RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 FAM229AH3BQW9 127 aa6.11□□□□□ -1.43
GPD2-213ENST00000540309 Q5W150 140 aa6.1□□□□□ -1.43
GPD2-213ENST00000540309 UQCR11O14957 56 aa6.09□□□□□ -1.43
GPD2-213ENST00000540309 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
GPD2-213ENST00000540309 UBE2DNLQ8IWF7 75 aa6.09□□□□□ -1.43
GPD2-213ENST00000540309 APLNQ9ULZ1 77 aa6.09□□□□□ -1.43
GPD2-213ENST00000540309 ZNF861PO60384 105 aa6.08□□□□□ -1.44
GPD2-213ENST00000540309 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
GPD2-213ENST00000540309 TGP01266 2768 aa6.08□□□□□ -1.44
GPD2-213ENST00000540309 IGLV5-52A0A0A0MRZ9 124 aa6.07□□□□□ -1.44
GPD2-213ENST00000540309 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
GPD2-213ENST00000540309 Q6ZRN7 208 aaPredicted RBP6.06□□□□□ -1.44
GPD2-213ENST00000540309 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
GPD2-213ENST00000540309 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
GPD2-213ENST00000540309 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
GPD2-213ENST00000540309 MEGF8Q7Z7M0 2845 aa6.05□□□□□ -1.44
GPD2-213ENST00000540309 NBDYA0A0U1RRE5 68 aa6.04□□□□□ -1.44
GPD2-213ENST00000540309 PANO1I0J062 215 aa6.04□□□□□ -1.44
GPD2-213ENST00000540309 K7EIL1 84 aa6.04□□□□□ -1.44
GPD2-213ENST00000540309 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
GPD2-213ENST00000540309 KRTAP24-1Q3LI83 254 aa6.02□□□□□ -1.45
GPD2-213ENST00000540309 C4orf48Q5BLP8 95 aa6.02□□□□□ -1.45
GPD2-213ENST00000540309 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
GPD2-213ENST00000540309 CMYA5Q8N3K9 4069 aa6.02□□□□□ -1.45
GPD2-213ENST00000540309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
GPD2-213ENST00000540309 PRAC1Q96KF2 57 aa6□□□□□ -1.45
GPD2-213ENST00000540309 HUWE1Q7Z6Z7 4374 aaKnown RBP6□□□□□ -1.45
GPD2-213ENST00000540309 DNAH10Q8IVF4 4471 aa5.99□□□□□ -1.45
GPD2-213ENST00000540309 LYSTQ99698 3801 aa5.98□□□□□ -1.45
GPD2-213ENST00000540309 DNAH9Q9NYC9 4486 aa5.97□□□□□ -1.45
GPD2-213ENST00000540309 DYNC2H1Q8NCM8 4307 aaKnown RBP5.96□□□□□ -1.46
GPD2-213ENST00000540309 SPINK6Q6UWN8 80 aa5.96□□□□□ -1.46
GPD2-213ENST00000540309 A0A087WTM6 91 aa5.95□□□□□ -1.46
GPD2-213ENST00000540309 NUPR2A6NF83 97 aa5.95□□□□□ -1.46
GPD2-213ENST00000540309 IGLV7-43P04211 117 aa5.95□□□□□ -1.46
GPD2-213ENST00000540309 MGAM2Q2M2H8 2515 aa5.95□□□□□ -1.46
GPD2-213ENST00000540309 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
GPD2-213ENST00000540309 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
GPD2-213ENST00000540309 LCE2BO14633 110 aa5.93□□□□□ -1.46
GPD2-213ENST00000540309 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
GPD2-213ENST00000540309 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
GPD2-213ENST00000540309 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
GPD2-213ENST00000540309 ANAPC11Q9NYG5 84 aa5.9□□□□□ -1.46
GPD2-213ENST00000540309 NOTCH1P46531 2555 aa5.89□□□□□ -1.47
GPD2-213ENST00000540309 LY6G6CO95867 125 aa5.88□□□□□ -1.47
GPD2-213ENST00000540309 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
GPD2-213ENST00000540309 DNAH8Q96JB1 4490 aa5.86□□□□□ -1.47
GPD2-213ENST00000540309 KMT2CQ8NEZ4 4911 aaKnown RBP5.86□□□□□ -1.47
GPD2-213ENST00000540309 RYR3Q15413 4870 aa5.84□□□□□ -1.47
GPD2-213ENST00000540309 STAB2Q8WWQ8 2551 aa5.83□□□□□ -1.48
GPD2-213ENST00000540309 A8MUU9 505 aa5.81□□□□□ -1.48
GPD2-213ENST00000540309 H3BS24 57 aa5.8□□□□□ -1.48
GPD2-213ENST00000540309 COL7A1Q02388 2944 aa5.8□□□□□ -1.48
GPD2-213ENST00000540309 HECTD4Q9Y4D8 3996 aa5.79□□□□□ -1.48
GPD2-213ENST00000540309 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
GPD2-213ENST00000540309 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
GPD2-213ENST00000540309 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
GPD2-213ENST00000540309 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
GPD2-213ENST00000540309 KRTAP13-2Q52LG2 175 aa5.77□□□□□ -1.49
GPD2-213ENST00000540309 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
GPD2-213ENST00000540309 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.49
GPD2-213ENST00000540309 RPS29P62273 56 aaKnown RBP5.76□□□□□ -1.49
GPD2-213ENST00000540309 Q6ZSA8 131 aa5.75□□□□□ -1.49
GPD2-213ENST00000540309 DNAH7Q8WXX0 4024 aa5.75□□□□□ -1.49
GPD2-213ENST00000540309 SPINK1P00995 79 aa5.75□□□□□ -1.49
GPD2-213ENST00000540309 PLECQ15149 4684 aaKnown RBP5.74□□□□□ -1.49
GPD2-213ENST00000540309 H0YAA0 97 aa5.73□□□□□ -1.49
GPD2-213ENST00000540309 C1orf134Q5TEV5 83 aa5.73□□□□□ -1.49
GPD2-213ENST00000540309 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
GPD2-213ENST00000540309 A0A1B0GU33 70 aa5.71□□□□□ -1.49
GPD2-213ENST00000540309 FRAS1Q86XX4 4008 aa5.71□□□□□ -1.5
GPD2-213ENST00000540309 ROMO1P60602 79 aa5.71□□□□□ -1.5
GPD2-213ENST00000540309 K7ERS5 55 aa5.69□□□□□ -1.5
GPD2-213ENST00000540309 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
GPD2-213ENST00000540309 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
GPD2-213ENST00000540309 EPPK1P58107 5090 aaKnown RBP5.65□□□□□ -1.51
GPD2-213ENST00000540309 Q8N1X5 172 aa5.65□□□□□ -1.51
GPD2-213ENST00000540309 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
GPD2-213ENST00000540309 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
GPD2-213ENST00000540309 DNAH2Q9P225 4427 aa5.62□□□□□ -1.51
GPD2-213ENST00000540309 TYMSOSQ8TAI1 123 aa5.62□□□□□ -1.51
GPD2-213ENST00000540309 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
GPD2-213ENST00000540309 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
GPD2-213ENST00000540309 DNAH11Q96DT5 4516 aa5.56□□□□□ -1.52
GPD2-213ENST00000540309 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
GPD2-213ENST00000540309 DNAH6Q9C0G6 4158 aa5.55□□□□□ -1.52
GPD2-213ENST00000540309 RYR2Q92736 4967 aa5.55□□□□□ -1.52
GPD2-213ENST00000540309 KRTAP10-2P60368 255 aa5.55□□□□□ -1.52
GPD2-213ENST00000540309 COX6B2Q6YFQ2 88 aa5.55□□□□□ -1.52
GPD2-213ENST00000540309 SACSQ9NZJ4 4579 aa5.54□□□□□ -1.52
GPD2-213ENST00000540309 KRTAP10-1P60331 282 aa5.51□□□□□ -1.53
GPD2-213ENST00000540309 KMT2AQ03164 3969 aa5.51□□□□□ -1.53
GPD2-213ENST00000540309 RPL37P61927 97 aaKnown RBP5.5□□□□□ -1.53
GPD2-213ENST00000540309 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
GPD2-213ENST00000540309 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
GPD2-213ENST00000540309 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.54
GPD2-213ENST00000540309 P0C880 135 aa5.45□□□□□ -1.54
GPD2-213ENST00000540309 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
GPD2-213ENST00000540309 RYR1P21817 5038 aa5.42□□□□□ -1.54
GPD2-213ENST00000540309 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms