RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 Q75L30 129 aa7.3□□□□□ -1.24
PTCH1-217ENST00000548420 A0A1B0GV72 72 aa7.29□□□□□ -1.24
PTCH1-217ENST00000548420 CCKP06307 115 aa7.29□□□□□ -1.24
PTCH1-217ENST00000548420 RBM3P98179 157 aaKnown RBP7.29□□□□□ -1.24
PTCH1-217ENST00000548420 NAA38Q9BRA0 125 aaKnown RBP7.29□□□□□ -1.24
PTCH1-217ENST00000548420 ATXN8Q156A1 80 aa7.28□□□□□ -1.24
PTCH1-217ENST00000548420 LINC00472Q9H8W2 130 aa7.27□□□□□ -1.25
PTCH1-217ENST00000548420 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
PTCH1-217ENST00000548420 LINC00846Q9NV44 126 aa7.26□□□□□ -1.25
PTCH1-217ENST00000548420 MT1FP04733 61 aa7.25□□□□□ -1.25
PTCH1-217ENST00000548420 DSCR8Q96T75 97 aa7.25□□□□□ -1.25
PTCH1-217ENST00000548420 A8MUU9 505 aa7.24□□□□□ -1.25
PTCH1-217ENST00000548420 TRBV20-1A0A075B6N2 111 aa7.23□□□□□ -1.25
PTCH1-217ENST00000548420 C9JAW5 83 aa7.22□□□□□ -1.25
PTCH1-217ENST00000548420 IGKV4-1P06312 121 aa7.22□□□□□ -1.25
PTCH1-217ENST00000548420 JMJD7-PLA2G4BH0Y9G9 81 aa7.21□□□□□ -1.26
PTCH1-217ENST00000548420 BATFQ16520 125 aa7.21□□□□□ -1.26
PTCH1-217ENST00000548420 LYRM7Q5U5X0 104 aa7.21□□□□□ -1.26
PTCH1-217ENST00000548420 ATP11AUNQ6ZP68 121 aa7.21□□□□□ -1.26
PTCH1-217ENST00000548420 SIGMAR1Q99720 223 aa7.21□□□□□ -1.26
PTCH1-217ENST00000548420 TAX1BP3O14907 124 aa7.2□□□□□ -1.26
PTCH1-217ENST00000548420 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 C9orf118A6NHY6 69 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 DSCR10P59022 87 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 LINC00313P59037 77 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 DEFB116Q30KQ4 102 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 Q6ZQT0 140 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 VPS25Q9BRG1 176 aa7.19□□□□□ -1.26
PTCH1-217ENST00000548420 A0A1B0GW54 56 aa7.18□□□□□ -1.26
PTCH1-217ENST00000548420 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
PTCH1-217ENST00000548420 PDE6GP18545 87 aa7.17□□□□□ -1.26
PTCH1-217ENST00000548420 A0A1W2PPM0 123 aa7.15□□□□□ -1.26
PTCH1-217ENST00000548420 KMT2DO14686 5537 aa7.14□□□□□ -1.27
PTCH1-217ENST00000548420 J3KT08 172 aa7.13□□□□□ -1.27
PTCH1-217ENST00000548420 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
PTCH1-217ENST00000548420 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
PTCH1-217ENST00000548420 IGHV6-1A0A0B4J1U7 121 aa7.11□□□□□ -1.27
PTCH1-217ENST00000548420 C8orf87E5RJ46 101 aa7.11□□□□□ -1.27
PTCH1-217ENST00000548420 H3BT86 120 aa7.11□□□□□ -1.27
PTCH1-217ENST00000548420 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.27
PTCH1-217ENST00000548420 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
PTCH1-217ENST00000548420 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.27
PTCH1-217ENST00000548420 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
PTCH1-217ENST00000548420 A8MWP4 228 aa7.04□□□□□ -1.28
PTCH1-217ENST00000548420 NDUFB1O75438 58 aa7.04□□□□□ -1.28
PTCH1-217ENST00000548420 COL5A1-AS1Q5SY13 56 aa7.04□□□□□ -1.28
PTCH1-217ENST00000548420 SPCS1Q9Y6A9 102 aa7.03□□□□□ -1.28
PTCH1-217ENST00000548420 MDN1Q9NU22 5596 aa7.02□□□□□ -1.29
PTCH1-217ENST00000548420 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
PTCH1-217ENST00000548420 NREPQ16612 68 aa7.02□□□□□ -1.29
PTCH1-217ENST00000548420 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
PTCH1-217ENST00000548420 PRR15Q8IV56 129 aa7□□□□□ -1.29
PTCH1-217ENST00000548420 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
PTCH1-217ENST00000548420 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
PTCH1-217ENST00000548420 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
PTCH1-217ENST00000548420 H3BS24 57 aa6.97□□□□□ -1.29
PTCH1-217ENST00000548420 HRES1P13985 223 aa6.97□□□□□ -1.29
PTCH1-217ENST00000548420 ZCCHC13Q8WW36 166 aaKnown RBP6.97□□□□□ -1.29
PTCH1-217ENST00000548420 GPR98Q8WXG9 6306 aa6.96□□□□□ -1.3
PTCH1-217ENST00000548420 K7EP34 96 aa6.95□□□□□ -1.3
PTCH1-217ENST00000548420 Q6ZVQ6 151 aa6.95□□□□□ -1.3
PTCH1-217ENST00000548420 MMP24-AS1A0A0U1RRL7 71 aa6.93□□□□□ -1.3
PTCH1-217ENST00000548420 KRTAP5-9P26371 169 aa6.92□□□□□ -1.3
PTCH1-217ENST00000548420 K7EQZ3 153 aa6.91□□□□□ -1.3
PTCH1-217ENST00000548420 BPY2O14599 106 aa6.9□□□□□ -1.3
PTCH1-217ENST00000548420 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.3
PTCH1-217ENST00000548420 SPINK7P58062 85 aa6.89□□□□□ -1.31
PTCH1-217ENST00000548420 MRPL34Q9BQ48 92 aaKnown RBP6.89□□□□□ -1.31
PTCH1-217ENST00000548420 PCP4L1A6NKN8 68 aa6.88□□□□□ -1.31
PTCH1-217ENST00000548420 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
PTCH1-217ENST00000548420 hDV103S1A0JD37 113 aa6.87□□□□□ -1.31
PTCH1-217ENST00000548420 GTF2H5Q6ZYL4 71 aa6.86□□□□□ -1.31
PTCH1-217ENST00000548420 F8W1H4 67 aa6.84□□□□□ -1.31
PTCH1-217ENST00000548420 FAM236DA0A1B0GTK5 79 aa6.83□□□□□ -1.32
PTCH1-217ENST00000548420 FAM236CP0DP71 79 aa6.83□□□□□ -1.32
PTCH1-217ENST00000548420 Q8N9L7 120 aa6.82□□□□□ -1.32
PTCH1-217ENST00000548420 UBL5Q9BZL1 73 aa6.81□□□□□ -1.32
PTCH1-217ENST00000548420 KRTAP2-2Q9BYT5 123 aa6.8□□□□□ -1.32
PTCH1-217ENST00000548420 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
PTCH1-217ENST00000548420 ETDBQ3ZM63 59 aa6.79□□□□□ -1.32
PTCH1-217ENST00000548420 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
PTCH1-217ENST00000548420 Q5W150 140 aa6.77□□□□□ -1.33
PTCH1-217ENST00000548420 NDUFS5O43920 106 aa6.76□□□□□ -1.33
PTCH1-217ENST00000548420 WFDC13Q8IUB5 93 aa6.76□□□□□ -1.33
PTCH1-217ENST00000548420 HCG22E2RYF7 251 aa6.72□□□□□ -1.33
PTCH1-217ENST00000548420 CXCL6P80162 114 aa6.71□□□□□ -1.34
PTCH1-217ENST00000548420 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
PTCH1-217ENST00000548420 IGKV2-30P06310 120 aa6.67□□□□□ -1.34
PTCH1-217ENST00000548420 C7orf65Q6ZTY9 151 aa6.67□□□□□ -1.34
PTCH1-217ENST00000548420 ACYP1P07311 99 aa6.64□□□□□ -1.35
PTCH1-217ENST00000548420 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
PTCH1-217ENST00000548420 FAM240AA0A1B0GVK7 77 aa6.62□□□□□ -1.35
PTCH1-217ENST00000548420 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
PTCH1-217ENST00000548420 A6NN06 94 aa6.6□□□□□ -1.35
PTCH1-217ENST00000548420 SPRR2EP22531 72 aa6.59□□□□□ -1.35
PTCH1-217ENST00000548420 SPRR2BP35325 72 aa6.59□□□□□ -1.35
PTCH1-217ENST00000548420 SPRR2AP35326 72 aa6.59□□□□□ -1.35
PTCH1-217ENST00000548420 C4orf26Q17RF5 130 aa6.57□□□□□ -1.36
PTCH1-217ENST00000548420 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms