RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 SPRR1AP35321 89 aa6.81□□□□□ -1.32
ERBB2-204ENST00000541774 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
ERBB2-204ENST00000541774 CASC10Q5T4H9 136 aa6.79□□□□□ -1.32
ERBB2-204ENST00000541774 Q6ZR54 194 aa6.79□□□□□ -1.32
ERBB2-204ENST00000541774 Q96NJ1 140 aa6.79□□□□□ -1.32
ERBB2-204ENST00000541774 ROMO1P60602 79 aa6.78□□□□□ -1.32
ERBB2-204ENST00000541774 PKD1L1Q8TDX9 2849 aa6.78□□□□□ -1.32
ERBB2-204ENST00000541774 TENM3Q9P273 2699 aa6.78□□□□□ -1.32
ERBB2-204ENST00000541774 A0A0D9SG42 100 aa6.77□□□□□ -1.32
ERBB2-204ENST00000541774 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
ERBB2-204ENST00000541774 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
ERBB2-204ENST00000541774 IGLV7-43P04211 117 aa6.74□□□□□ -1.33
ERBB2-204ENST00000541774 NUPR2A6NF83 97 aa6.74□□□□□ -1.33
ERBB2-204ENST00000541774 IGLV5-52A0A0A0MRZ9 124 aa6.71□□□□□ -1.33
ERBB2-204ENST00000541774 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
ERBB2-204ENST00000541774 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
ERBB2-204ENST00000541774 Q5W150 140 aa6.69□□□□□ -1.34
ERBB2-204ENST00000541774 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
ERBB2-204ENST00000541774 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
ERBB2-204ENST00000541774 ZNF861PO60384 105 aa6.66□□□□□ -1.34
ERBB2-204ENST00000541774 TRRAPQ9Y4A5 3859 aa6.65□□□□□ -1.34
ERBB2-204ENST00000541774 A0A087X002 238 aa6.65□□□□□ -1.34
ERBB2-204ENST00000541774 TENM2Q9NT68 2774 aa6.65□□□□□ -1.35
ERBB2-204ENST00000541774 ZNF469Q96JG9 3925 aaPredicted RBP6.64□□□□□ -1.35
ERBB2-204ENST00000541774 TGP01266 2768 aa6.64□□□□□ -1.35
ERBB2-204ENST00000541774 SPRR1BP22528 89 aa6.64□□□□□ -1.35
ERBB2-204ENST00000541774 NBDYA0A0U1RRE5 68 aa6.62□□□□□ -1.35
ERBB2-204ENST00000541774 PSORS1C2Q9UIG4 136 aa6.59□□□□□ -1.35
ERBB2-204ENST00000541774 A8MUU9 505 aa6.57□□□□□ -1.36
ERBB2-204ENST00000541774 TYMSOSQ8TAI1 123 aa6.57□□□□□ -1.36
ERBB2-204ENST00000541774 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
ERBB2-204ENST00000541774 PLAC8Q9NZF1 115 aa6.53□□□□□ -1.36
ERBB2-204ENST00000541774 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
ERBB2-204ENST00000541774 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
ERBB2-204ENST00000541774 WWC2-AS2Q96NR7 200 aa6.52□□□□□ -1.37
ERBB2-204ENST00000541774 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
ERBB2-204ENST00000541774 LINC00483Q53H64 154 aa6.49□□□□□ -1.37
ERBB2-204ENST00000541774 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
ERBB2-204ENST00000541774 KRTAP1-5Q9BYS1 174 aa6.49□□□□□ -1.37
ERBB2-204ENST00000541774 PANO1I0J062 215 aa6.47□□□□□ -1.37
ERBB2-204ENST00000541774 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.37
ERBB2-204ENST00000541774 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
ERBB2-204ENST00000541774 A0A087WTM6 91 aa6.44□□□□□ -1.38
ERBB2-204ENST00000541774 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
ERBB2-204ENST00000541774 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
ERBB2-204ENST00000541774 ANK3Q12955 4377 aaKnown RBP6.42□□□□□ -1.38
ERBB2-204ENST00000541774 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
ERBB2-204ENST00000541774 SRRM2Q9UQ35 2752 aaKnown RBP6.38□□□□□ -1.39
ERBB2-204ENST00000541774 Q6ZSA8 131 aa6.31□□□□□ -1.4
ERBB2-204ENST00000541774 H0YAA0 97 aa6.26□□□□□ -1.41
ERBB2-204ENST00000541774 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
ERBB2-204ENST00000541774 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
ERBB2-204ENST00000541774 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
ERBB2-204ENST00000541774 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
ERBB2-204ENST00000541774 SEC61BP60468 96 aaKnown RBP6.21□□□□□ -1.41
ERBB2-204ENST00000541774 COL7A1Q02388 2944 aa6.21□□□□□ -1.42
ERBB2-204ENST00000541774 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
ERBB2-204ENST00000541774 S4R3F8 94 aa6.17□□□□□ -1.42
ERBB2-204ENST00000541774 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
ERBB2-204ENST00000541774 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
ERBB2-204ENST00000541774 KRTAP10-1P60331 282 aa6.15□□□□□ -1.42
ERBB2-204ENST00000541774 P0C880 135 aa6.15□□□□□ -1.43
ERBB2-204ENST00000541774 KRTAP13-1Q8IUC0 172 aa6.14□□□□□ -1.43
ERBB2-204ENST00000541774 Q6ZRN7 208 aaPredicted RBP6.11□□□□□ -1.43
ERBB2-204ENST00000541774 R4GN34 69 aa6.08□□□□□ -1.44
ERBB2-204ENST00000541774 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
ERBB2-204ENST00000541774 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
ERBB2-204ENST00000541774 M0QZ58 72 aa6.02□□□□□ -1.45
ERBB2-204ENST00000541774 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
ERBB2-204ENST00000541774 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
ERBB2-204ENST00000541774 J3QL48 77 aa5.95□□□□□ -1.46
ERBB2-204ENST00000541774 KRTAP13-2Q52LG2 175 aa5.95□□□□□ -1.46
ERBB2-204ENST00000541774 DNHD1Q96M86 4753 aa5.92□□□□□ -1.46
ERBB2-204ENST00000541774 KRTAP21-3Q3LHN1 58 aa5.9□□□□□ -1.46
ERBB2-204ENST00000541774 Q5VSD8 79 aa5.89□□□□□ -1.47
ERBB2-204ENST00000541774 KRTAP10-8P60410 259 aa5.84□□□□□ -1.47
ERBB2-204ENST00000541774 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
ERBB2-204ENST00000541774 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
ERBB2-204ENST00000541774 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
ERBB2-204ENST00000541774 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
ERBB2-204ENST00000541774 ANK2Q01484 3957 aa5.72□□□□□ -1.49
ERBB2-204ENST00000541774 DNAH9Q9NYC9 4486 aa5.71□□□□□ -1.5
ERBB2-204ENST00000541774 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
ERBB2-204ENST00000541774 PLECQ15149 4684 aaKnown RBP5.69□□□□□ -1.5
ERBB2-204ENST00000541774 PRKDCP78527 4128 aaKnown RBP5.67□□□□□ -1.5
ERBB2-204ENST00000541774 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.5
ERBB2-204ENST00000541774 DNAH10Q8IVF4 4471 aa5.65□□□□□ -1.51
ERBB2-204ENST00000541774 TNP1P09430 55 aa5.62□□□□□ -1.51
ERBB2-204ENST00000541774 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
ERBB2-204ENST00000541774 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.52
ERBB2-204ENST00000541774 STARD9Q9P2P6 4700 aa5.59□□□□□ -1.52
ERBB2-204ENST00000541774 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
ERBB2-204ENST00000541774 LYSTQ99698 3801 aa5.55□□□□□ -1.52
ERBB2-204ENST00000541774 DNAH11Q96DT5 4516 aa5.53□□□□□ -1.52
ERBB2-204ENST00000541774 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
ERBB2-204ENST00000541774 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
ERBB2-204ENST00000541774 XP32Q5T750 250 aa5.49□□□□□ -1.53
ERBB2-204ENST00000541774 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
ERBB2-204ENST00000541774 DNAH1Q9P2D7 4330 aa5.47□□□□□ -1.53
ERBB2-204ENST00000541774 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms