RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 Q5VV11 94 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 Q6ZQY7 126 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 PPDPFLQ8WWR9 84 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 A0A1W2PNM2 257 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 VAMP3Q15836 100 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 LINC00575Q6W349 94 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 TEN1Q86WV5 123 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 SMIM11BQ8TCY0 68 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 COPS9Q8WXC6 57 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 SIGMAR1Q99720 223 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 PMCHL2Q9BQD1 86 aa2.08□□□□□ -2.08
SNHG1-214ENST00000540865 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 A0A087WSZ3 146 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 hADV29S1A0JD25 119 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 H3BUT2 72 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 IFITM1P13164 125 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 KRTAP19-8Q3LI54 63 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 UQCC3Q6UW78 93 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.07□□□□□ -2.08
SNHG1-214ENST00000540865 SPRR2FQ96RM1 72 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 SNHG12Q9BXW3 62 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 HSPB8Q9UJY1 196 aa2.07□□□□□ -2.08
SNHG1-214ENST00000540865 WFDC13Q8IUB5 93 aa2.06□□□□□ -2.08
SNHG1-214ENST00000540865 ZCCHC13Q8WW36 166 aaKnown RBP2.06□□□□□ -2.08
SNHG1-214ENST00000540865 IGKV4-1P06312 121 aa2.05□□□□□ -2.08
SNHG1-214ENST00000540865 C3orf79P0CE67 100 aa2.04□□□□□ -2.08
SNHG1-214ENST00000540865 FABP4P15090 132 aa2.04□□□□□ -2.08
SNHG1-214ENST00000540865 SPRR2DP22532 72 aa2.04□□□□□ -2.08
SNHG1-214ENST00000540865 H1FX-AS1Q4G0G2 97 aa2.04□□□□□ -2.08
SNHG1-214ENST00000540865 CLLU1Q5K131 121 aa2.04□□□□□ -2.08
SNHG1-214ENST00000540865 MUSTN1Q8IVN3 82 aa2.04□□□□□ -2.08
SNHG1-214ENST00000540865 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
SNHG1-214ENST00000540865 IGHV6-1A0A0B4J1U7 121 aa2.03□□□□□ -2.08
SNHG1-214ENST00000540865 C8orf87E5RJ46 101 aa2.03□□□□□ -2.08
SNHG1-214ENST00000540865 SNAPINO95295 136 aa2.03□□□□□ -2.08
SNHG1-214ENST00000540865 SCGB1D4Q6XE38 83 aa2.03□□□□□ -2.08
SNHG1-214ENST00000540865 TTTY13Q9BZ97 58 aa2.03□□□□□ -2.08
SNHG1-214ENST00000540865 PCP4L1A6NKN8 68 aa2.02□□□□□ -2.09
SNHG1-214ENST00000540865 C12orf57Q99622 126 aa2.02□□□□□ -2.09
SNHG1-214ENST00000540865 TRGC2P03986 189 aa2.01□□□□□ -2.09
SNHG1-214ENST00000540865 RAB37Q96AX2 223 aa2.01□□□□□ -2.09
SNHG1-214ENST00000540865 YPEL4Q96NS1 127 aa2.01□□□□□ -2.09
SNHG1-214ENST00000540865 HIST1H4GQ99525 98 aa2.01□□□□□ -2.09
SNHG1-214ENST00000540865 LINC00472Q9H8W2 130 aa2.01□□□□□ -2.09
SNHG1-214ENST00000540865 TRBV7-4A0A0J9YYF1 115 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 FAM236AA0A1B0GUQ0 79 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 FAM236BA0A1B0GV22 79 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 A0A1B0GVX0 72 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 H3BMG7 143 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 SYS1-DBNDD2H3BUS1 97 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 SEC61GP60059 68 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 BVES-AS1Q5T3Y7 98 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 LINC01545Q5VT33 79 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 IMUPQ9GZP8 106 aa2□□□□□ -2.09
SNHG1-214ENST00000540865 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
SNHG1-214ENST00000540865 DSCR8Q96T75 97 aa1.99□□□□□ -2.09
SNHG1-214ENST00000540865 SNCGO76070 127 aa1.98□□□□□ -2.09
SNHG1-214ENST00000540865 IGKV3D-7A0A0C4DH55 119 aa1.97□□□□□ -2.09
SNHG1-214ENST00000540865 APOC3P02656 99 aa1.97□□□□□ -2.09
SNHG1-214ENST00000540865 LYRM7Q5U5X0 104 aa1.97□□□□□ -2.09
SNHG1-214ENST00000540865 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-214ENST00000540865 SVBPQ8N300 66 aa1.97□□□□□ -2.09
SNHG1-214ENST00000540865 ANKRD29Q8N6D5 301 aa1.97□□□□□ -2.09
SNHG1-214ENST00000540865 PRO0461Q9UI25 63 aa1.97□□□□□ -2.09
SNHG1-214ENST00000540865 FABP2P12104 132 aa1.96□□□□□ -2.1
SNHG1-214ENST00000540865 H0YGX0 51 aa1.95□□□□□ -2.1
SNHG1-214ENST00000540865 J3KT08 172 aa1.95□□□□□ -2.1
SNHG1-214ENST00000540865 TRACP01848 142 aa1.95□□□□□ -2.1
SNHG1-214ENST00000540865 KLKP1Q107X0 134 aa1.95□□□□□ -2.1
SNHG1-214ENST00000540865 NDUFA5Q16718 116 aa1.95□□□□□ -2.1
SNHG1-214ENST00000540865 C5orf47Q569G3 176 aa1.95□□□□□ -2.1
SNHG1-214ENST00000540865 A0A1B0GX51 115 aa1.94□□□□□ -2.1
SNHG1-214ENST00000540865 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
SNHG1-214ENST00000540865 NDUFB1O75438 58 aa1.93□□□□□ -2.1
SNHG1-214ENST00000540865 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SNHG1-214ENST00000540865 CCKP06307 115 aa1.93□□□□□ -2.1
SNHG1-214ENST00000540865 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
SNHG1-214ENST00000540865 C8orf17Q9NRJ1 99 aa1.93□□□□□ -2.1
SNHG1-214ENST00000540865 CRIPTQ9P021 101 aa1.93□□□□□ -2.1
SNHG1-214ENST00000540865 C2orf91Q6ZV80 131 aa1.92□□□□□ -2.1
SNHG1-214ENST00000540865 PRR15Q8IV56 129 aa1.92□□□□□ -2.1
SNHG1-214ENST00000540865 H3BQ85 93 aa1.91□□□□□ -2.1
SNHG1-214ENST00000540865 KRTDAPP60985 99 aa1.91□□□□□ -2.1
SNHG1-214ENST00000540865 MT1XP80297 61 aa1.91□□□□□ -2.1
SNHG1-214ENST00000540865 A0A1B0GV72 72 aa1.9□□□□□ -2.11
SNHG1-214ENST00000540865 C7orf65Q6ZTY9 151 aa1.9□□□□□ -2.11
SNHG1-214ENST00000540865 ATOH7Q8N100 152 aa1.9□□□□□ -2.11
SNHG1-214ENST00000540865 S4R3F8 94 aa1.9□□□□□ -2.11
SNHG1-214ENST00000540865 C4orf26Q17RF5 130 aa1.89□□□□□ -2.11
SNHG1-214ENST00000540865 LCA10Q71F78 164 aa1.89□□□□□ -2.11
SNHG1-214ENST00000540865 CAMK2N1Q7Z7J9 78 aa1.89□□□□□ -2.11
SNHG1-214ENST00000540865 Q8N9L7 120 aa1.89□□□□□ -2.11
SNHG1-214ENST00000540865 TMEM256-PLSCR3K7ERE1 68 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BKO60814 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BJP06899 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BOP23527 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BBP33778 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BDP58876 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BCP62807 126 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms