RNA–Protein interactions for RNA: ENST00000549547.1

PRPF40B-210, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-210ENST00000549547 A0A087WSZ3 146 aa7.1□□□□□ -1.27
PRPF40B-210ENST00000549547 TRBV7-4A0A0J9YYF1 115 aa7.1□□□□□ -1.27
PRPF40B-210ENST00000549547 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.27
PRPF40B-210ENST00000549547 A0A1W2PNM2 257 aa7.08□□□□□ -1.28
PRPF40B-210ENST00000549547 LINC00643Q86TS7 51 aa7.08□□□□□ -1.28
PRPF40B-210ENST00000549547 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
PRPF40B-210ENST00000549547 ATOX1O00244 68 aa7.07□□□□□ -1.28
PRPF40B-210ENST00000549547 CCKP06307 115 aa7.07□□□□□ -1.28
PRPF40B-210ENST00000549547 Q6ZQT0 140 aa7.07□□□□□ -1.28
PRPF40B-210ENST00000549547 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
PRPF40B-210ENST00000549547 TMEM258P61165 79 aa7.06□□□□□ -1.28
PRPF40B-210ENST00000549547 COX7CP15954 63 aa7.04□□□□□ -1.28
PRPF40B-210ENST00000549547 PDE6GP18545 87 aa7.04□□□□□ -1.28
PRPF40B-210ENST00000549547 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-210ENST00000549547 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
PRPF40B-210ENST00000549547 FAM236AA0A1B0GUQ0 79 aa7.01□□□□□ -1.29
PRPF40B-210ENST00000549547 FAM236BA0A1B0GV22 79 aa7.01□□□□□ -1.29
PRPF40B-210ENST00000549547 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
PRPF40B-210ENST00000549547 Q96NJ1 140 aa7.01□□□□□ -1.29
PRPF40B-210ENST00000549547 IGKV4-1P06312 121 aa6.98□□□□□ -1.29
PRPF40B-210ENST00000549547 A0A1B0GW54 56 aa6.97□□□□□ -1.29
PRPF40B-210ENST00000549547 Q75L30 129 aa6.96□□□□□ -1.3
PRPF40B-210ENST00000549547 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
PRPF40B-210ENST00000549547 LINC00472Q9H8W2 130 aa6.96□□□□□ -1.3
PRPF40B-210ENST00000549547 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-210ENST00000549547 ATP11AUNQ6ZP68 121 aa6.93□□□□□ -1.3
PRPF40B-210ENST00000549547 LINC00846Q9NV44 126 aa6.93□□□□□ -1.3
PRPF40B-210ENST00000549547 LINC00313P59037 77 aa6.92□□□□□ -1.3
PRPF40B-210ENST00000549547 SERP2Q8N6R1 65 aa6.92□□□□□ -1.3
PRPF40B-210ENST00000549547 DSCR10P59022 87 aa6.91□□□□□ -1.3
PRPF40B-210ENST00000549547 DEFB116Q30KQ4 102 aa6.91□□□□□ -1.3
PRPF40B-210ENST00000549547 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
PRPF40B-210ENST00000549547 A8MUU9 505 aa6.89□□□□□ -1.31
PRPF40B-210ENST00000549547 ATP5EP2Q5VTU8 51 aa6.89□□□□□ -1.31
PRPF40B-210ENST00000549547 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
PRPF40B-210ENST00000549547 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
PRPF40B-210ENST00000549547 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
PRPF40B-210ENST00000549547 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
PRPF40B-210ENST00000549547 Q6ZVQ6 151 aa6.87□□□□□ -1.31
PRPF40B-210ENST00000549547 PRO0628Q9UI54 55 aa6.87□□□□□ -1.31
PRPF40B-210ENST00000549547 NDUFB1O75438 58 aa6.86□□□□□ -1.31
PRPF40B-210ENST00000549547 NREPQ16612 68 aa6.85□□□□□ -1.31
PRPF40B-210ENST00000549547 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
PRPF40B-210ENST00000549547 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
PRPF40B-210ENST00000549547 KRTAP16-1A8MUX0 517 aa6.83□□□□□ -1.32
PRPF40B-210ENST00000549547 SERP1Q9Y6X1 66 aa6.83□□□□□ -1.32
PRPF40B-210ENST00000549547 A8MWP4 228 aa6.81□□□□□ -1.32
PRPF40B-210ENST00000549547 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
PRPF40B-210ENST00000549547 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
PRPF40B-210ENST00000549547 FAM236DA0A1B0GTK5 79 aa6.78□□□□□ -1.32
PRPF40B-210ENST00000549547 NDUFC1O43677 76 aa6.78□□□□□ -1.32
PRPF40B-210ENST00000549547 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
PRPF40B-210ENST00000549547 COX6B2Q6YFQ2 88 aa6.78□□□□□ -1.32
PRPF40B-210ENST00000549547 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
PRPF40B-210ENST00000549547 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
PRPF40B-210ENST00000549547 IGKV3D-7A0A0C4DH55 119 aa6.76□□□□□ -1.33
PRPF40B-210ENST00000549547 BPY2O14599 106 aa6.76□□□□□ -1.33
PRPF40B-210ENST00000549547 CXCL6P80162 114 aa6.75□□□□□ -1.33
PRPF40B-210ENST00000549547 C8orf17Q9NRJ1 99 aa6.75□□□□□ -1.33
PRPF40B-210ENST00000549547 PRR15Q8IV56 129 aa6.74□□□□□ -1.33
PRPF40B-210ENST00000549547 C4orf26Q17RF5 130 aa6.73□□□□□ -1.33
PRPF40B-210ENST00000549547 TRAV7A0A075B6U4 112 aa6.72□□□□□ -1.33
PRPF40B-210ENST00000549547 MT1HP80294 61 aa6.71□□□□□ -1.34
PRPF40B-210ENST00000549547 Q8N9L7 120 aa6.71□□□□□ -1.34
PRPF40B-210ENST00000549547 Q8N9P0 234 aaPredicted RBP6.71□□□□□ -1.34
PRPF40B-210ENST00000549547 V9GYY9 64 aa6.71□□□□□ -1.34
PRPF40B-210ENST00000549547 FLGP20930 4061 aaPredicted RBP6.71□□□□□ -1.34
PRPF40B-210ENST00000549547 K7EQZ3 153 aa6.7□□□□□ -1.34
PRPF40B-210ENST00000549547 ZCCHC13Q8WW36 166 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-210ENST00000549547 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
PRPF40B-210ENST00000549547 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
PRPF40B-210ENST00000549547 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
PRPF40B-210ENST00000549547 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-210ENST00000549547 A0A087WVE0 104 aa6.65□□□□□ -1.34
PRPF40B-210ENST00000549547 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
PRPF40B-210ENST00000549547 M0R2T5 61 aa6.65□□□□□ -1.34
PRPF40B-210ENST00000549547 SEC61GP60059 68 aa6.64□□□□□ -1.35
PRPF40B-210ENST00000549547 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
PRPF40B-210ENST00000549547 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
PRPF40B-210ENST00000549547 H7BZZ5 65 aa6.62□□□□□ -1.35
PRPF40B-210ENST00000549547 NDUFS5O43920 106 aa6.61□□□□□ -1.35
PRPF40B-210ENST00000549547 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
PRPF40B-210ENST00000549547 CYSTM1Q9H1C7 97 aa6.61□□□□□ -1.35
PRPF40B-210ENST00000549547 HRES1P13985 223 aa6.6□□□□□ -1.35
PRPF40B-210ENST00000549547 HCG22E2RYF7 251 aa6.59□□□□□ -1.35
PRPF40B-210ENST00000549547 SPINK7P58062 85 aa6.59□□□□□ -1.35
PRPF40B-210ENST00000549547 CASC2Q6XLA1 102 aa6.59□□□□□ -1.35
PRPF40B-210ENST00000549547 MPLKIPQ8TAP9 179 aa6.58□□□□□ -1.36
PRPF40B-210ENST00000549547 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
PRPF40B-210ENST00000549547 KRTAP10-6P60371 365 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-210ENST00000549547 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
PRPF40B-210ENST00000549547 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
PRPF40B-210ENST00000549547 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
PRPF40B-210ENST00000549547 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
PRPF40B-210ENST00000549547 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
PRPF40B-210ENST00000549547 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
PRPF40B-210ENST00000549547 IGKV2D-30A0A075B6S6 120 aa6.46□□□□□ -1.38
PRPF40B-210ENST00000549547 IGKV2-30P06310 120 aa6.46□□□□□ -1.38
PRPF40B-210ENST00000549547 Q5W150 140 aa6.46□□□□□ -1.38
PRPF40B-210ENST00000549547 TP53AIP1Q9HCN2 124 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms