP09669 75 aa3.73□□□□□ -1.81
NEK3-201ENST00000550331 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
NEK3-201ENST00000550331 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
NEK3-201ENST00000550331 PSMB2P49721 201 aa3.72□□□□□ -1.81
NEK3-201ENST00000550331 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
NEK3-201ENST00000550331 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
NEK3-201ENST00000550331 J3KT08 172 aa3.71□□□□□ -1.82
NEK3-201ENST00000550331 SPINK7P58062 85 aa3.71□□□□□ -1.82
NEK3-201ENST00000550331 ZCCHC13Q8WW36 166 aaKnown RBP3.71□□□□□ -1.82
NEK3-201ENST00000550331 HSD52Q0P140 79 aa3.7□□□□□ -1.82
NEK3-201ENST00000550331 K7ERJ3 54 aa3.69□□□□□ -1.82
NEK3-201ENST00000550331 RBM3P98179 157 aaKnown RBP3.69□□□□□ -1.82
NEK3-201ENST00000550331 DSCR8Q96T75 97 aa3.69□□□□□ -1.82
NEK3-201ENST00000550331 VPS25Q9BRG1 176 aa3.69□□□□□ -1.82
NEK3-201ENST00000550331 A8MWP4 228 aa3.68□□□□□ -1.82
NEK3-201ENST00000550331 IGKV2-30P06310 120 aa3.68□□□□□ -1.82
NEK3-201ENST00000550331 NDUFB1O75438 58 aa3.67□□□□□ -1.82
NEK3-201ENST00000550331 C9JAW5 83 aa3.66□□□□□ -1.82
NEK3-201ENST00000550331 Q6ZQT0 140 aa3.66□□□□□ -1.82
NEK3-201ENST00000550331 Q6ZVQ6 151 aa3.66□□□□□ -1.82
NEK3-201ENST00000550331 WFDC13Q8IUB5 93 aa3.66□□□□□ -1.82
NEK3-201ENST00000550331 A0A1B0GW54 56 aa3.64□□□□□ -1.83
NEK3-201ENST00000550331 SCGB1C2P0DMR2 95 aa3.64□□□□□ -1.83
NEK3-201ENST00000550331 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
NEK3-201ENST00000550331 C8orf17Q9NRJ1 99 aa3.64□□□□□ -1.83
NEK3-201ENST00000550331 BAALC-AS2P0C853 105 aa3.63□□□□□ -1.83
NEK3-201ENST00000550331 PYY3Q5JQD4 70 aa3.63□□□□□ -1.83
NEK3-201ENST00000550331 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
NEK3-201ENST00000550331 UQCR10Q9UDW1 63 aa3.62□□□□□ -1.83
NEK3-201ENST00000550331 LOC110117498A0A087WWA1 95 aa3.61□□□□□ -1.83
NEK3-201ENST00000550331 IGKV3D-7A0A0C4DH55 119 aa3.61□□□□□ -1.83
NEK3-201ENST00000550331 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
NEK3-201ENST00000550331 PDE6GP18545 87 aa3.6□□□□□ -1.83
NEK3-201ENST00000550331 H1FX-AS1Q4G0G2 97 aa3.59□□□□□ -1.83
NEK3-201ENST00000550331 PRR15Q8IV56 129 aa3.59□□□□□ -1.83
NEK3-201ENST00000550331 ATXN8Q156A1 80 aa3.58□□□□□ -1.84
NEK3-201ENST00000550331 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
NEK3-201ENST00000550331 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
NEK3-201ENST00000550331 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
NEK3-201ENST00000550331 TMEM254Q8TBM7 123 aa3.57□□□□□ -1.84
NEK3-201ENST00000550331 NREPQ16612 68 aa3.55□□□□□ -1.84
NEK3-201ENST00000550331 C14orf132Q9NPU4 83 aa3.55□□□□□ -1.84
NEK3-201ENST00000550331 hDV103S1A0JD37 113 aa3.54□□□□□ -1.84
NEK3-201ENST00000550331 M0R143 59 aa3.53□□□□□ -1.84
NEK3-201ENST00000550331 NDUFS5O43920 106 aa3.53□□□□□ -1.84
NEK3-201ENST00000550331 C7orf65Q6ZTY9 151 aa3.53□□□□□ -1.84
NEK3-201ENST00000550331 K7EQZ3 153 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms