RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 Q6ZQY7 126 aa9.2□□□□□ -0.94
DDB1-216ENST00000539739 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
DDB1-216ENST00000539739 ABCA13Q86UQ4 5058 aa9.18□□□□□ -0.94
DDB1-216ENST00000539739 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
DDB1-216ENST00000539739 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
DDB1-216ENST00000539739 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
DDB1-216ENST00000539739 SPRR1BP22528 89 aa9.16□□□□□ -0.94
DDB1-216ENST00000539739 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
DDB1-216ENST00000539739 BPY2O14599 106 aa9.16□□□□□ -0.94
DDB1-216ENST00000539739 A0A087X002 238 aa9.15□□□□□ -0.94
DDB1-216ENST00000539739 MYCBP2O75592 4640 aa9.14□□□□□ -0.95
DDB1-216ENST00000539739 TRAV22A0A0B4J277 110 aa9.13□□□□□ -0.95
DDB1-216ENST00000539739 Q8N377 158 aa9.13□□□□□ -0.95
DDB1-216ENST00000539739 TYMSOSQ8TAI1 123 aa9.13□□□□□ -0.95
DDB1-216ENST00000539739 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
DDB1-216ENST00000539739 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
DDB1-216ENST00000539739 J3QL48 77 aa9.12□□□□□ -0.95
DDB1-216ENST00000539739 IGLV9-49A0A0B4J1Y8 123 aa9.11□□□□□ -0.95
DDB1-216ENST00000539739 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
DDB1-216ENST00000539739 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
DDB1-216ENST00000539739 LCA10Q71F78 164 aa9.11□□□□□ -0.95
DDB1-216ENST00000539739 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
DDB1-216ENST00000539739 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
DDB1-216ENST00000539739 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
DDB1-216ENST00000539739 MT1HL1P0DM35 61 aa9.08□□□□□ -0.96
DDB1-216ENST00000539739 MOBPQ13875 183 aa9.08□□□□□ -0.96
DDB1-216ENST00000539739 SMIM29Q86T20 159 aa9.08□□□□□ -0.96
DDB1-216ENST00000539739 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
DDB1-216ENST00000539739 C1orf64Q8NEQ6 169 aa9.07□□□□□ -0.96
DDB1-216ENST00000539739 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
DDB1-216ENST00000539739 Q8NBF4 154 aa9.06□□□□□ -0.96
DDB1-216ENST00000539739 NDUFB1O75438 58 aa9.05□□□□□ -0.96
DDB1-216ENST00000539739 A6NN06 94 aa9.05□□□□□ -0.96
DDB1-216ENST00000539739 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
DDB1-216ENST00000539739 Q5VV11 94 aa9.02□□□□□ -0.96
DDB1-216ENST00000539739 TNXBP22105 4242 aa9.01□□□□□ -0.97
DDB1-216ENST00000539739 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
DDB1-216ENST00000539739 DMBT1Q9UGM3 2413 aaPredicted RBP9.01□□□□□ -0.97
DDB1-216ENST00000539739 H3BS24 57 aa9□□□□□ -0.97
DDB1-216ENST00000539739 PSPHP1O15172 72 aa9□□□□□ -0.97
DDB1-216ENST00000539739 ZCCHC13Q8WW36 166 aaKnown RBP9□□□□□ -0.97
DDB1-216ENST00000539739 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
DDB1-216ENST00000539739 A0A1B0GW54 56 aa8.98□□□□□ -0.97
DDB1-216ENST00000539739 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
DDB1-216ENST00000539739 Q75L30 129 aa8.98□□□□□ -0.97
DDB1-216ENST00000539739 A8MUN3 132 aa8.97□□□□□ -0.97
DDB1-216ENST00000539739 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
DDB1-216ENST00000539739 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
DDB1-216ENST00000539739 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
DDB1-216ENST00000539739 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
DDB1-216ENST00000539739 CHKB-CPT1BH3BT56 60 aa8.94□□□□□ -0.98
DDB1-216ENST00000539739 SPINK1P00995 79 aa8.94□□□□□ -0.98
DDB1-216ENST00000539739 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
DDB1-216ENST00000539739 IGFL1Q6UW32 110 aa8.93□□□□□ -0.98
DDB1-216ENST00000539739 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
DDB1-216ENST00000539739 SPANXA2-OT1Q8N9U9 137 aa8.91□□□□□ -0.98
DDB1-216ENST00000539739 RPS29P62273 56 aaKnown RBP8.89□□□□□ -0.99
DDB1-216ENST00000539739 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
DDB1-216ENST00000539739 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
DDB1-216ENST00000539739 H3BPC8 53 aa8.85□□□□□ -0.99
DDB1-216ENST00000539739 A0A1W2PNM2 257 aa8.82□□□□□ -1
DDB1-216ENST00000539739 A6NED7 52 aa8.81□□□□□ -1
DDB1-216ENST00000539739 LINC00208Q96KT6 92 aa8.8□□□□□ -1
DDB1-216ENST00000539739 PRR15LQ9BU68 103 aa8.8□□□□□ -1
DDB1-216ENST00000539739 LINC01554Q52M75 96 aa8.78□□□□□ -1
DDB1-216ENST00000539739 A0A087WSZ3 146 aa8.77□□□□□ -1.01
DDB1-216ENST00000539739 RETNLBQ9BQ08 111 aa8.76□□□□□ -1.01
DDB1-216ENST00000539739 MP68P56378 58 aa8.75□□□□□ -1.01
DDB1-216ENST00000539739 A8MU10 97 aa8.74□□□□□ -1.01
DDB1-216ENST00000539739 PRR4Q16378 134 aa8.74□□□□□ -1.01
DDB1-216ENST00000539739 HERC1Q15751 4861 aa8.74□□□□□ -1.01
DDB1-216ENST00000539739 CASC2Q6XLA1 102 aa8.73□□□□□ -1.01
DDB1-216ENST00000539739 LINC01558Q9Y6Z2 57 aa8.72□□□□□ -1.01
DDB1-216ENST00000539739 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
DDB1-216ENST00000539739 Q8N9L7 120 aa8.67□□□□□ -1.02
DDB1-216ENST00000539739 LINC00313P59037 77 aa8.65□□□□□ -1.03
DDB1-216ENST00000539739 Q96NJ1 140 aa8.62□□□□□ -1.03
DDB1-216ENST00000539739 LINC00472Q9H8W2 130 aa8.61□□□□□ -1.03
DDB1-216ENST00000539739 TPRXLQ17RH7 258 aa8.58□□□□□ -1.04
DDB1-216ENST00000539739 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
DDB1-216ENST00000539739 COA5Q86WW8 74 aa8.56□□□□□ -1.04
DDB1-216ENST00000539739 HMCN2Q8NDA2 5059 aa8.55□□□□□ -1.04
DDB1-216ENST00000539739 KRTAP13-3Q3SY46 172 aa8.54□□□□□ -1.04
DDB1-216ENST00000539739 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
DDB1-216ENST00000539739 DSCR10P59022 87 aa8.52□□□□□ -1.05
DDB1-216ENST00000539739 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
DDB1-216ENST00000539739 H0Y9P7 68 aa8.47□□□□□ -1.05
DDB1-216ENST00000539739 LPAP08519 4548 aa8.47□□□□□ -1.05
DDB1-216ENST00000539739 IGHV6-1A0A0B4J1U7 121 aa8.47□□□□□ -1.05
DDB1-216ENST00000539739 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
DDB1-216ENST00000539739 A8MWP4 228 aa8.47□□□□□ -1.05
DDB1-216ENST00000539739 K7EQZ3 153 aa8.45□□□□□ -1.06
DDB1-216ENST00000539739 XP32Q5T750 250 aa8.43□□□□□ -1.06
DDB1-216ENST00000539739 LRP2P98164 4655 aa8.42□□□□□ -1.06
DDB1-216ENST00000539739 SPINK7P58062 85 aa8.41□□□□□ -1.06
DDB1-216ENST00000539739 PRAC1Q96KF2 57 aa8.4□□□□□ -1.06
DDB1-216ENST00000539739 NOTCH2NLQ7Z3S9 236 aa8.38□□□□□ -1.07
DDB1-216ENST00000539739 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
DDB1-216ENST00000539739 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
DDB1-216ENST00000539739 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms