RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 DEFB106AQ8N104 65 aa1.17□□□□□ -2.22
MRPL48-211ENST00000543058 KAAG1Q9UBP8 84 aa1.17□□□□□ -2.22
MRPL48-211ENST00000543058 GOLGA4Q13439 2230 aaKnown RBP1.16□□□□□ -2.22
MRPL48-211ENST00000543058 ITPR3Q14573 2671 aa1.16□□□□□ -2.22
MRPL48-211ENST00000543058 PTPRQQ9UMZ3 2332 aa1.16□□□□□ -2.22
MRPL48-211ENST00000543058 CREBBPQ92793 2442 aa1.16□□□□□ -2.22
MRPL48-211ENST00000543058 KALRNO60229 2985 aa1.16□□□□□ -2.22
MRPL48-211ENST00000543058 K7EIL1 84 aa1.16□□□□□ -2.22
MRPL48-211ENST00000543058 TMEM167AQ8TBQ9 72 aa1.16□□□□□ -2.22
MRPL48-211ENST00000543058 CFAP46Q8IYW2 2715 aa1.16□□□□□ -2.22
MRPL48-211ENST00000543058 URB1O60287 2271 aaKnown RBP1.15□□□□□ -2.22
MRPL48-211ENST00000543058 DOPEY2Q9Y3R5 2298 aa1.15□□□□□ -2.22
MRPL48-211ENST00000543058 SPTAN1Q13813 2472 aaKnown RBP1.15□□□□□ -2.22
MRPL48-211ENST00000543058 CSMD1Q96PZ7 3565 aa1.15□□□□□ -2.23
MRPL48-211ENST00000543058 APC2O95996 2303 aa1.15□□□□□ -2.23
MRPL48-211ENST00000543058 WT1-ASQ06250 92 aa1.15□□□□□ -2.23
MRPL48-211ENST00000543058 K7EIM0 57 aa1.14□□□□□ -2.23
MRPL48-211ENST00000543058 ALMS1Q8TCU4 4167 aa1.14□□□□□ -2.23
MRPL48-211ENST00000543058 POLQO75417 2590 aa1.14□□□□□ -2.23
MRPL48-211ENST00000543058 SPENQ96T58 3664 aaKnown RBP1.14□□□□□ -2.23
MRPL48-211ENST00000543058 ACACAQ13085 2346 aa1.14□□□□□ -2.23
MRPL48-211ENST00000543058 CACNA1EQ15878 2313 aa1.14□□□□□ -2.23
MRPL48-211ENST00000543058 ASCC3Q8N3C0 2202 aaKnown RBP1.13□□□□□ -2.23
MRPL48-211ENST00000543058 NAV3Q8IVL0 2385 aa1.13□□□□□ -2.23
MRPL48-211ENST00000543058 COL6A6A6NMZ7 2263 aa1.13□□□□□ -2.23
MRPL48-211ENST00000543058 LAMA1P25391 3075 aa1.13□□□□□ -2.23
MRPL48-211ENST00000543058 H3BUA1 57 aa1.13□□□□□ -2.23
MRPL48-211ENST00000543058 CLPSL2Q6UWE3 100 aa1.13□□□□□ -2.23
MRPL48-211ENST00000543058 PCNX1Q96RV3 2341 aa1.13□□□□□ -2.23
MRPL48-211ENST00000543058 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
MRPL48-211ENST00000543058 SETD2Q9BYW2 2564 aaPredicted RBP1.12□□□□□ -2.23
MRPL48-211ENST00000543058 NF1P21359 2839 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 ATMQ13315 3056 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 MGAQ8IWI9 3026 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 A8MTW9 85 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 SPRR1AP35321 89 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 DEFB109BQ30KR1 87 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 RPL39P5Q59GN2 51 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 Q5VSD8 79 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 TOMM7Q9P0U1 55 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 ABCA2Q9BZC7 2435 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 F8P00451 2351 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 CSMD2Q7Z408 3487 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 AHCTF1Q8WYP5 2266 aa1.12□□□□□ -2.23
MRPL48-211ENST00000543058 USP9YO00507 2555 aaPredicted RBP1.11□□□□□ -2.23
MRPL48-211ENST00000543058 UTP20O75691 2785 aaKnown RBP1.11□□□□□ -2.23
MRPL48-211ENST00000543058 CADP27708 2225 aa1.11□□□□□ -2.23
MRPL48-211ENST00000543058 OTOGQ6ZRI0 2925 aa1.11□□□□□ -2.23
MRPL48-211ENST00000543058 PRO0255Q9UI72 69 aa1.11□□□□□ -2.23
MRPL48-211ENST00000543058 APLNQ9ULZ1 77 aa1.11□□□□□ -2.23
MRPL48-211ENST00000543058 BSNQ9UPA5 3926 aa1.11□□□□□ -2.23
MRPL48-211ENST00000543058 ITPR2Q14571 2701 aa1.1□□□□□ -2.23
MRPL48-211ENST00000543058 ADGRG4Q8IZF6 3080 aa1.1□□□□□ -2.23
MRPL48-211ENST00000543058 TLN1Q9Y490 2541 aaKnown RBP1.1□□□□□ -2.23
MRPL48-211ENST00000543058 DEFB105AQ8NG35 78 aa1.1□□□□□ -2.23
MRPL48-211ENST00000543058 DEFB104AQ8WTQ1 72 aa1.1□□□□□ -2.23
MRPL48-211ENST00000543058 LRBAP50851 2863 aa1.1□□□□□ -2.23
MRPL48-211ENST00000543058 SPG11Q96JI7 2443 aa1.1□□□□□ -2.23
MRPL48-211ENST00000543058 BOD1L1Q8NFC6 3051 aa1.1□□□□□ -2.23
MRPL48-211ENST00000543058 HIVEP1P15822 2718 aa1.09□□□□□ -2.23
MRPL48-211ENST00000543058 FLNCQ14315 2725 aa1.09□□□□□ -2.23
MRPL48-211ENST00000543058 CELSR1Q9NYQ6 3014 aa1.09□□□□□ -2.23
MRPL48-211ENST00000543058 LRRK2Q5S007 2527 aa1.09□□□□□ -2.23
MRPL48-211ENST00000543058 SMR3AQ99954 134 aa1.09□□□□□ -2.23
MRPL48-211ENST00000543058 KNTC1P50748 2209 aa1.09□□□□□ -2.24
MRPL48-211ENST00000543058 ABCA1O95477 2261 aa1.09□□□□□ -2.24
MRPL48-211ENST00000543058 CELSR2Q9HCU4 2923 aa1.09□□□□□ -2.24
MRPL48-211ENST00000543058 PDZD2O15018 2839 aa1.08□□□□□ -2.24
MRPL48-211ENST00000543058 MTORP42345 2549 aa1.08□□□□□ -2.24
MRPL48-211ENST00000543058 DEFB108AA8MXU0 73 aa1.08□□□□□ -2.24
MRPL48-211ENST00000543058 SPRR1BP22528 89 aa1.08□□□□□ -2.24
MRPL48-211ENST00000543058 S4R3F8 94 aa1.08□□□□□ -2.24
MRPL48-211ENST00000543058 HIVEP3Q5T1R4 2406 aa1.08□□□□□ -2.24
MRPL48-211ENST00000543058 ANKHD1Q8IWZ3 2542 aaKnown RBP1.08□□□□□ -2.24
MRPL48-211ENST00000543058 SPTBN1Q01082 2364 aaKnown RBP1.07□□□□□ -2.24
MRPL48-211ENST00000543058 NBEAL1Q6ZS30 2694 aa1.07□□□□□ -2.24
MRPL48-211ENST00000543058 AKAP9Q99996 3911 aa1.07□□□□□ -2.24
MRPL48-211ENST00000543058 PRLHP81277 87 aa1.07□□□□□ -2.24
MRPL48-211ENST00000543058 KLK9Q2XQG4 91 aa1.07□□□□□ -2.24
MRPL48-211ENST00000543058 RYR3Q15413 4870 aa1.07□□□□□ -2.24
MRPL48-211ENST00000543058 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.24
MRPL48-211ENST00000543058 NBASA2RRP1 2371 aa1.07□□□□□ -2.24
MRPL48-211ENST00000543058 CRYBG3Q68DQ2 2970 aa1.07□□□□□ -2.24
MRPL48-211ENST00000543058 ZNF469Q96JG9 3925 aaPredicted RBP1.06□□□□□ -2.24
MRPL48-211ENST00000543058 APCP25054 2843 aa1.06□□□□□ -2.24
MRPL48-211ENST00000543058 NIPBLQ6KC79 2804 aaeCLIP1.06□□□□□ -2.24
MRPL48-211ENST00000543058 U3KQA8 63 aa1.06□□□□□ -2.24
MRPL48-211ENST00000543058 CUBNO60494 3623 aa1.06□□□□□ -2.24
MRPL48-211ENST00000543058 CSPG4Q6UVK1 2322 aa1.05□□□□□ -2.24
MRPL48-211ENST00000543058 CENPEQ02224 2701 aa1.05□□□□□ -2.24
MRPL48-211ENST00000543058 CCDC168Q8NDH2 2452 aa1.05□□□□□ -2.24
MRPL48-211ENST00000543058 ATRQ13535 2644 aa1.05□□□□□ -2.24
MRPL48-211ENST00000543058 KMT2CQ8NEZ4 4911 aaKnown RBP1.05□□□□□ -2.24
MRPL48-211ENST00000543058 EPPK1P58107 5090 aaKnown RBP1.05□□□□□ -2.24
MRPL48-211ENST00000543058 BIRC6Q9NR09 4857 aa1.05□□□□□ -2.24
MRPL48-211ENST00000543058 KRTAP10-4P60372 401 aaPredicted RBP1.04□□□□□ -2.24
MRPL48-211ENST00000543058 DEFB133Q30KQ1 61 aa1.04□□□□□ -2.24
MRPL48-211ENST00000543058 STAB1Q9NY15 2570 aa1.03□□□□□ -2.24
MRPL48-211ENST00000543058 COL6A5A8TX70 2615 aa1.03□□□□□ -2.24
MRPL48-211ENST00000543058 KNL1Q8NG31 2342 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms