RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 KRTAP21-3Q3LHN1 58 aa10.34□□□□□ -0.75
NELFA-216ENST00000542778 CHTF8P0CG12 524 aa10.34□□□□□ -0.75
NELFA-216ENST00000542778 LINC00313P59037 77 aa10.32□□□□□ -0.76
NELFA-216ENST00000542778 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
NELFA-216ENST00000542778 Q96NJ1 140 aa10.3□□□□□ -0.76
NELFA-216ENST00000542778 C8orf17Q9NRJ1 99 aa10.29□□□□□ -0.76
NELFA-216ENST00000542778 PRAC1Q96KF2 57 aa10.28□□□□□ -0.76
NELFA-216ENST00000542778 PANO1I0J062 215 aa10.27□□□□□ -0.77
NELFA-216ENST00000542778 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
NELFA-216ENST00000542778 DNAH6Q9C0G6 4158 aa10.25□□□□□ -0.77
NELFA-216ENST00000542778 LY6G6CO95867 125 aa10.25□□□□□ -0.77
NELFA-216ENST00000542778 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
NELFA-216ENST00000542778 DNAH17Q9UFH2 4485 aa10.24□□□□□ -0.77
NELFA-216ENST00000542778 ALMS1Q8TCU4 4167 aa10.23□□□□□ -0.77
NELFA-216ENST00000542778 FRAS1Q86XX4 4008 aa10.23□□□□□ -0.77
NELFA-216ENST00000542778 ADM2Q7Z4H4 148 aa10.21□□□□□ -0.77
NELFA-216ENST00000542778 IGHV6-1A0A0B4J1U7 121 aa10.2□□□□□ -0.78
NELFA-216ENST00000542778 A0A087WTM6 91 aa10.19□□□□□ -0.78
NELFA-216ENST00000542778 C14orf177Q52M58 125 aa10.19□□□□□ -0.78
NELFA-216ENST00000542778 A0A1B0GVX0 72 aa10.19□□□□□ -0.78
NELFA-216ENST00000542778 PLA2G1BP04054 148 aaKnown RBP10.19□□□□□ -0.78
NELFA-216ENST00000542778 MRPL34Q9BQ48 92 aaKnown RBP10.18□□□□□ -0.78
NELFA-216ENST00000542778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
NELFA-216ENST00000542778 DNAH8Q96JB1 4490 aa10.16□□□□□ -0.78
NELFA-216ENST00000542778 DNAH5Q8TE73 4624 aa10.15□□□□□ -0.78
NELFA-216ENST00000542778 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.78
NELFA-216ENST00000542778 LINC01554Q52M75 96 aa10.14□□□□□ -0.79
NELFA-216ENST00000542778 WWC2-AS2Q96NR7 200 aa10.14□□□□□ -0.79
NELFA-216ENST00000542778 IGLV9-49A0A0B4J1Y8 123 aa10.13□□□□□ -0.79
NELFA-216ENST00000542778 A0A087X002 238 aa10.12□□□□□ -0.79
NELFA-216ENST00000542778 NOTCH2NLQ7Z3S9 236 aa10.12□□□□□ -0.79
NELFA-216ENST00000542778 FAT2Q9NYQ8 4349 aa10.12□□□□□ -0.79
NELFA-216ENST00000542778 KRTAP13-1Q8IUC0 172 aa10.11□□□□□ -0.79
NELFA-216ENST00000542778 C1orf134Q5TEV5 83 aa10.11□□□□□ -0.79
NELFA-216ENST00000542778 RTL8CO15255 209 aa10.1□□□□□ -0.79
NELFA-216ENST00000542778 CDK2AP2O75956 126 aa10.1□□□□□ -0.79
NELFA-216ENST00000542778 PKD1P98161 4303 aa10.1□□□□□ -0.79
NELFA-216ENST00000542778 ACYP2P14621 99 aa10.09□□□□□ -0.79
NELFA-216ENST00000542778 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
NELFA-216ENST00000542778 Q5W150 140 aa10.08□□□□□ -0.8
NELFA-216ENST00000542778 SPATA8Q6RVD6 105 aa10.06□□□□□ -0.8
NELFA-216ENST00000542778 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
NELFA-216ENST00000542778 SACSQ9NZJ4 4579 aa10.06□□□□□ -0.8
NELFA-216ENST00000542778 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
NELFA-216ENST00000542778 A0A1B0GU69 56 aa10.02□□□□□ -0.8
NELFA-216ENST00000542778 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
NELFA-216ENST00000542778 H3BS24 57 aa10.01□□□□□ -0.81
NELFA-216ENST00000542778 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
NELFA-216ENST00000542778 LINC00483Q53H64 154 aa10□□□□□ -0.81
NELFA-216ENST00000542778 PKHD1P08F94 4074 aa9.98□□□□□ -0.81
NELFA-216ENST00000542778 MIR22HGQ0VDD5 57 aa9.96□□□□□ -0.81
NELFA-216ENST00000542778 LRP1BQ9NZR2 4599 aa9.93□□□□□ -0.82
NELFA-216ENST00000542778 KMT2CQ8NEZ4 4911 aaKnown RBP9.93□□□□□ -0.82
NELFA-216ENST00000542778 UQCR11O14957 56 aa9.92□□□□□ -0.82
NELFA-216ENST00000542778 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
NELFA-216ENST00000542778 CSAG1Q6PB30 78 aa9.9□□□□□ -0.83
NELFA-216ENST00000542778 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.83
NELFA-216ENST00000542778 ZNF706Q9Y5V0 76 aaPredicted RBP9.88□□□□□ -0.83
NELFA-216ENST00000542778 ANAPC11Q9NYG5 84 aa9.88□□□□□ -0.83
NELFA-216ENST00000542778 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
NELFA-216ENST00000542778 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
NELFA-216ENST00000542778 RETNLBQ9BQ08 111 aa9.84□□□□□ -0.83
NELFA-216ENST00000542778 RYR2Q92736 4967 aa9.83□□□□□ -0.84
NELFA-216ENST00000542778 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
NELFA-216ENST00000542778 IGKV2-30P06310 120 aa9.79□□□□□ -0.84
NELFA-216ENST00000542778 FAM229AH3BQW9 127 aa9.78□□□□□ -0.84
NELFA-216ENST00000542778 ZNF861PO60384 105 aa9.77□□□□□ -0.85
NELFA-216ENST00000542778 DYNC1H1Q14204 4646 aaKnown RBP9.75□□□□□ -0.85
NELFA-216ENST00000542778 Q6ZSA8 131 aa9.74□□□□□ -0.85
NELFA-216ENST00000542778 IGLV7-43P04211 117 aa9.71□□□□□ -0.85
NELFA-216ENST00000542778 RYR3Q15413 4870 aa9.68□□□□□ -0.86
NELFA-216ENST00000542778 FAT1Q14517 4588 aa9.64□□□□□ -0.87
NELFA-216ENST00000542778 APOBP04114 4563 aaKnown RBP9.62□□□□□ -0.87
NELFA-216ENST00000542778 IGKV2D-30A0A075B6S6 120 aa9.6□□□□□ -0.87
NELFA-216ENST00000542778 A0A1B0GVY2 172 aa9.59□□□□□ -0.87
NELFA-216ENST00000542778 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
NELFA-216ENST00000542778 SMR3BP02814 79 aaPredicted RBP9.58□□□□□ -0.88
NELFA-216ENST00000542778 A8MUU9 505 aa9.56□□□□□ -0.88
NELFA-216ENST00000542778 SSBP3-AS1Q7Z2R9 100 aa9.56□□□□□ -0.88
NELFA-216ENST00000542778 KRTAP25-1Q3LHN0 102 aa9.55□□□□□ -0.88
NELFA-216ENST00000542778 SPINK1P00995 79 aa9.53□□□□□ -0.88
NELFA-216ENST00000542778 ROMO1P60602 79 aa9.51□□□□□ -0.89
NELFA-216ENST00000542778 KRTAP13-2Q52LG2 175 aa9.51□□□□□ -0.89
NELFA-216ENST00000542778 H0YAA0 97 aa9.5□□□□□ -0.89
NELFA-216ENST00000542778 LINC00304Q8N9R0 145 aa9.49□□□□□ -0.89
NELFA-216ENST00000542778 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
NELFA-216ENST00000542778 Q8N1X5 172 aa9.43□□□□□ -0.9
NELFA-216ENST00000542778 KRTAP10-4P60372 401 aaPredicted RBP9.37□□□□□ -0.91
NELFA-216ENST00000542778 TYMSOSQ8TAI1 123 aa9.37□□□□□ -0.91
NELFA-216ENST00000542778 HSPG2P98160 4391 aa9.36□□□□□ -0.91
NELFA-216ENST00000542778 EPPK1P58107 5090 aaKnown RBP9.35□□□□□ -0.91
NELFA-216ENST00000542778 A0A1B0GU33 70 aa9.33□□□□□ -0.92
NELFA-216ENST00000542778 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
NELFA-216ENST00000542778 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
NELFA-216ENST00000542778 PKHD1L1Q86WI1 4243 aa9.3□□□□□ -0.92
NELFA-216ENST00000542778 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
NELFA-216ENST00000542778 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
NELFA-216ENST00000542778 KRTAP17-1Q9BYP8 105 aa9.28□□□□□ -0.92
NELFA-216ENST00000542778 RYR1P21817 5038 aa9.28□□□□□ -0.92
NELFA-216ENST00000542778 P0C880 135 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms