RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 MOBPQ13875 183 aa6.07□□□□□ -1.44
LMO3-224ENST00000540848 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
LMO3-224ENST00000540848 SNURFQ9Y675 71 aa6.06□□□□□ -1.44
LMO3-224ENST00000540848 KRTAP29-1A8MX34 341 aaPredicted RBP6.06□□□□□ -1.44
LMO3-224ENST00000540848 DEFB116Q30KQ4 102 aa6.05□□□□□ -1.44
LMO3-224ENST00000540848 FAM30AQ9NZY2 134 aa6.05□□□□□ -1.44
LMO3-224ENST00000540848 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
LMO3-224ENST00000540848 CASC2Q6XLA1 102 aa6.04□□□□□ -1.44
LMO3-224ENST00000540848 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
LMO3-224ENST00000540848 SRRM2Q9UQ35 2752 aaKnown RBP6.04□□□□□ -1.44
LMO3-224ENST00000540848 H3BPC8 53 aa6.03□□□□□ -1.44
LMO3-224ENST00000540848 KRTAP10-1P60331 282 aa6.03□□□□□ -1.44
LMO3-224ENST00000540848 Q96NJ1 140 aa6.03□□□□□ -1.44
LMO3-224ENST00000540848 CDK2AP2O75956 126 aa6.02□□□□□ -1.45
LMO3-224ENST00000540848 MP68P56378 58 aa6.01□□□□□ -1.45
LMO3-224ENST00000540848 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
LMO3-224ENST00000540848 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
LMO3-224ENST00000540848 SERP1Q9Y6X1 66 aa6.01□□□□□ -1.45
LMO3-224ENST00000540848 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
LMO3-224ENST00000540848 FRAS1Q86XX4 4008 aa6□□□□□ -1.45
LMO3-224ENST00000540848 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
LMO3-224ENST00000540848 hDV103S1A0JD37 113 aa5.99□□□□□ -1.45
LMO3-224ENST00000540848 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
LMO3-224ENST00000540848 TP53AIP1Q9HCN2 124 aa5.99□□□□□ -1.45
LMO3-224ENST00000540848 DNAH8Q96JB1 4490 aa5.99□□□□□ -1.45
LMO3-224ENST00000540848 Q5XG85 94 aa5.98□□□□□ -1.45
LMO3-224ENST00000540848 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
LMO3-224ENST00000540848 ANAPC11Q9NYG5 84 aa5.98□□□□□ -1.45
LMO3-224ENST00000540848 C8orf17Q9NRJ1 99 aa5.97□□□□□ -1.45
LMO3-224ENST00000540848 DNAH11Q96DT5 4516 aa5.96□□□□□ -1.46
LMO3-224ENST00000540848 DNAH5Q8TE73 4624 aa5.95□□□□□ -1.46
LMO3-224ENST00000540848 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
LMO3-224ENST00000540848 H0Y9P7 68 aa5.93□□□□□ -1.46
LMO3-224ENST00000540848 FAT2Q9NYQ8 4349 aa5.93□□□□□ -1.46
LMO3-224ENST00000540848 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
LMO3-224ENST00000540848 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
LMO3-224ENST00000540848 LIMD2Q9BT23 127 aa5.93□□□□□ -1.46
LMO3-224ENST00000540848 PKD1P98161 4303 aa5.92□□□□□ -1.46
LMO3-224ENST00000540848 SPINK6Q6UWN8 80 aa5.92□□□□□ -1.46
LMO3-224ENST00000540848 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
LMO3-224ENST00000540848 LINC00208Q96KT6 92 aa5.91□□□□□ -1.46
LMO3-224ENST00000540848 A0A087X002 238 aa5.9□□□□□ -1.46
LMO3-224ENST00000540848 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
LMO3-224ENST00000540848 KRTAP13-2Q52LG2 175 aa5.9□□□□□ -1.46
LMO3-224ENST00000540848 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
LMO3-224ENST00000540848 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
LMO3-224ENST00000540848 SMIM26A0A096LP01 95 aa5.89□□□□□ -1.47
LMO3-224ENST00000540848 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
LMO3-224ENST00000540848 OXTP01178 125 aa5.88□□□□□ -1.47
LMO3-224ENST00000540848 C1orf64Q8NEQ6 169 aa5.88□□□□□ -1.47
LMO3-224ENST00000540848 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
LMO3-224ENST00000540848 LCE1AQ5T7P2 110 aa5.87□□□□□ -1.47
LMO3-224ENST00000540848 SPINK1P00995 79 aa5.86□□□□□ -1.47
LMO3-224ENST00000540848 NDUFS5O43920 106 aa5.85□□□□□ -1.47
LMO3-224ENST00000540848 TYMSOSQ8TAI1 123 aa5.85□□□□□ -1.47
LMO3-224ENST00000540848 C1orf195Q5TG92 126 aa5.84□□□□□ -1.47
LMO3-224ENST00000540848 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
LMO3-224ENST00000540848 LINC00313P59037 77 aa5.83□□□□□ -1.48
LMO3-224ENST00000540848 LRP1BQ9NZR2 4599 aa5.81□□□□□ -1.48
LMO3-224ENST00000540848 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
LMO3-224ENST00000540848 HYDINQ4G0P3 5121 aa5.81□□□□□ -1.48
LMO3-224ENST00000540848 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
LMO3-224ENST00000540848 SACSQ9NZJ4 4579 aa5.8□□□□□ -1.48
LMO3-224ENST00000540848 IGLV7-46A0A075B6I9 117 aa5.79□□□□□ -1.48
LMO3-224ENST00000540848 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
LMO3-224ENST00000540848 LINC00304Q8N9R0 145 aa5.79□□□□□ -1.48
LMO3-224ENST00000540848 VPS13BQ7Z7G8 4022 aa5.78□□□□□ -1.48
LMO3-224ENST00000540848 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
LMO3-224ENST00000540848 FP248Q71RG6 208 aaPredicted RBP5.76□□□□□ -1.49
LMO3-224ENST00000540848 KRTAP10-4P60372 401 aaPredicted RBP5.74□□□□□ -1.49
LMO3-224ENST00000540848 PRR26Q8N8Z3 221 aa5.74□□□□□ -1.49
LMO3-224ENST00000540848 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
LMO3-224ENST00000540848 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
LMO3-224ENST00000540848 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.73□□□□□ -1.49
LMO3-224ENST00000540848 V9GYY9 64 aa5.73□□□□□ -1.49
LMO3-224ENST00000540848 PKHD1P08F94 4074 aa5.73□□□□□ -1.49
LMO3-224ENST00000540848 PRR4Q16378 134 aa5.72□□□□□ -1.49
LMO3-224ENST00000540848 C4orf26Q17RF5 130 aa5.72□□□□□ -1.49
LMO3-224ENST00000540848 Q1T7F1 81 aa5.72□□□□□ -1.49
LMO3-224ENST00000540848 Q5W150 140 aa5.72□□□□□ -1.49
LMO3-224ENST00000540848 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.5
LMO3-224ENST00000540848 PCOTHQ58A44 107 aa5.71□□□□□ -1.5
LMO3-224ENST00000540848 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
LMO3-224ENST00000540848 COA5Q86WW8 74 aa5.67□□□□□ -1.5
LMO3-224ENST00000540848 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
LMO3-224ENST00000540848 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
LMO3-224ENST00000540848 APOBP04114 4563 aaKnown RBP5.64□□□□□ -1.51
LMO3-224ENST00000540848 RYR2Q92736 4967 aa5.63□□□□□ -1.51
LMO3-224ENST00000540848 ACYP2P14621 99 aa5.63□□□□□ -1.51
LMO3-224ENST00000540848 HRES1P13985 223 aa5.61□□□□□ -1.51
LMO3-224ENST00000540848 DMAC1Q96GE9 116 aa5.61□□□□□ -1.51
LMO3-224ENST00000540848 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
LMO3-224ENST00000540848 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.51
LMO3-224ENST00000540848 A8MUU9 505 aa5.59□□□□□ -1.52
LMO3-224ENST00000540848 Q5VSD8 79 aa5.58□□□□□ -1.52
LMO3-224ENST00000540848 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
LMO3-224ENST00000540848 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
LMO3-224ENST00000540848 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
LMO3-224ENST00000540848 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
LMO3-224ENST00000540848 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms