RNA–Protein interactions for RNA: ENST00000549344.5

PPFIA2-215, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2

Gene PPFIA2, Length 383 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-215ENST00000549344 LYSTQ99698 3801 aa-0.3□□□□□ -2.46
PPFIA2-215ENST00000549344 MADDQ8WXG6 1647 aa-0.31□□□□□ -2.46
PPFIA2-215ENST00000549344 EFCAB5A4FU69 1503 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 KIF1AQ12756 1690 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 A0A087WWC5 75 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 MT1AP04731 61 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 SFTA3P0C7M3 94 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 KALRNO60229 2985 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 MROH1Q8NDA8 1641 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 ACACAQ13085 2346 aa-0.32□□□□□ -2.46
PPFIA2-215ENST00000549344 NBEAQ8NFP9 2946 aa-0.33□□□□□ -2.46
PPFIA2-215ENST00000549344 K7EMI3 77 aa-0.33□□□□□ -2.46
PPFIA2-215ENST00000549344 SPRR2FQ96RM1 72 aa-0.33□□□□□ -2.46
PPFIA2-215ENST00000549344 DSTQ03001 7570 aaKnown RBP-0.34□□□□□ -2.46
PPFIA2-215ENST00000549344 MUC12Q9UKN1 5478 aa-0.34□□□□□ -2.46
PPFIA2-215ENST00000549344 MYO18BQ8IUG5 2567 aa-0.34□□□□□ -2.46
PPFIA2-215ENST00000549344 UTP20O75691 2785 aaKnown RBP-0.34□□□□□ -2.46
PPFIA2-215ENST00000549344 TOGARAM1Q9Y4F4 1720 aa-0.35□□□□□ -2.47
PPFIA2-215ENST00000549344 NBEAL2Q6ZNJ1 2754 aa-0.35□□□□□ -2.47
PPFIA2-215ENST00000549344 H3BUA1 57 aa-0.35□□□□□ -2.47
PPFIA2-215ENST00000549344 M0R1W7 72 aa-0.35□□□□□ -2.47
PPFIA2-215ENST00000549344 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
PPFIA2-215ENST00000549344 DEFB110Q30KQ9 67 aa-0.36□□□□□ -2.47
PPFIA2-215ENST00000549344 LAMA1P25391 3075 aa-0.36□□□□□ -2.47
PPFIA2-215ENST00000549344 CUBNO60494 3623 aa-0.37□□□□□ -2.47
PPFIA2-215ENST00000549344 S100ZQ8WXG8 99 aa-0.37□□□□□ -2.47
PPFIA2-215ENST00000549344 NMES1Q9C002 83 aa-0.37□□□□□ -2.47
PPFIA2-215ENST00000549344 CCDC168Q8NDH2 2452 aa-0.37□□□□□ -2.47
PPFIA2-215ENST00000549344 ITPR3Q14573 2671 aa-0.38□□□□□ -2.47
PPFIA2-215ENST00000549344 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
PPFIA2-215ENST00000549344 DNAH9Q9NYC9 4486 aa-0.38□□□□□ -2.47
PPFIA2-215ENST00000549344 IGLV5-48A0A075B6I7 105 aa-0.39□□□□□ -2.47
PPFIA2-215ENST00000549344 SMIM31A0A1B0GVY4 71 aa-0.39□□□□□ -2.47
PPFIA2-215ENST00000549344 SERF2P84101 59 aa-0.39□□□□□ -2.47
PPFIA2-215ENST00000549344 ACACBO00763 2458 aa-0.39□□□□□ -2.47
PPFIA2-215ENST00000549344 MGAM2Q2M2H8 2515 aa-0.39□□□□□ -2.47
PPFIA2-215ENST00000549344 CDC42BPAQ5VT25 1732 aa-0.4□□□□□ -2.47
PPFIA2-215ENST00000549344 CROCC2H7BZ55 1655 aa-0.4□□□□□ -2.47
PPFIA2-215ENST00000549344 LAMA5O15230 3695 aa-0.41□□□□□ -2.47
PPFIA2-215ENST00000549344 CCDC180Q9P1Z9 1646 aa-0.41□□□□□ -2.47
PPFIA2-215ENST00000549344 AKAP9Q99996 3911 aa-0.41□□□□□ -2.47
PPFIA2-215ENST00000549344 RIF1Q5UIP0 2472 aaKnown RBP-0.41□□□□□ -2.48
PPFIA2-215ENST00000549344 LY75O60449 1722 aa-0.41□□□□□ -2.48
PPFIA2-215ENST00000549344 WDR87Q6ZQQ6 2873 aa-0.42□□□□□ -2.48
PPFIA2-215ENST00000549344 CLASP1Q7Z460 1538 aa-0.42□□□□□ -2.48
PPFIA2-215ENST00000549344 NOP10Q9NPE3 64 aaKnown RBP-0.42□□□□□ -2.48
PPFIA2-215ENST00000549344 USP9YO00507 2555 aaPredicted RBP-0.42□□□□□ -2.48
PPFIA2-215ENST00000549344 NBPF19A0A087WUL8 3843 aa-0.42□□□□□ -2.48
PPFIA2-215ENST00000549344 FAT3Q8TDW7 4589 aa-0.42□□□□□ -2.48
PPFIA2-215ENST00000549344 SMIM5Q71RC9 77 aa-0.43□□□□□ -2.48
PPFIA2-215ENST00000549344 DNAH6Q9C0G6 4158 aa-0.43□□□□□ -2.48
PPFIA2-215ENST00000549344 ABCA6Q8N139 1617 aa-0.43□□□□□ -2.48
PPFIA2-215ENST00000549344 VPS13BQ7Z7G8 4022 aa-0.43□□□□□ -2.48
PPFIA2-215ENST00000549344 EEA1Q15075 1411 aa-0.44□□□□□ -2.48
PPFIA2-215ENST00000549344 MMP24-AS1A0A0U1RRL7 71 aa-0.44□□□□□ -2.48
PPFIA2-215ENST00000549344 ANK3Q12955 4377 aaKnown RBP-0.44□□□□□ -2.48
PPFIA2-215ENST00000549344 A0A0C4DFX4 3053 aa-0.45□□□□□ -2.48
PPFIA2-215ENST00000549344 TLN2Q9Y4G6 2542 aa-0.45□□□□□ -2.48
PPFIA2-215ENST00000549344 IGIPA6NJ69 53 aa-0.45□□□□□ -2.48
PPFIA2-215ENST00000549344 TMEM167BQ9NRX6 74 aa-0.45□□□□□ -2.48
PPFIA2-215ENST00000549344 TIAM1Q13009 1591 aa-0.45□□□□□ -2.48
PPFIA2-215ENST00000549344 PKHD1L1Q86WI1 4243 aa-0.46□□□□□ -2.48
PPFIA2-215ENST00000549344 A0A1B0GUL6 1792 aa-0.46□□□□□ -2.48
PPFIA2-215ENST00000549344 LINC00308Q8TCZ7 52 aa-0.46□□□□□ -2.48
PPFIA2-215ENST00000549344 ABRACLQ9P1F3 81 aa-0.46□□□□□ -2.48
PPFIA2-215ENST00000549344 KMT2CQ8NEZ4 4911 aaKnown RBP-0.46□□□□□ -2.48
PPFIA2-215ENST00000549344 RANBP2P49792 3224 aaKnown RBP-0.47□□□□□ -2.48
PPFIA2-215ENST00000549344 ALS2Q96Q42 1657 aa-0.47□□□□□ -2.48
PPFIA2-215ENST00000549344 CPS1P31327 1500 aa-0.48□□□□□ -2.49
PPFIA2-215ENST00000549344 APOBP04114 4563 aaKnown RBP-0.48□□□□□ -2.49
PPFIA2-215ENST00000549344 USP9XQ93008 2570 aaPredicted RBP-0.49□□□□□ -2.49
PPFIA2-215ENST00000549344 GLI2P10070 1586 aa-0.49□□□□□ -2.49
PPFIA2-215ENST00000549344 TNP1P09430 55 aa-0.49□□□□□ -2.49
PPFIA2-215ENST00000549344 DNAH3Q8TD57 4116 aa-0.49□□□□□ -2.49
PPFIA2-215ENST00000549344 KRTAP20-2Q3LI61 65 aa-0.5□□□□□ -2.49
PPFIA2-215ENST00000549344 KAAG1Q9UBP8 84 aa-0.5□□□□□ -2.49
PPFIA2-215ENST00000549344 STARD9Q9P2P6 4700 aa-0.5□□□□□ -2.49
PPFIA2-215ENST00000549344 HERC1Q15751 4861 aa-0.5□□□□□ -2.49
PPFIA2-215ENST00000549344 TRIOO75962 3097 aa-0.51□□□□□ -2.49
PPFIA2-215ENST00000549344 MT4P47944 62 aa-0.51□□□□□ -2.49
PPFIA2-215ENST00000549344 ABCA10Q8WWZ4 1543 aa-0.51□□□□□ -2.49
PPFIA2-215ENST00000549344 COL12A1Q99715 3063 aa-0.51□□□□□ -2.49
PPFIA2-215ENST00000549344 UGGT1Q9NYU2 1555 aa-0.51□□□□□ -2.49
PPFIA2-215ENST00000549344 VPS13DQ5THJ4 4388 aa-0.52□□□□□ -2.49
PPFIA2-215ENST00000549344 SMIM27A0A1W2PRY6 76 aa-0.52□□□□□ -2.49
PPFIA2-215ENST00000549344 TEX15Q9BXT5 2789 aa-0.53□□□□□ -2.49
PPFIA2-215ENST00000549344 SACSQ9NZJ4 4579 aa-0.53□□□□□ -2.49
PPFIA2-215ENST00000549344 H0YGX0 51 aa-0.53□□□□□ -2.49
PPFIA2-215ENST00000549344 FRYQ5TBA9 3013 aa-0.53□□□□□ -2.49
PPFIA2-215ENST00000549344 ITPR1Q14643 2758 aa-0.53□□□□□ -2.49
PPFIA2-215ENST00000549344 M0QY20 66 aa-0.54□□□□□ -2.5
PPFIA2-215ENST00000549344 KRTAP19-5Q3LI72 72 aa-0.54□□□□□ -2.5
PPFIA2-215ENST00000549344 DNAH11Q96DT5 4516 aa-0.54□□□□□ -2.5
PPFIA2-215ENST00000549344 FAT1Q14517 4588 aa-0.55□□□□□ -2.5
PPFIA2-215ENST00000549344 FAM208AQ9UK61 1670 aaKnown RBP-0.55□□□□□ -2.5
PPFIA2-215ENST00000549344 UBR4Q5T4S7 5183 aa-0.55□□□□□ -2.5
PPFIA2-215ENST00000549344 PRXQ9BXM0 1461 aa-0.55□□□□□ -2.5
PPFIA2-215ENST00000549344 MUC17Q685J3 4493 aa-0.56□□□□□ -2.5
PPFIA2-215ENST00000549344 MAST1Q9Y2H9 1570 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms