RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 A0A1B0GUT8 65 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 DEFA5Q01523 94 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 DEFB109BQ30KR1 87 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 LAMA1P25391 3075 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 CDC42BPAQ5VT25 1732 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 SONP18583 2426 aaKnown RBP0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 LRBAP50851 2863 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 AKAP9Q99996 3911 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 MXRA5Q9NR99 2828 aa0.65□□□□□ -2.3
SRGAP1-204ENST00000542381 SVEP1Q4LDE5 3571 aa0.65□□□□□ -2.3
SRGAP1-204ENST00000542381 KNL1Q8NG31 2342 aa0.65□□□□□ -2.3
SRGAP1-204ENST00000542381 Q5VSD8 79 aa0.65□□□□□ -2.31
SRGAP1-204ENST00000542381 ATP5EP2Q5VTU8 51 aa0.65□□□□□ -2.31
SRGAP1-204ENST00000542381 GCC2Q8IWJ2 1684 aa0.65□□□□□ -2.31
SRGAP1-204ENST00000542381 WNK2Q9Y3S1 2297 aa0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 NSD1Q96L73 2696 aaPredicted RBP0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 PRRC2CQ9Y520 2896 aaKnown RBP0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 K7EQZ3 153 aa0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 SMIM13P0DJ93 91 aa0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 HEPN1Q6WQI6 88 aa0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 PRXQ9BXM0 1461 aa0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 CENPEQ02224 2701 aa0.64□□□□□ -2.31
SRGAP1-204ENST00000542381 FAM208AQ9UK61 1670 aaKnown RBP0.63□□□□□ -2.31
SRGAP1-204ENST00000542381 TRAV21A0A0B4J279 112 aa0.63□□□□□ -2.31
SRGAP1-204ENST00000542381 SMIM31A0A1B0GVY4 71 aa0.63□□□□□ -2.31
SRGAP1-204ENST00000542381 USMG5Q96IX5 58 aa0.63□□□□□ -2.31
SRGAP1-204ENST00000542381 FXYD6Q9H0Q3 95 aa0.63□□□□□ -2.31
SRGAP1-204ENST00000542381 ABCC6O95255 1503 aa0.63□□□□□ -2.31
SRGAP1-204ENST00000542381 PCLOQ9Y6V0 5065 aa0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 UMAD1C9J7I0 102 aa0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 HMGA1P17096 107 aaKnown RBP0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 SPRR1AP35321 89 aa0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 IFI27P40305 119 aaPredicted RBP0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 DEFB112Q30KQ8 113 aa0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 U3KQA8 63 aa0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 MAP1AP78559 2803 aaPredicted RBP0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 HERC2O95714 4834 aa0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 TENM2Q9NT68 2774 aa0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 DMBT1Q9UGM3 2413 aaPredicted RBP0.62□□□□□ -2.31
SRGAP1-204ENST00000542381 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
SRGAP1-204ENST00000542381 MUC2Q02817 5179 aa0.61□□□□□ -2.31
SRGAP1-204ENST00000542381 TACC2O95359 2948 aa0.61□□□□□ -2.31
SRGAP1-204ENST00000542381 LCE6AA0A183 80 aa0.61□□□□□ -2.31
SRGAP1-204ENST00000542381 LOC730098B7Z3J9 87 aa0.61□□□□□ -2.31
SRGAP1-204ENST00000542381 IFI6P09912 130 aa0.61□□□□□ -2.31
SRGAP1-204ENST00000542381 TRRAPQ9Y4A5 3859 aa0.61□□□□□ -2.31
SRGAP1-204ENST00000542381 DEFB124Q8NES8 71 aa0.6□□□□□ -2.31
SRGAP1-204ENST00000542381 A0A1B0GUL6 1792 aa0.6□□□□□ -2.31
SRGAP1-204ENST00000542381 PRKDCP78527 4128 aaKnown RBP0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 HECTD4Q9Y4D8 3996 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 MUC5ACP98088 5654 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 FAT4Q6V0I7 4981 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 ANKRD50Q9ULJ7 1429 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 NDUFB1O75438 58 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 COX8AP10176 69 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 SPRR1BP22528 89 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 COX7BP24311 80 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 WFDC9Q8NEX5 89 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 GAFA1Q96PS6 74 aa0.59□□□□□ -2.31
SRGAP1-204ENST00000542381 HERC1Q15751 4861 aa0.59□□□□□ -2.32
SRGAP1-204ENST00000542381 A0A087WXM4 84 aa0.58□□□□□ -2.32
SRGAP1-204ENST00000542381 ANKRD36CQ5JPF3 1778 aa0.57□□□□□ -2.32
SRGAP1-204ENST00000542381 NREPQ16612 68 aa0.57□□□□□ -2.32
SRGAP1-204ENST00000542381 CRIPTQ9P021 101 aa0.57□□□□□ -2.32
SRGAP1-204ENST00000542381 HILPDAQ9Y5L2 63 aa0.57□□□□□ -2.32
SRGAP1-204ENST00000542381 MDN1Q9NU22 5596 aa0.57□□□□□ -2.32
SRGAP1-204ENST00000542381 ABCA13Q86UQ4 5058 aa0.57□□□□□ -2.32
SRGAP1-204ENST00000542381 A0A087WWC5 75 aa0.56□□□□□ -2.32
SRGAP1-204ENST00000542381 SPTY2D1-AS1A0A0U1RR47 76 aa0.56□□□□□ -2.32
SRGAP1-204ENST00000542381 CPSF4LA6NMK7 179 aaKnown RBP0.56□□□□□ -2.32
SRGAP1-204ENST00000542381 DUOX1Q9NRD9 1551 aa0.56□□□□□ -2.32
SRGAP1-204ENST00000542381 LYSTQ99698 3801 aa0.56□□□□□ -2.32
SRGAP1-204ENST00000542381 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
SRGAP1-204ENST00000542381 CMYA5Q8N3K9 4069 aa0.55□□□□□ -2.32
SRGAP1-204ENST00000542381 SACSQ9NZJ4 4579 aa0.55□□□□□ -2.32
SRGAP1-204ENST00000542381 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
SRGAP1-204ENST00000542381 H3BVH4 76 aa0.54□□□□□ -2.32
SRGAP1-204ENST00000542381 KRTAP20-1Q3LI63 56 aa0.54□□□□□ -2.32
SRGAP1-204ENST00000542381 I3L3M4 83 aa0.53□□□□□ -2.32
SRGAP1-204ENST00000542381 NDUFA4O00483 81 aa0.53□□□□□ -2.32
SRGAP1-204ENST00000542381 MRPL34Q9BQ48 92 aaKnown RBP0.53□□□□□ -2.32
SRGAP1-204ENST00000542381 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.33
SRGAP1-204ENST00000542381 ANK3Q12955 4377 aaKnown RBP0.52□□□□□ -2.33
SRGAP1-204ENST00000542381 RPL38P63173 70 aaKnown RBP0.52□□□□□ -2.33
SRGAP1-204ENST00000542381 ATXN8Q156A1 80 aa0.52□□□□□ -2.33
SRGAP1-204ENST00000542381 DEFB105AQ8NG35 78 aa0.52□□□□□ -2.33
SRGAP1-204ENST00000542381 DYNC2H1Q8NCM8 4307 aaKnown RBP0.52□□□□□ -2.33
SRGAP1-204ENST00000542381 DNAH1Q9P2D7 4330 aa0.52□□□□□ -2.33
SRGAP1-204ENST00000542381 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
SRGAP1-204ENST00000542381 SRRM2Q9UQ35 2752 aaKnown RBP0.51□□□□□ -2.33
SRGAP1-204ENST00000542381 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
SRGAP1-204ENST00000542381 NFAT5O94916 1531 aa0.51□□□□□ -2.33
SRGAP1-204ENST00000542381 C3orf79P0CE67 100 aa0.51□□□□□ -2.33
SRGAP1-204ENST00000542381 S100ZQ8WXG8 99 aa0.51□□□□□ -2.33
SRGAP1-204ENST00000542381 PKHD1P08F94 4074 aa0.5□□□□□ -2.33
SRGAP1-204ENST00000542381 ALMS1Q8TCU4 4167 aa0.5□□□□□ -2.33
SRGAP1-204ENST00000542381 KLK9Q2XQG4 91 aa0.5□□□□□ -2.33
SRGAP1-204ENST00000542381 LELP1Q5T871 98 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms