RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 PLAC8Q9NZF1 115 aa7.43□□□□□ -1.22
LRTOMT-221ENST00000544409 IGLV5-52A0A0A0MRZ9 124 aa7.43□□□□□ -1.22
LRTOMT-221ENST00000544409 PSORS1C2Q9UIG4 136 aa7.43□□□□□ -1.22
LRTOMT-221ENST00000544409 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
LRTOMT-221ENST00000544409 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
LRTOMT-221ENST00000544409 H3BPC8 53 aa7.41□□□□□ -1.22
LRTOMT-221ENST00000544409 DNAH17Q9UFH2 4485 aa7.41□□□□□ -1.22
LRTOMT-221ENST00000544409 FBN3Q75N90 2809 aa7.4□□□□□ -1.22
LRTOMT-221ENST00000544409 IGLV7-46A0A075B6I9 117 aa7.4□□□□□ -1.23
LRTOMT-221ENST00000544409 HECTD4Q9Y4D8 3996 aa7.39□□□□□ -1.23
LRTOMT-221ENST00000544409 ZNF861PO60384 105 aa7.38□□□□□ -1.23
LRTOMT-221ENST00000544409 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
LRTOMT-221ENST00000544409 TGP01266 2768 aa7.38□□□□□ -1.23
LRTOMT-221ENST00000544409 LINC00313P59037 77 aa7.38□□□□□ -1.23
LRTOMT-221ENST00000544409 DNAH2Q9P225 4427 aa7.37□□□□□ -1.23
LRTOMT-221ENST00000544409 WWC2-AS2Q96NR7 200 aa7.37□□□□□ -1.23
LRTOMT-221ENST00000544409 LY6G6CO95867 125 aa7.36□□□□□ -1.23
LRTOMT-221ENST00000544409 MEGF8Q7Z7M0 2845 aa7.36□□□□□ -1.23
LRTOMT-221ENST00000544409 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
LRTOMT-221ENST00000544409 Q96NJ1 140 aa7.35□□□□□ -1.23
LRTOMT-221ENST00000544409 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
LRTOMT-221ENST00000544409 H3BS24 57 aa7.35□□□□□ -1.23
LRTOMT-221ENST00000544409 KMT2AQ03164 3969 aa7.35□□□□□ -1.23
LRTOMT-221ENST00000544409 ANAPC11Q9NYG5 84 aa7.33□□□□□ -1.24
LRTOMT-221ENST00000544409 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
LRTOMT-221ENST00000544409 IGLV7-43P04211 117 aa7.31□□□□□ -1.24
LRTOMT-221ENST00000544409 HRES1P13985 223 aa7.29□□□□□ -1.24
LRTOMT-221ENST00000544409 CDK2AP2O75956 126 aa7.29□□□□□ -1.24
LRTOMT-221ENST00000544409 C8orf17Q9NRJ1 99 aa7.29□□□□□ -1.24
LRTOMT-221ENST00000544409 DNAH6Q9C0G6 4158 aa7.28□□□□□ -1.24
LRTOMT-221ENST00000544409 A0A1B0GVX0 72 aa7.27□□□□□ -1.25
LRTOMT-221ENST00000544409 ASB16-AS1Q495Z4 193 aa7.27□□□□□ -1.25
LRTOMT-221ENST00000544409 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
LRTOMT-221ENST00000544409 PRR26Q8N8Z3 221 aa7.26□□□□□ -1.25
LRTOMT-221ENST00000544409 IGHV6-1A0A0B4J1U7 121 aa7.26□□□□□ -1.25
LRTOMT-221ENST00000544409 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
LRTOMT-221ENST00000544409 FRAS1Q86XX4 4008 aa7.25□□□□□ -1.25
LRTOMT-221ENST00000544409 KRTAP10-2P60368 255 aa7.24□□□□□ -1.25
LRTOMT-221ENST00000544409 CIRBP-AS1Q8TBR5 109 aa7.24□□□□□ -1.25
LRTOMT-221ENST00000544409 SSBP3-AS1Q7Z2R9 100 aa7.21□□□□□ -1.26
LRTOMT-221ENST00000544409 MRPL34Q9BQ48 92 aaKnown RBP7.21□□□□□ -1.26
LRTOMT-221ENST00000544409 DNAH5Q8TE73 4624 aa7.2□□□□□ -1.26
LRTOMT-221ENST00000544409 PLA2G1BP04054 148 aaKnown RBP7.19□□□□□ -1.26
LRTOMT-221ENST00000544409 SPINK6Q6UWN8 80 aa7.19□□□□□ -1.26
LRTOMT-221ENST00000544409 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
LRTOMT-221ENST00000544409 DNAH11Q96DT5 4516 aa7.19□□□□□ -1.26
LRTOMT-221ENST00000544409 A0A087X002 238 aa7.17□□□□□ -1.26
LRTOMT-221ENST00000544409 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
LRTOMT-221ENST00000544409 Q6ZSA8 131 aa7.17□□□□□ -1.26
LRTOMT-221ENST00000544409 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
LRTOMT-221ENST00000544409 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
LRTOMT-221ENST00000544409 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
LRTOMT-221ENST00000544409 PKD1P98161 4303 aa7.09□□□□□ -1.27
LRTOMT-221ENST00000544409 FAT2Q9NYQ8 4349 aa7.08□□□□□ -1.28
LRTOMT-221ENST00000544409 A0A1B0GU69 56 aa7.08□□□□□ -1.28
LRTOMT-221ENST00000544409 RETNLBQ9BQ08 111 aa7.08□□□□□ -1.28
LRTOMT-221ENST00000544409 HYDINQ4G0P3 5121 aa7.06□□□□□ -1.28
LRTOMT-221ENST00000544409 ACYP2P14621 99 aa7.06□□□□□ -1.28
LRTOMT-221ENST00000544409 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
LRTOMT-221ENST00000544409 Q5W150 140 aa7.05□□□□□ -1.28
LRTOMT-221ENST00000544409 KRTAP1-4P0C5Y4 121 aa7.04□□□□□ -1.28
LRTOMT-221ENST00000544409 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
LRTOMT-221ENST00000544409 KRTAP13-3Q3SY46 172 aa7.04□□□□□ -1.28
LRTOMT-221ENST00000544409 MIR22HGQ0VDD5 57 aa7.04□□□□□ -1.28
LRTOMT-221ENST00000544409 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
LRTOMT-221ENST00000544409 UQCR11O14957 56 aa6.99□□□□□ -1.29
LRTOMT-221ENST00000544409 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
LRTOMT-221ENST00000544409 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.29
LRTOMT-221ENST00000544409 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
LRTOMT-221ENST00000544409 SPINK1P00995 79 aa6.94□□□□□ -1.3
LRTOMT-221ENST00000544409 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
LRTOMT-221ENST00000544409 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
LRTOMT-221ENST00000544409 SACSQ9NZJ4 4579 aa6.9□□□□□ -1.31
LRTOMT-221ENST00000544409 LINC00304Q8N9R0 145 aa6.88□□□□□ -1.31
LRTOMT-221ENST00000544409 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
LRTOMT-221ENST00000544409 SMR3BP02814 79 aaPredicted RBP6.85□□□□□ -1.31
LRTOMT-221ENST00000544409 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
LRTOMT-221ENST00000544409 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
LRTOMT-221ENST00000544409 DYNC1H1Q14204 4646 aaKnown RBP6.83□□□□□ -1.32
LRTOMT-221ENST00000544409 IGKV2D-30A0A075B6S6 120 aa6.83□□□□□ -1.32
LRTOMT-221ENST00000544409 FLG2Q5D862 2391 aaPredicted RBP6.81□□□□□ -1.32
LRTOMT-221ENST00000544409 ROMO1P60602 79 aa6.81□□□□□ -1.32
LRTOMT-221ENST00000544409 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
LRTOMT-221ENST00000544409 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
LRTOMT-221ENST00000544409 KMT2CQ8NEZ4 4911 aaKnown RBP6.75□□□□□ -1.33
LRTOMT-221ENST00000544409 APOBP04114 4563 aaKnown RBP6.75□□□□□ -1.33
LRTOMT-221ENST00000544409 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
LRTOMT-221ENST00000544409 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
LRTOMT-221ENST00000544409 PKHD1L1Q86WI1 4243 aa6.72□□□□□ -1.33
LRTOMT-221ENST00000544409 FAT1Q14517 4588 aa6.71□□□□□ -1.34
LRTOMT-221ENST00000544409 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
LRTOMT-221ENST00000544409 A8MUU9 505 aa6.7□□□□□ -1.34
LRTOMT-221ENST00000544409 RYR2Q92736 4967 aa6.68□□□□□ -1.34
LRTOMT-221ENST00000544409 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
LRTOMT-221ENST00000544409 H0YAA0 97 aa6.67□□□□□ -1.34
LRTOMT-221ENST00000544409 P0C880 135 aa6.65□□□□□ -1.34
LRTOMT-221ENST00000544409 Q8N1X5 172 aa6.65□□□□□ -1.35
LRTOMT-221ENST00000544409 RYR3Q15413 4870 aa6.6□□□□□ -1.35
LRTOMT-221ENST00000544409 A0A1B0GU33 70 aa6.55□□□□□ -1.36
LRTOMT-221ENST00000544409 Q5VSD8 79 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms