RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ZNF706Q9Y5V0 76 aaPredicted RBP10.56□□□□□ -0.72
RAB40C-205ENST00000539661 SPINK7P58062 85 aa10.55□□□□□ -0.72
RAB40C-205ENST00000539661 PANO1I0J062 215 aa10.52□□□□□ -0.73
RAB40C-205ENST00000539661 APLNQ9ULZ1 77 aa10.52□□□□□ -0.73
RAB40C-205ENST00000539661 WWC2-AS2Q96NR7 200 aa10.51□□□□□ -0.73
RAB40C-205ENST00000539661 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
RAB40C-205ENST00000539661 A0A087X002 238 aa10.46□□□□□ -0.74
RAB40C-205ENST00000539661 KRTAP13-3Q3SY46 172 aa10.46□□□□□ -0.74
RAB40C-205ENST00000539661 NOTCH2NLQ7Z3S9 236 aa10.46□□□□□ -0.74
RAB40C-205ENST00000539661 ACYP2P14621 99 aa10.44□□□□□ -0.74
RAB40C-205ENST00000539661 PRR26Q8N8Z3 221 aa10.43□□□□□ -0.74
RAB40C-205ENST00000539661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.43□□□□□ -0.74
RAB40C-205ENST00000539661 NBDYA0A0U1RRE5 68 aa10.42□□□□□ -0.74
RAB40C-205ENST00000539661 Q6ZRN7 208 aaPredicted RBP10.42□□□□□ -0.74
RAB40C-205ENST00000539661 Q5W150 140 aa10.41□□□□□ -0.74
RAB40C-205ENST00000539661 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
RAB40C-205ENST00000539661 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
RAB40C-205ENST00000539661 DNAH2Q9P225 4427 aa10.38□□□□□ -0.75
RAB40C-205ENST00000539661 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
RAB40C-205ENST00000539661 ZNF861PO60384 105 aa10.37□□□□□ -0.75
RAB40C-205ENST00000539661 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
RAB40C-205ENST00000539661 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
RAB40C-205ENST00000539661 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
RAB40C-205ENST00000539661 FBN3Q75N90 2809 aa10.35□□□□□ -0.75
RAB40C-205ENST00000539661 C8orf87E5RJ46 101 aa10.35□□□□□ -0.75
RAB40C-205ENST00000539661 ALMS1Q8TCU4 4167 aa10.32□□□□□ -0.76
RAB40C-205ENST00000539661 ANAPC11Q9NYG5 84 aa10.32□□□□□ -0.76
RAB40C-205ENST00000539661 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
RAB40C-205ENST00000539661 LINC00313P59037 77 aa10.28□□□□□ -0.76
RAB40C-205ENST00000539661 HECTD4Q9Y4D8 3996 aa10.28□□□□□ -0.76
RAB40C-205ENST00000539661 A0A087WTM6 91 aa10.26□□□□□ -0.77
RAB40C-205ENST00000539661 A0A1B0GU69 56 aa10.26□□□□□ -0.77
RAB40C-205ENST00000539661 FAM229AH3BQW9 127 aa10.26□□□□□ -0.77
RAB40C-205ENST00000539661 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
RAB40C-205ENST00000539661 SPATA8Q6RVD6 105 aa10.25□□□□□ -0.77
RAB40C-205ENST00000539661 DNAH6Q9C0G6 4158 aa10.25□□□□□ -0.77
RAB40C-205ENST00000539661 NUPR2A6NF83 97 aa10.23□□□□□ -0.77
RAB40C-205ENST00000539661 RTL8CO15255 209 aa10.22□□□□□ -0.77
RAB40C-205ENST00000539661 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
RAB40C-205ENST00000539661 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.78
RAB40C-205ENST00000539661 HYDINQ4G0P3 5121 aa10.21□□□□□ -0.78
RAB40C-205ENST00000539661 IGKV2-30P06310 120 aa10.2□□□□□ -0.78
RAB40C-205ENST00000539661 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
RAB40C-205ENST00000539661 UQCR11O14957 56 aa10.16□□□□□ -0.78
RAB40C-205ENST00000539661 DNAH8Q96JB1 4490 aa10.16□□□□□ -0.78
RAB40C-205ENST00000539661 PRAC1Q96KF2 57 aa10.15□□□□□ -0.78
RAB40C-205ENST00000539661 DNAH17Q9UFH2 4485 aa10.15□□□□□ -0.78
RAB40C-205ENST00000539661 MIR22HGQ0VDD5 57 aa10.14□□□□□ -0.79
RAB40C-205ENST00000539661 ADM2Q7Z4H4 148 aa10.09□□□□□ -0.79
RAB40C-205ENST00000539661 DNAH11Q96DT5 4516 aa10.06□□□□□ -0.8
RAB40C-205ENST00000539661 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
RAB40C-205ENST00000539661 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
RAB40C-205ENST00000539661 KRTAP16-1A8MUX0 517 aa10.05□□□□□ -0.8
RAB40C-205ENST00000539661 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
RAB40C-205ENST00000539661 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
RAB40C-205ENST00000539661 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
RAB40C-205ENST00000539661 LY6G6CO95867 125 aa9.98□□□□□ -0.81
RAB40C-205ENST00000539661 KRTAP13-2Q52LG2 175 aa9.95□□□□□ -0.82
RAB40C-205ENST00000539661 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
RAB40C-205ENST00000539661 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
RAB40C-205ENST00000539661 LRP1BQ9NZR2 4599 aa9.91□□□□□ -0.82
RAB40C-205ENST00000539661 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
RAB40C-205ENST00000539661 PKD1P98161 4303 aa9.88□□□□□ -0.83
RAB40C-205ENST00000539661 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
RAB40C-205ENST00000539661 KRTAP21-3Q3LHN1 58 aa9.85□□□□□ -0.83
RAB40C-205ENST00000539661 KRTAP10-2P60368 255 aa9.85□□□□□ -0.83
RAB40C-205ENST00000539661 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
RAB40C-205ENST00000539661 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.85
RAB40C-205ENST00000539661 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.85
RAB40C-205ENST00000539661 SPINK1P00995 79 aa9.76□□□□□ -0.85
RAB40C-205ENST00000539661 Q8N1X5 172 aa9.73□□□□□ -0.85
RAB40C-205ENST00000539661 Q6ZSA8 131 aa9.72□□□□□ -0.85
RAB40C-205ENST00000539661 H3BS24 57 aa9.71□□□□□ -0.86
RAB40C-205ENST00000539661 A8MUU9 505 aa9.7□□□□□ -0.86
RAB40C-205ENST00000539661 KMT2CQ8NEZ4 4911 aaKnown RBP9.69□□□□□ -0.86
RAB40C-205ENST00000539661 H0YAA0 97 aa9.68□□□□□ -0.86
RAB40C-205ENST00000539661 TYMSOSQ8TAI1 123 aa9.67□□□□□ -0.86
RAB40C-205ENST00000539661 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
RAB40C-205ENST00000539661 FAT1Q14517 4588 aa9.63□□□□□ -0.87
RAB40C-205ENST00000539661 RPS29P62273 56 aaKnown RBP9.63□□□□□ -0.87
RAB40C-205ENST00000539661 A0A1B0GU33 70 aa9.61□□□□□ -0.87
RAB40C-205ENST00000539661 KRTAP25-1Q3LHN0 102 aa9.6□□□□□ -0.87
RAB40C-205ENST00000539661 LINC00304Q8N9R0 145 aa9.6□□□□□ -0.87
RAB40C-205ENST00000539661 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
RAB40C-205ENST00000539661 DYNC1H1Q14204 4646 aaKnown RBP9.53□□□□□ -0.88
RAB40C-205ENST00000539661 C20orf166-AS1Q96NR2 134 aa9.52□□□□□ -0.89
RAB40C-205ENST00000539661 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
RAB40C-205ENST00000539661 SMR3BP02814 79 aaPredicted RBP9.46□□□□□ -0.9
RAB40C-205ENST00000539661 K7ERS5 55 aa9.45□□□□□ -0.9
RAB40C-205ENST00000539661 ROMO1P60602 79 aa9.43□□□□□ -0.9
RAB40C-205ENST00000539661 RYR2Q92736 4967 aa9.43□□□□□ -0.9
RAB40C-205ENST00000539661 APOBP04114 4563 aaKnown RBP9.39□□□□□ -0.91
RAB40C-205ENST00000539661 C9orf92A6NGG3 77 aa9.37□□□□□ -0.91
RAB40C-205ENST00000539661 RYR3Q15413 4870 aa9.36□□□□□ -0.91
RAB40C-205ENST00000539661 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
RAB40C-205ENST00000539661 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
RAB40C-205ENST00000539661 RPL37P61927 97 aaKnown RBP9.2□□□□□ -0.94
RAB40C-205ENST00000539661 CRIPTQ9P021 101 aa9.2□□□□□ -0.94
RAB40C-205ENST00000539661 PKHD1L1Q86WI1 4243 aa9.2□□□□□ -0.94
RAB40C-205ENST00000539661 FLG2Q5D862 2391 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms