RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FRYQ5TBA9 3013 aa-1.53□□□□□ -2.65
CCDC38-204ENST00000546816 DYNC1H1Q14204 4646 aaKnown RBP-1.53□□□□□ -2.65
CCDC38-204ENST00000546816 THOC2Q8NI27 1593 aaKnown RBP-1.54□□□□□ -2.66
CCDC38-204ENST00000546816 HMGA1P17096 107 aaKnown RBP-1.54□□□□□ -2.66
CCDC38-204ENST00000546816 ITSN1Q15811 1721 aa-1.54□□□□□ -2.66
CCDC38-204ENST00000546816 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.55□□□□□ -2.66
CCDC38-204ENST00000546816 DEFB121Q5J5C9 76 aa-1.56□□□□□ -2.66
CCDC38-204ENST00000546816 ZC3H13Q5T200 1668 aaKnown RBP-1.56□□□□□ -2.66
CCDC38-204ENST00000546816 SPENQ96T58 3664 aaKnown RBP-1.56□□□□□ -2.66
CCDC38-204ENST00000546816 UACAQ9BZF9 1416 aa-1.57□□□□□ -2.66
CCDC38-204ENST00000546816 CFAP43Q8NDM7 1665 aa-1.58□□□□□ -2.66
CCDC38-204ENST00000546816 MRPL33O75394 65 aaKnown RBP-1.58□□□□□ -2.66
CCDC38-204ENST00000546816 RICTORQ6R327 1708 aa-1.58□□□□□ -2.66
CCDC38-204ENST00000546816 SPTBN5Q9NRC6 3674 aaKnown RBP-1.58□□□□□ -2.66
CCDC38-204ENST00000546816 C5orf42Q9H799 3197 aa-1.58□□□□□ -2.66
CCDC38-204ENST00000546816 ANKRD36CQ5JPF3 1778 aa-1.59□□□□□ -2.66
CCDC38-204ENST00000546816 KIAA0586Q9BVV6 1533 aa-1.59□□□□□ -2.66
CCDC38-204ENST00000546816 KCNQ1DNQ9H478 68 aa-1.59□□□□□ -2.66
CCDC38-204ENST00000546816 RNF17Q9BXT8 1623 aaKnown RBP-1.59□□□□□ -2.66
CCDC38-204ENST00000546816 TJP1Q07157 1748 aa-1.6□□□□□ -2.67
CCDC38-204ENST00000546816 ITSN2Q9NZM3 1697 aa-1.6□□□□□ -2.67
CCDC38-204ENST00000546816 A0A087WXM4 84 aa-1.6□□□□□ -2.67
CCDC38-204ENST00000546816 SMIM13P0DJ93 91 aa-1.6□□□□□ -2.67
CCDC38-204ENST00000546816 WT1-ASQ06250 92 aa-1.6□□□□□ -2.67
CCDC38-204ENST00000546816 TLN2Q9Y4G6 2542 aa-1.6□□□□□ -2.67
CCDC38-204ENST00000546816 ARHGAP35Q9NRY4 1499 aa-1.61□□□□□ -2.67
CCDC38-204ENST00000546816 CRIP1P50238 77 aa-1.61□□□□□ -2.67
CCDC38-204ENST00000546816 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.61□□□□□ -2.67
CCDC38-204ENST00000546816 TOGARAM1Q9Y4F4 1720 aa-1.61□□□□□ -2.67
CCDC38-204ENST00000546816 KDM5DQ9BY66 1539 aa-1.61□□□□□ -2.67
CCDC38-204ENST00000546816 SMR3BP02814 79 aaPredicted RBP-1.62□□□□□ -2.67
CCDC38-204ENST00000546816 COL6A5A8TX70 2615 aa-1.62□□□□□ -2.67
CCDC38-204ENST00000546816 PARP4Q9UKK3 1724 aaKnown RBP-1.63□□□□□ -2.67
CCDC38-204ENST00000546816 HFM1A2PYH4 1435 aa-1.63□□□□□ -2.67
CCDC38-204ENST00000546816 ST20Q9HBF5 79 aa-1.63□□□□□ -2.67
CCDC38-204ENST00000546816 BPTFQ12830 3046 aa-1.63□□□□□ -2.67
CCDC38-204ENST00000546816 IGLV5-48A0A075B6I7 105 aa-1.64□□□□□ -2.67
CCDC38-204ENST00000546816 MMP24-AS1A0A0U1RRL7 71 aa-1.64□□□□□ -2.67
CCDC38-204ENST00000546816 ITPR1Q14643 2758 aa-1.65□□□□□ -2.67
CCDC38-204ENST00000546816 RPS27P42677 84 aaKnown RBP-1.65□□□□□ -2.67
CCDC38-204ENST00000546816 MT1XP80297 61 aa-1.65□□□□□ -2.67
CCDC38-204ENST00000546816 RPS27LQ71UM5 84 aaKnown RBP-1.65□□□□□ -2.67
CCDC38-204ENST00000546816 UBL5Q9BZL1 73 aa-1.65□□□□□ -2.67
CCDC38-204ENST00000546816 RALGAPBQ86X10 1494 aa-1.65□□□□□ -2.67
CCDC38-204ENST00000546816 INO80Q9ULG1 1556 aaPredicted RBP-1.65□□□□□ -2.67
CCDC38-204ENST00000546816 CD163L1Q9NR16 1453 aa-1.66□□□□□ -2.68
CCDC38-204ENST00000546816 TNP1P09430 55 aa-1.66□□□□□ -2.68
CCDC38-204ENST00000546816 ADIRFQ15847 76 aa-1.66□□□□□ -2.68
CCDC38-204ENST00000546816 CLPSL2Q6UWE3 100 aa-1.66□□□□□ -2.68
CCDC38-204ENST00000546816 KRTAP8-1Q8IUC2 63 aa-1.67□□□□□ -2.68
CCDC38-204ENST00000546816 KIF1AQ12756 1690 aa-1.67□□□□□ -2.68
CCDC38-204ENST00000546816 H3BUT2 72 aa-1.68□□□□□ -2.68
CCDC38-204ENST00000546816 DNAH17Q9UFH2 4485 aa-1.68□□□□□ -2.68
CCDC38-204ENST00000546816 SRCAPQ6ZRS2 3230 aa-1.68□□□□□ -2.68
CCDC38-204ENST00000546816 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.69□□□□□ -2.68
CCDC38-204ENST00000546816 ABCC1P33527 1531 aa-1.69□□□□□ -2.68
CCDC38-204ENST00000546816 BVES-AS1Q5T3Y7 98 aa-1.69□□□□□ -2.68
CCDC38-204ENST00000546816 NRAPQ86VF7 1730 aa-1.69□□□□□ -2.68
CCDC38-204ENST00000546816 MINOS1Q5TGZ0 78 aa-1.7□□□□□ -2.68
CCDC38-204ENST00000546816 CEP295Q9C0D2 2601 aa-1.71□□□□□ -2.68
CCDC38-204ENST00000546816 S100A13Q99584 98 aa-1.71□□□□□ -2.68
CCDC38-204ENST00000546816 CHD7Q9P2D1 2997 aa-1.71□□□□□ -2.68
CCDC38-204ENST00000546816 CSMD1Q96PZ7 3565 aa-1.71□□□□□ -2.68
CCDC38-204ENST00000546816 DCAF1Q9Y4B6 1507 aa-1.71□□□□□ -2.68
CCDC38-204ENST00000546816 ENHOQ6UWT2 76 aa-1.72□□□□□ -2.68
CCDC38-204ENST00000546816 CDC42BPAQ5VT25 1732 aa-1.72□□□□□ -2.69
CCDC38-204ENST00000546816 MED14O60244 1454 aa-1.73□□□□□ -2.69
CCDC38-204ENST00000546816 ETDCA0A1B0GVM5 59 aa-1.73□□□□□ -2.69
CCDC38-204ENST00000546816 MT1EP04732 61 aa-1.73□□□□□ -2.69
CCDC38-204ENST00000546816 NHSQ6T4R5 1651 aa-1.74□□□□□ -2.69
CCDC38-204ENST00000546816 CFAP74Q9C0B2 1584 aa-1.74□□□□□ -2.69
CCDC38-204ENST00000546816 ERVK-7P63135 1459 aa-1.75□□□□□ -2.69
CCDC38-204ENST00000546816 LMTK2Q8IWU2 1503 aa-1.75□□□□□ -2.69
CCDC38-204ENST00000546816 H3BUA1 57 aa-1.75□□□□□ -2.69
CCDC38-204ENST00000546816 GNG2P59768 71 aa-1.75□□□□□ -2.69
CCDC38-204ENST00000546816 LY75O60449 1722 aa-1.75□□□□□ -2.69
CCDC38-204ENST00000546816 LRRIQ1Q96JM4 1722 aa-1.75□□□□□ -2.69
CCDC38-204ENST00000546816 NCBP2-AS2Q69YL0 99 aa-1.76□□□□□ -2.69
CCDC38-204ENST00000546816 ITPR2Q14571 2701 aa-1.77□□□□□ -2.69
CCDC38-204ENST00000546816 LRBAP50851 2863 aa-1.77□□□□□ -2.69
CCDC38-204ENST00000546816 MT1HL1P0DM35 61 aa-1.77□□□□□ -2.69
CCDC38-204ENST00000546816 C6orf48Q9UBA6 75 aa-1.77□□□□□ -2.69
CCDC38-204ENST00000546816 C18orf32Q8TCD1 76 aa-1.78□□□□□ -2.69
CCDC38-204ENST00000546816 NOP10Q9NPE3 64 aaKnown RBP-1.78□□□□□ -2.69
CCDC38-204ENST00000546816 SMG1Q96Q15 3661 aaKnown RBP-1.79□□□□□ -2.7
CCDC38-204ENST00000546816 MT1LQ93083 61 aa-1.8□□□□□ -2.7
CCDC38-204ENST00000546816 CFAP46Q8IYW2 2715 aa-1.8□□□□□ -2.7
CCDC38-204ENST00000546816 TRRAPQ9Y4A5 3859 aa-1.8□□□□□ -2.7
CCDC38-204ENST00000546816 MAST1Q9Y2H9 1570 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 ANKARQ7Z5J8 1434 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 DNAH10Q8IVF4 4471 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 SFTA3P0C7M3 94 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 FCER1GP30273 86 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 DEFB114Q30KQ6 69 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 MYO9AB2RTY4 2548 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 RB1CC1Q8TDY2 1594 aa-1.81□□□□□ -2.7
CCDC38-204ENST00000546816 DNAH5Q8TE73 4624 aa-1.82□□□□□ -2.7
CCDC38-204ENST00000546816 SPTAN1Q13813 2472 aaKnown RBP-1.82□□□□□ -2.7
CCDC38-204ENST00000546816 ADGRG4Q8IZF6 3080 aa-1.83□□□□□ -2.7
CCDC38-204ENST00000546816 KRTAP20-1Q3LI63 56 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms