RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 Q6ZRX8 168 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 LZICQ8WZA0 190 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 ARHGAP5-AS1Q96IT6 56 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 NDUFA4L2Q9NRX3 87 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 TRBV6-1A0A0K0K1D8 114 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 M0R3E3 92 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 CKS1BP61024 79 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 SNRPGP62308 76 aaKnown RBP-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 LINC01590Q5TEZ4 76 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 MIC13Q5XKP0 118 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 C5orf38Q86SI9 138 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 CTAGE3PQ8IX95 158 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 TPT1P8Q9HAU6 139 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 BATF3Q9NR55 127 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 S4R3F8 94 aa-0.06□□□□□ -2.42
PRKDC-210ENST00000541488 TRAV30A0A087WSZ9 112 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 F6UZH7 168 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 M0QZ58 72 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 GCHFRP30047 84 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 S100A10P60903 97 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 RPL7L1Q6DKI1 246 aaKnown RBP-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 PP6455Q8WZ26 134 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 MAFIPQ8WZ33 124 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 R4GMQ9 66 aa-0.07□□□□□ -2.42
PRKDC-210ENST00000541488 K7EQZ3 153 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 CORTO00230 105 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 S100A3P33764 101 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 SNCAP37840 140 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 Q6ZUT4 128 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 S100A13Q99584 98 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 PSMG3Q9BT73 122 aaPredicted RBP-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 SMIM3Q9BZL3 60 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 AGPAT4-IT1Q9H0P7 198 aa-0.08□□□□□ -2.42
PRKDC-210ENST00000541488 H3BVH4 76 aa-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 ARPC5O15511 151 aa-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 SNAPC5O75971 98 aa-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 RRAS2P62070 204 aaPredicted RBP-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 Q6AWC8 147 aa-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 ZNF818PQ6ZRF7 136 aa-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 PPP3R2Q96LZ3 170 aa-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 COPZ2Q9P299 210 aa-0.09□□□□□ -2.42
PRKDC-210ENST00000541488 ETDCA0A1B0GVM5 59 aa-0.1□□□□□ -2.43
PRKDC-210ENST00000541488 LINC01546A6NGU7 62 aa-0.1□□□□□ -2.43
PRKDC-210ENST00000541488 SNRPGP15A8MWD9 76 aa-0.1□□□□□ -2.43
PRKDC-210ENST00000541488 D6R8Y8 96 aa-0.1□□□□□ -2.43
PRKDC-210ENST00000541488 H3BQ15 152 aa-0.1□□□□□ -2.43
PRKDC-210ENST00000541488 AMELXQ99217 191 aa-0.1□□□□□ -2.43
PRKDC-210ENST00000541488 TRAV21A0A0B4J279 112 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 TRBV10-3A0A0K0K1G6 114 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 K7ERU9 68 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 M0R129 80 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 NDUFB6O95139 128 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 IL5P05113 134 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 SPINK8P0C7L1 97 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 SMIM6P0DI80 62 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 IGLC2P0DOY2 106 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 FGF7P21781 194 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 UBE2G1P62253 170 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 CATR1Q13166 79 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 PDCD10Q9BUL8 212 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 CNFNQ9BYD5 112 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 PRO1933Q9H354 126 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 LINC00472Q9H8W2 130 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 TOMM7Q9P0U1 55 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 GNG8Q9UK08 70 aa-0.11□□□□□ -2.43
PRKDC-210ENST00000541488 A0A087WVE0 104 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 TRAV1-2A0A0B4J238 106 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 ZNF815PA8K554 130 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 IFNGP01579 166 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 MGPP08493 103 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 IAPPP10997 89 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 IFITM1P13164 125 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 ALKAL2Q6UX46 152 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 TSC22D3Q99576 134 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 TRGV9Q99603 122 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 CYP4F30PQ9H0H9 118 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 CMC2Q9NRP2 79 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 ARL2-SNX15V9GYD0 113 aa-0.12□□□□□ -2.43
PRKDC-210ENST00000541488 K7EP34 96 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 MT-ATP8P03928 68 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 ARMS2P0C7Q2 107 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 SPRR1AP35321 89 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 PPP3R1P63098 170 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 BAGE3Q86Y29 109 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 KCNRGQ8N5I3 272 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 DEFB105AQ8NG35 78 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 ANP32BQ92688 251 aaKnown RBP-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 TMEM191AQ9H0A3 160 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 CDC42SE2Q9NRR3 84 aa-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 PAIP2BQ9ULR5 123 aaKnown RBP-0.13□□□□□ -2.43
PRKDC-210ENST00000541488 IGLV5-48A0A075B6I7 105 aa-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 TRBV7-7A0A0K0K1E9 115 aa-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 LOC100130705A0A1B0GUX0 176 aa-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 CEBPZOSA8MTT3 80 aa-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 H3BQF6 201 aa-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 SNCGO76070 127 aa-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 CFDP00746 253 aaPredicted RBP-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 CRIP1P50238 77 aa-0.14□□□□□ -2.43
PRKDC-210ENST00000541488 RPS25P62851 125 aaKnown RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms