RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 MXRA5Q9NR99 2828 aa-0.2□□□□□ -2.44
MDM2-227ENST00000540709 NHSQ6T4R5 1651 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 ITSN2Q9NZM3 1697 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 HIVEP1P15822 2718 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 FLGP20930 4061 aaPredicted RBP-0.21□□□□□ -2.44
MDM2-227ENST00000540709 SMIM27A0A1W2PRY6 76 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 TNP1P09430 55 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 LINC00308Q8TCZ7 52 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 TMEM167BQ9NRX6 74 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 KAAG1Q9UBP8 84 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 TGP01266 2768 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 MROH1Q8NDA8 1641 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 MTORP42345 2549 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 HTTP42858 3142 aa-0.21□□□□□ -2.44
MDM2-227ENST00000540709 PKD1L2Q7Z442 2459 aa-0.22□□□□□ -2.44
MDM2-227ENST00000540709 SMIM5Q71RC9 77 aa-0.22□□□□□ -2.44
MDM2-227ENST00000540709 C3P01024 1663 aa-0.22□□□□□ -2.44
MDM2-227ENST00000540709 FASNP49327 2511 aaKnown RBP-0.22□□□□□ -2.44
MDM2-227ENST00000540709 LYSTQ99698 3801 aa-0.22□□□□□ -2.45
MDM2-227ENST00000540709 KMT2CQ8NEZ4 4911 aaKnown RBP-0.23□□□□□ -2.45
MDM2-227ENST00000540709 EFCAB5A4FU69 1503 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 MADDQ8WXG6 1647 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 MT4P47944 62 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 DEFB1P60022 68 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 CLPSL2Q6UWE3 100 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 HERC1Q15751 4861 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 TACC2O95359 2948 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 ZZEF1O43149 2961 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 EEA1Q15075 1411 aa-0.23□□□□□ -2.45
MDM2-227ENST00000540709 GCN1Q92616 2671 aaKnown RBP-0.24□□□□□ -2.45
MDM2-227ENST00000540709 LAMA5O15230 3695 aa-0.24□□□□□ -2.45
MDM2-227ENST00000540709 M0QY20 66 aa-0.24□□□□□ -2.45
MDM2-227ENST00000540709 WFDC10BQ8IUB3 73 aa-0.24□□□□□ -2.45
MDM2-227ENST00000540709 ACACAQ13085 2346 aa-0.24□□□□□ -2.45
MDM2-227ENST00000540709 EPG5Q9HCE0 2579 aa-0.24□□□□□ -2.45
MDM2-227ENST00000540709 ANKRD11Q6UB99 2663 aaPredicted RBP-0.24□□□□□ -2.45
MDM2-227ENST00000540709 LY75O60449 1722 aa-0.24□□□□□ -2.45
MDM2-227ENST00000540709 CEP290O15078 2479 aa-0.25□□□□□ -2.45
MDM2-227ENST00000540709 BPTFQ12830 3046 aa-0.25□□□□□ -2.45
MDM2-227ENST00000540709 SMIM31A0A1B0GVY4 71 aa-0.25□□□□□ -2.45
MDM2-227ENST00000540709 IGIPA6NJ69 53 aa-0.25□□□□□ -2.45
MDM2-227ENST00000540709 H0YGX0 51 aa-0.25□□□□□ -2.45
MDM2-227ENST00000540709 CLASP1Q7Z460 1538 aa-0.25□□□□□ -2.45
MDM2-227ENST00000540709 TRIOO75962 3097 aa-0.25□□□□□ -2.45
MDM2-227ENST00000540709 KALRNO60229 2985 aa-0.26□□□□□ -2.45
MDM2-227ENST00000540709 PCLOQ9Y6V0 5065 aa-0.26□□□□□ -2.45
MDM2-227ENST00000540709 CPS1P31327 1500 aa-0.26□□□□□ -2.45
MDM2-227ENST00000540709 FAT1Q14517 4588 aa-0.26□□□□□ -2.45
MDM2-227ENST00000540709 LAMA1P25391 3075 aa-0.26□□□□□ -2.45
MDM2-227ENST00000540709 UTP20O75691 2785 aaKnown RBP-0.26□□□□□ -2.45
MDM2-227ENST00000540709 CDC42BPAQ5VT25 1732 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 CROCC2H7BZ55 1655 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 ABCA6Q8N139 1617 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 GLI2P10070 1586 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 TIAM1Q13009 1591 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 LRRK2Q5S007 2527 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.27□□□□□ -2.45
MDM2-227ENST00000540709 A8MTW9 85 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 M0QZ58 72 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 FAT3Q8TDW7 4589 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 TEP1Q99973 2627 aaKnown RBP-0.27□□□□□ -2.45
MDM2-227ENST00000540709 MYO18BQ8IUG5 2567 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 MGAM2Q2M2H8 2515 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 CCDC168Q8NDH2 2452 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 NBEAQ8NFP9 2946 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 CCDC180Q9P1Z9 1646 aa-0.27□□□□□ -2.45
MDM2-227ENST00000540709 UGGT1Q9NYU2 1555 aa-0.28□□□□□ -2.45
MDM2-227ENST00000540709 EFCAB6Q5THR3 1501 aa-0.28□□□□□ -2.45
MDM2-227ENST00000540709 ACACBO00763 2458 aa-0.28□□□□□ -2.45
MDM2-227ENST00000540709 SPART-AS1P0CW21 52 aa-0.28□□□□□ -2.45
MDM2-227ENST00000540709 MT1HP80294 61 aa-0.28□□□□□ -2.45
MDM2-227ENST00000540709 PKD1P98161 4303 aa-0.28□□□□□ -2.45
MDM2-227ENST00000540709 NBEAL2Q6ZNJ1 2754 aa-0.28□□□□□ -2.45
MDM2-227ENST00000540709 DNAH9Q9NYC9 4486 aa-0.28□□□□□ -2.46
MDM2-227ENST00000540709 A0A1B0GUL6 1792 aa-0.29□□□□□ -2.46
MDM2-227ENST00000540709 PLNP26678 52 aa-0.29□□□□□ -2.46
MDM2-227ENST00000540709 KRTAP19-5Q3LI72 72 aa-0.29□□□□□ -2.46
MDM2-227ENST00000540709 STARD9Q9P2P6 4700 aa-0.29□□□□□ -2.46
MDM2-227ENST00000540709 FAM186AA6NE01 2351 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 AKAP9Q99996 3911 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 RANBP2P49792 3224 aaKnown RBP-0.3□□□□□ -2.46
MDM2-227ENST00000540709 NBPF19A0A087WUL8 3843 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 ANK3Q12955 4377 aaKnown RBP-0.3□□□□□ -2.46
MDM2-227ENST00000540709 MAST1Q9Y2H9 1570 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 SMR3BP02814 79 aaPredicted RBP-0.3□□□□□ -2.46
MDM2-227ENST00000540709 TFF3Q07654 80 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 ABCA10Q8WWZ4 1543 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 DNAH6Q9C0G6 4158 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 UBR4Q5T4S7 5183 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 ALS2Q96Q42 1657 aa-0.3□□□□□ -2.46
MDM2-227ENST00000540709 PKHD1L1Q86WI1 4243 aa-0.31□□□□□ -2.46
MDM2-227ENST00000540709 PRXQ9BXM0 1461 aa-0.31□□□□□ -2.46
MDM2-227ENST00000540709 VPS13BQ7Z7G8 4022 aa-0.31□□□□□ -2.46
MDM2-227ENST00000540709 VPS13DQ5THJ4 4388 aa-0.31□□□□□ -2.46
MDM2-227ENST00000540709 A0A0C4DFX4 3053 aa-0.32□□□□□ -2.46
MDM2-227ENST00000540709 HERC2O95714 4834 aa-0.32□□□□□ -2.46
MDM2-227ENST00000540709 WDR87Q6ZQQ6 2873 aa-0.32□□□□□ -2.46
MDM2-227ENST00000540709 LINC01546A6NGU7 62 aa-0.32□□□□□ -2.46
MDM2-227ENST00000540709 KRTAP8-1Q8IUC2 63 aa-0.32□□□□□ -2.46
MDM2-227ENST00000540709 APOBP04114 4563 aaKnown RBP-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms