RNA–Protein interactions for RNA: ENST00000540399.1

LINC02378-201, Transcript of long intergenic non-protein coding RNA 2378, humanhuman

TSL 5 BASIC

Gene LINC02378, Length 1,003 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02378-201ENST00000540399 MUC3AQ02505 3323 aa1.19□□□□□ -2.22
LINC02378-201ENST00000540399 ASH1LQ9NR48 2969 aaKnown RBP1.19□□□□□ -2.22
LINC02378-201ENST00000540399 COL12A1Q99715 3063 aa1.19□□□□□ -2.22
LINC02378-201ENST00000540399 CELSR2Q9HCU4 2923 aa1.19□□□□□ -2.22
LINC02378-201ENST00000540399 CHD6Q8TD26 2715 aa1.18□□□□□ -2.22
LINC02378-201ENST00000540399 CHD8Q9HCK8 2581 aa1.18□□□□□ -2.22
LINC02378-201ENST00000540399 FBN2P35556 2912 aa1.18□□□□□ -2.22
LINC02378-201ENST00000540399 MMP24-AS1A0A0U1RRL7 71 aa1.18□□□□□ -2.22
LINC02378-201ENST00000540399 PTPRQQ9UMZ3 2332 aa1.18□□□□□ -2.22
LINC02378-201ENST00000540399 TRRAPQ9Y4A5 3859 aa1.18□□□□□ -2.22
LINC02378-201ENST00000540399 ZNF462Q96JM2 2506 aa1.17□□□□□ -2.22
LINC02378-201ENST00000540399 PKDREJQ9NTG1 2253 aa1.17□□□□□ -2.22
LINC02378-201ENST00000540399 A0A096LPF7 62 aa1.17□□□□□ -2.22
LINC02378-201ENST00000540399 PIEZO2Q9H5I5 2752 aa1.17□□□□□ -2.22
LINC02378-201ENST00000540399 URB1O60287 2271 aaKnown RBP1.17□□□□□ -2.22
LINC02378-201ENST00000540399 AHCTF1Q8WYP5 2266 aa1.17□□□□□ -2.22
LINC02378-201ENST00000540399 CUBNO60494 3623 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 OTOGQ6ZRI0 2925 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 APC2O95996 2303 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 CACNA1BQ00975 2339 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 FRAS1Q86XX4 4008 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 PRKDCP78527 4128 aaKnown RBP1.16□□□□□ -2.22
LINC02378-201ENST00000540399 DNAH3Q8TD57 4116 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 ANKRD17O75179 2603 aaKnown RBP1.16□□□□□ -2.22
LINC02378-201ENST00000540399 MYCBP2O75592 4640 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 K7EIL1 84 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 KRTAP10-4P60372 401 aaPredicted RBP1.16□□□□□ -2.22
LINC02378-201ENST00000540399 SSBP3-AS1Q7Z2R9 100 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 WFDC13Q8IUB5 93 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 CSMD2Q7Z408 3487 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 CEP250Q9BV73 2442 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 SACSQ9NZJ4 4579 aa1.16□□□□□ -2.22
LINC02378-201ENST00000540399 HUWE1Q7Z6Z7 4374 aaKnown RBP1.15□□□□□ -2.23
LINC02378-201ENST00000540399 WFDC10BQ8IUB3 73 aa1.15□□□□□ -2.23
LINC02378-201ENST00000540399 CRYBG3Q68DQ2 2970 aa1.15□□□□□ -2.23
LINC02378-201ENST00000540399 USP9XQ93008 2570 aaPredicted RBP1.14□□□□□ -2.23
LINC02378-201ENST00000540399 CMYA5Q8N3K9 4069 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 DNAH2Q9P225 4427 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 EP300Q09472 2414 aaPredicted RBP1.14□□□□□ -2.23
LINC02378-201ENST00000540399 PCLOQ9Y6V0 5065 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 DEFB130BP0DP73 79 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 DEFB130AP0DP74 79 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 SPRR1BP22528 89 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 DEFB105AQ8NG35 78 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 PRO0255Q9UI72 69 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 FAM186AA6NE01 2351 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 PCNX1Q96RV3 2341 aa1.14□□□□□ -2.23
LINC02378-201ENST00000540399 SPTBN1Q01082 2364 aaKnown RBP1.13□□□□□ -2.23
LINC02378-201ENST00000540399 FLG2Q5D862 2391 aaPredicted RBP1.13□□□□□ -2.23
LINC02378-201ENST00000540399 WNK1Q9H4A3 2382 aa1.13□□□□□ -2.23
LINC02378-201ENST00000540399 DEFB4AO15263 64 aa1.13□□□□□ -2.23
LINC02378-201ENST00000540399 ROS1P08922 2347 aa1.13□□□□□ -2.23
LINC02378-201ENST00000540399 PTPRZ1P23471 2315 aaPredicted RBP1.13□□□□□ -2.23
LINC02378-201ENST00000540399 NCOR1O75376 2440 aa1.13□□□□□ -2.23
LINC02378-201ENST00000540399 ANKRD11Q6UB99 2663 aaPredicted RBP1.12□□□□□ -2.23
LINC02378-201ENST00000540399 CNOT1A5YKK6 2376 aaKnown RBP1.12□□□□□ -2.23
LINC02378-201ENST00000540399 DNAH11Q96DT5 4516 aa1.12□□□□□ -2.23
LINC02378-201ENST00000540399 TENM2Q9NT68 2774 aa1.12□□□□□ -2.23
LINC02378-201ENST00000540399 DNAH6Q9C0G6 4158 aa1.12□□□□□ -2.23
LINC02378-201ENST00000540399 ZNF469Q96JG9 3925 aaPredicted RBP1.12□□□□□ -2.23
LINC02378-201ENST00000540399 DEFB131BA0A096LNP1 70 aa1.12□□□□□ -2.23
LINC02378-201ENST00000540399 UBE2DNLQ8IWF7 75 aa1.12□□□□□ -2.23
LINC02378-201ENST00000540399 LYSTQ99698 3801 aa1.12□□□□□ -2.23
LINC02378-201ENST00000540399 TEP1Q99973 2627 aaKnown RBP1.12□□□□□ -2.23
LINC02378-201ENST00000540399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.11□□□□□ -2.23
LINC02378-201ENST00000540399 DNAH7Q8WXX0 4024 aa1.11□□□□□ -2.23
LINC02378-201ENST00000540399 H0YAA0 97 aa1.11□□□□□ -2.23
LINC02378-201ENST00000540399 PRLHP81277 87 aa1.11□□□□□ -2.23
LINC02378-201ENST00000540399 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
LINC02378-201ENST00000540399 CSMD3Q7Z407 3707 aa1.11□□□□□ -2.23
LINC02378-201ENST00000540399 MAP1AP78559 2803 aaPredicted RBP1.11□□□□□ -2.23
LINC02378-201ENST00000540399 KIAA1109Q2LD37 5005 aa1.1□□□□□ -2.23
LINC02378-201ENST00000540399 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
LINC02378-201ENST00000540399 HECTD4Q9Y4D8 3996 aa1.1□□□□□ -2.23
LINC02378-201ENST00000540399 A0A096LNI7 61 aa1.1□□□□□ -2.23
LINC02378-201ENST00000540399 DEFB135Q30KP9 77 aa1.1□□□□□ -2.23
LINC02378-201ENST00000540399 WNK2Q9Y3S1 2297 aa1.09□□□□□ -2.23
LINC02378-201ENST00000540399 NIPBLQ6KC79 2804 aaeCLIP1.09□□□□□ -2.23
LINC02378-201ENST00000540399 NAV2Q8IVL1 2488 aa1.09□□□□□ -2.23
LINC02378-201ENST00000540399 PLECQ15149 4684 aaKnown RBP1.09□□□□□ -2.23
LINC02378-201ENST00000540399 LINC01556Q5JQF7 62 aa1.09□□□□□ -2.23
LINC02378-201ENST00000540399 DEFB123Q8N688 67 aa1.09□□□□□ -2.23
LINC02378-201ENST00000540399 DNAH5Q8TE73 4624 aa1.09□□□□□ -2.24
LINC02378-201ENST00000540399 ANKHD1Q8IWZ3 2542 aaKnown RBP1.09□□□□□ -2.24
LINC02378-201ENST00000540399 FLNBO75369 2602 aaKnown RBP1.08□□□□□ -2.24
LINC02378-201ENST00000540399 PTPN13Q12923 2485 aa1.08□□□□□ -2.24
LINC02378-201ENST00000540399 MRPL34Q9BQ48 92 aaKnown RBP1.08□□□□□ -2.24
LINC02378-201ENST00000540399 MYO18BQ8IUG5 2567 aa1.08□□□□□ -2.24
LINC02378-201ENST00000540399 MXRA5Q9NR99 2828 aa1.08□□□□□ -2.24
LINC02378-201ENST00000540399 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
LINC02378-201ENST00000540399 MAP1BP46821 2468 aaKnown RBP1.08□□□□□ -2.24
LINC02378-201ENST00000540399 ITPR1Q14643 2758 aa1.08□□□□□ -2.24
LINC02378-201ENST00000540399 EPG5Q9HCE0 2579 aa1.07□□□□□ -2.24
LINC02378-201ENST00000540399 ITPR3Q14573 2671 aa1.07□□□□□ -2.24
LINC02378-201ENST00000540399 H3BNG1 76 aa1.07□□□□□ -2.24
LINC02378-201ENST00000540399 HTN3P15516 51 aa1.07□□□□□ -2.24
LINC02378-201ENST00000540399 TP53AIP1Q9HCN2 124 aa1.07□□□□□ -2.24
LINC02378-201ENST00000540399 NF1P21359 2839 aa1.07□□□□□ -2.24
LINC02378-201ENST00000540399 ZANQ9Y493 2812 aa1.07□□□□□ -2.24
LINC02378-201ENST00000540399 LRP1BQ9NZR2 4599 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms